XLOC_024125 (gene) - C. hemisphaerica

Overview
NameXLOC_024125
Unique NameXLOC_024125
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002223:10080..19373+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024125 ID=XLOC_024125|Name=XLOC_024125|organism=Clytia hemisphaerica|type=gene|length=9294bp|location=Sequence derived from alignment at sc0002223:10080..19373+ (Clytia hemisphaerica)
tctgacggtaaattattctcctgggaatagtgcagccaaaatgacgtcat gtttcaaatcaaaacattgatttcAACCCCCTGGCCTGATTAATAGCGGC AAAATCTTGTTTTTACTAACGTCTTGCCCTGGACGTTGTAGATCAAAACA ggggttttaatattttcttgcacTGGAAAGAAAGTATGAGGttataatta ctgctttcaattGTGTGTTTAATGTgtgtcttcgtggaattttttgattg aatcaaAACATATATTTGAAAACCAATATGATATTgattttggactttgt tattgATCGTGGACTAGGACTATAATTATATACTGCAAAGACCCCAGTTG TAAACTCTGACCTGAGAGACAAAATTAAACTTTCAAGGTGAATGtatttg taaaaatttataTTGAAGTATATTTTCAATATAAGATCTTTATTCTTTCT TCCTTTTATCATGATGTATTTTTCTATTGCATCTCCCCTTTGAATTCTCC TCAGGGCTTTAACACCAGCATTCCAGGTATAAAAACATATCCCTTTTTCA TAAAGTTCATGTTTTATAAAACAGATATTCATTTTGTTTCCTGTACAATG ATTATGTTTAAGGTTTAAAATAATGACTGGAACACAAAGAACATTCAGAA AGAAAGTTGTCAAAGTTAAAAGCACAAAAATAAGAAATGGTAGAAAAAGG ACTACTTATGTCCAACCTTTCATGAGCAGTTCATCTCAATCAAAGTACTT GAAAAATGAGTCTTTCAGTCCTTGTATATCTGGGGATGAGGATGAGAGCT CAAAAGAGGATAACTTTGTCACTGATTCAGTAAACAAAACAAACGATGAT TCAAAAAGGTCAAAGTACCAGACAATGAAGGAAAAGGAGCTTGGGGCATG GGATACCTTCTCACCTGAAGTGATAAGGAAGTACGCAGAGAAGTTCGATG AAATGCTACCCACAATATGTGTTATCTGTGAAACAAAATTACTTGAAAAT TGTGTATGGTGCAAAACATGTGGGCCAAGAACCACATATTGCAGTGGATG TGCTGTTAAGATCCATAAGCACATGCCTTTTCATTGTCTGTATGAAATAA ATGTAAGTATTCTAATCCTAGAGTAACTGGTAATAGGGTATACTCTTGGG TCTCAAATGAAATAAACATACAGGtacatttaaaataaattaagaTTATT TTTGAGGTCTTTATGATAACCCAacttgattctttttttgtgaAGCTGGA CCCTTGCCTGATTACATATTGAGATAATTTTTTGCTCAGGGCTGAAGTGG TCAAAGGGATTTCATATTTTGATACCAACGGATGGATTTCTGTTTCAGGG CTGGAGCCTTAGCAGCTTAGGTTGCTTATGAAAGTAATGTATAGAAAAAG CGTTCTCTTCTAGAAAGCATGGAATGTACAGGAAAGTAGTTGCAGATTTC TTTCCTGTCATTTGCGCTAGATTCAGGGTTTAGTGGTCTTTTGAAGAAGT GACAATAATCAGACTGGccatcaaaaaacttttgatttatATAATTTCTT CCTAATCTATTTGAAGGATGATGGGTTTCACgaatttcaagtcaattatG AGCTGAAAAGCAAACATACAAGCCAATGTCTGTATGCCAAGCCTAGATTA TTGACAGTAATTTCAGAAACAGGTATTAAAAATCCTTTACATGTCATTAC TTTAAAGGATCACATGGTGTCATGCAAGTTTTTTGGGTCCCCCATCCGGT GTTGAAAACCCCCATCTGGCTTTCCTTCCCCATTACTGTTTGATTTCTGG TCTCTCGATCTGAAAATTACTTATATAAAGTTGTTGGTTCACATCAAAAT GAATTATAAATGATAAATTCATGCAAAAACATTATacaaaaaaagatatt catgTAATCAATAAGTAAGATTGATACCTTTCTTTGATGTTTaccttgga aaaaaaattcatccccTCCCAGACCAACAATGTGATATTAATTTATTCTC TGATAAAAACAGGCTACCTGATAATCTAATTAAATTGTTCATGCAAATAt ccttttgaaagttttaaaactttGGGTCTATGGTTCTTTTTTTAAACGTT ATGATTTTTCATAGTTACAGAATTTCAGCATTATGTTCTATAAGACATAG ATACAAATAGGGGGGAAAGATAAAATctatatatttgaataatttttttt caaaattacgtCATCTTTTCTAGGACTACATCATCAGTGCTCTATCTATT TTTGTGAATGTGAAAGTGATTTGGAAACACTACTTCGTCTTGACTTGTGG CCTGTGACTCCAATCAAACCAAATACGGTGGTGTCTATAGATCTCCTACA CCTTTTCATCTCGTTGCAGTTGGAGGGGAAGAtatcttttcattcttttt gtgaTGGTCTAGCGTGGAAAAAAGGAATGGGAAACACTGTCTTGGTAAAT ATTTTCATGATAAACTAGTATTAGTtgcccttcgtggaaacaattttTTA GGTGTCTAAAGGATACTGAATATTCGGAGCATGCCACTTAAAAtatatgt tattattattactttgcttgatttattttttaataaatagGCTCTTACAC TCGTTGAGATATTTTCAATTATTCTTGTTTTCTGGCGCttgagtttttat ttttatttttagagaaGATATCTAAATCGTTTGGAGAAGACTGACACTAT CGATCAGTTTAGGAACTTTCGGAGGCAACTTCTTAACCTCAGAAGCATTT GTGAAGACTTCACTGGACTAGAAGAGTGTGCTGCTTGTCCCAAAGTAAGA ATTACTTTTACACATGCTTTGATCAGAGTGGAACCACTAAGGTGCATAAC ATTGTTGACACTAAGGAACACATTTTAATAAGCAAACCTATTATTTTCTG GCTCATTGCTAAGGTCGCTAAGATTTTTGTCAAACTCAAGGTTGCAGTTG TTGCTCAATAGGCCACTAAGGTTTTCTCTTGTTCATGTTGTGAACATCTG TTGTTGAAGAAGAAGTTGCTTTGCTTATCAAAGGCTCAGAGTACAGCAAA TTTATGAGCAAGGCCAACCTTAGCAACTAGCTTGCTTTAAGTAAAATAAT GTGTATTAAAGAAGGAATATCAACTTTCGTTTAGGAAGACGGCAGTGTGT TCTATTGTTTAGATGCAAACTTTGGTCTAGTACTCAAAGCGTCTGCTTCC AAATCAAAGAAACTTGCGATGCGATCTTCCAATTTATTTGTTCCTGATGA AGATATCGATTCATTCATGGTGAACTATGATGATGCTTTAAAAACAAAGG TGAgatttttattctattttaaaaAGCAGCGATGCCTAAACATATTTTAA TTTATTAAATTCTCTAGGAGTgacctttaaaatttttcaaaatcaaatca aagcaATCTTAATCTAAGAAGCTGTgaaattaatattttgaccTATAAAA ATTGAGATGCTATGAGTCCTCATGAGTCCTTATATGTTCTGATATACTGT GTTACAAAATATTATAATTGAAAGTCATTGTAGTTCTTTAGGAACTTCTT ACTAGGATTGCAGTAACTTCCAAGCCGGAAACAATCTTCGatcgaaaaga aaaacaaagaaattaagTGTTACCGGAATTTTCGGAATGTCTTGTAGACA CGAATTTCCAAAACTCTTCCTAAATATGAGGCATGGTGAAAGGTATTAAA ATGAGTTGAATTTTATCCCCAACAATTAAATTGAATCTCAAGGAGAATAG AATCAAATACAATTTTaatgaagtttgaaaaaagaatttctttccAAGAT CTTCAGATCCATTTTAAGCGCTTGAATCTTGGCAACTTGGTTacttataa aaataacgtgTAGTATAATTCCTTAGAAATGAATATTTGTGGGAAGATAT TTTCCCGAAAGCAATCTTTGTGGAACTGCTCTGAAATCATAAATCGATCC TAAATCTGGTCTTTCTTGGACAAAGTTCATctgcaaaattttggcaaaaa taaatTAACGAAATTTAAGCCAGGGTGAGCTCATTTTCCATATGCTACTC TTTGGTGCTTAATTTTAGGGGACAATAGAATAAGCGGGACGGGTGGGTAC TCGagaataaaatcaacaaaatcggGGAGGGGTCATAATGTGTCTGATTG GGGCCTGATTGTGCTGAAGATTCCTTGGAATCTTGGAAAATGAAGCTTTT AACCCTTTTTTGGTACTTCGTAGgataaaagtcataaaatgggAGGTCAT TATTAATGATATCGGGGTTGAAAAATTATTGTAcatcatataaaaatttt caggctGGGATATGCTGTGTATTTACTTGACCGTTTGTTGGAAGAAAATC ATGACAAAAGTTTACTCACTCACGTTATATATGACATAGCCTGTGTATTA AAATCGCATTTGAAGGTATGTACACTTACTGTATTCTTATTTCCAATGTC ATTCTCAAAGATTATAGCGACGCCGGGTACCTGCTAGTATTAGCGATGTT TTGCTCTTCATCTATGACTAATGTTCACAAGCAAACCACATTAGACGTTC TttgcttttttaaagaaaaagaacacGTTTACGAAGTACAAAGATTTCCA CTTTGGAATACCAGTTTTTCACTCATATGGTCACAGAGGGGATTGTCAGg taataatttttcttctccgCCATTATGATGAATGTATCTTCGTCATCCTG GAGTGGCAATAAACAAAATTGAAGCACGCTTTGATGATGCCCTTATTATC ACCCTCCGTTACACTAGAAAATATCAGTAATACACTCTTCttgagatgca taaatttattgttgtcctcgttttcaaacagatttcattgttataaaatt acatattcacaatgataattgtgttgtttacacctcatgagacattttga atttcaagtacTTTTGTTTTAGAGttaatgtttgccttttgggaatttaa attggtttaaatgtataatttcgtagcaatgaaatctgtttgaaaacgag gacaacaataaatttatgcatctcgagaagagtgtattcccTGAACTTTA TTGTTTATCCAGGTAAAGAATTCCATTCGTCGGCTTGAAACGTTTGGTTT GATGGATGGAGAACTGATGGAGCGCCTGTGGTCTTACCTGAGGTCGTTTT CAAAGATAACCAAAGAAATGACTCCGGCGCATCGAACTGACTTACTCAGT GATGCCTTGATGCACTTTGGCTCAAAGAAAATGGGAAACATAGGCAAGTA CTTTAAGAAACATTCGAGATCCATCTTATAAATTCTTTGACTTGTGACGT TTTATTTAGACTAAAACACAAGCAtactatttttcaatttttttattttt cgtatAAGCTTGCACAATTTTTGCTTTAGGGAAATATCTTGTATTTTTGC GTAACAAGGCGATCGAAACCGTGAATTCCTGTGAGTCGGAGATTAAAGCG ATATGCTCTAAACTGACTGGTAATGGTTCCTTTCATTGTCATTCAGATCG TGTCTACAATCCATTATGGTATAAATAAGTATTTTGATTCCCTACTGTTT ATTTACTAGTTGTAGGAAAACTATAATTATTATACCTTTATCTGCGGGAG AAAACTCGTTCGTCAGTTCTTGAAATTCAATCACATGAAAGTCTCTCCCC TCTAGGTAAATCGTAATGATCCCTATCATAAAAAGGAAATAAAGAGTATT GTATTCagtgaaataaaaaagctactACTTAGCAATTCATCAATCTCATT CCGTTGTAGAAGTTAAAGTGGATGAGAAAGTCATTGAAGCTTGGAAACGA GAGGAAGACAGTGTTGTAAACAAGGACAAAAGGCCACTGCAACCAGGTCA TTACTGCTTCTACCACAGCACTTTTCTTGGACTACTTAATCTATTTACTT ACTTTAATTTATCTTAATTTGCTTGAGCGCTTTACGTTGTAACAGAACTT AAAGAATAATGATTTTAGGCTTTTAGAACcattttttgtattatttttca GATATACAACCGATCTGTATTTTGAGGACATCTAGGCAACTATTGACAAA AGCATTGACGGTACTCTACTGACGGACACGACAAATAATATTCTAGGACA AATCTTCAAACGTTCAGCCAATTTGAAAACAATGACAGTACTCCTTTGAC ATTGacgaataaataaaataataacgTAGCGTTAGAATTTTGTAGCATTT TACTTCTTTATAATTAGAGGTAAGCTTATAATTCAGCTACGTGTTATAGG CATTGGGTTTAAAGTCCCGAAGGGGCTAGACGTGAAACACCTGGATGGGA CATTTCCTAGCTATTTAATCTTTATCTTTATCCAGAACACCTGCGtatgg tttttacacaaatgccgGATTGAAATTAAATCTATCactagatttcgaaa aatatagtacttgaaaacaaagaattaaGTGGTTTCACTTTTCTTGCCTG TAAACAAAagtttctactctagcccttcgggctttaaacttaaTGGTAAT AGCAATGtgcgtttttctttttagatgcTGCCGACTGGAGACAAATTTAT TACGAAAAGCTTAAAACCTTCAACAGGGAATCTTCTTTAGCACTGATGAG TGAAAAAGTATCTGATGTTGCCTTACATCAACGAAAAGCAAAACGGTAAT TTAGGTTTTAAGAGTTACCATTATCCATGCTttttaaaattactttttta ttttgttacacATTTTAAATCAAGAACAAACGTTTAGTAACTATGACGGA CCGATTACCCTTAAAAGTATATTCAAATCTAAGGTATCGAGCCCTTTATT CATGTGAATAGCGTACCGCGgtaaatctaaaaatagacttTATTTTTGCC ATGATCATTACTTTCCATATGTTTGTATGAgtagttccaatcccatcaac gtTTGCGTTAATTTCTTTTgtacgttaattgcatcctatGACAAAAGATA TNCTTTCCATATGTTTGTATGAgtagttccaatcccatcaacgtTTGCGT TAATTTCTTTTgtacgttaattgcatcctatGACAAAAGATATGTAGCAA CGTGCACGTTTTTTAAATTGAGACGAATTGGATTGTGGAATTGCAATTTG TACAAAAATAATGGAAACTGAAAAGTTTAAAACACGCATAACATCTTTCT CCCTTTCCCTATGAAactgtttggtaaatttttgtttggCTGAAAATTAT ATATTTCTTTCATTAGCATCGAATCAAGTTTAAATACATTTGAAAAAGAG CATATGATTGCTAAACGATGGCTTCCAGCTTCTCAAGAATTTAGACTTCA ACATATGAAATATCTAaagcaaaaatcaaaagaaaccatCTCAACTTTGT ATAGCCGATGCTCTGAGAGAATGATGCTTTTAGTACTGAAGAGACGATAT GCAGGTGCATACatacattcttttatttttacaggCAGTGTTGAATTCAA TTTGTACTTGTACTTGgtaattttggtcggggaagaTTGATCAAAATGTC ACTGACTAAAATTTCCCTCCGACTTATTTTCCCCCGAAGGTATACGATAA CGATATCAAccagtttgtttactttttattttaaaatcgtACATAATTTT TCATAGATGGATCGGCCATTGCCACAAGACTATCCAAACAGATCAACAGA GTTTGCAAGGAAATAAAGGATTTGACGGCTTCTTTCAACAACATTAATAC TGAAATATCACTGGATTTTAAGACCGTTAGCTACATAGAAGTATTAGACG TTAAGTCCCCCATCTATAATGATACCActctttttttcaaagtaagTGTC TactttgattttacttttgattttgttttagaaTTGAATTGGAATTTGTT TCGTGGAGTACTATTTCACAAATGAAGAAATCTTTTGTTCAATATTAGAC CAAATTTGCCCTGAAATGGCCAAATTTAAGTACATATTGACCATAATTTT GACGTAAATAAAAGTTTCATTTGATGTGTTTAAAAATCTTATATCTTACT TAGGTAAAATGTTCTTCAGTTCCATACACGGTCATCAAATCTCTTGTTCA ATATCATATGCGGAAACAACGAGCACAAGAAGAAATATCGCTTGTTGAGC GTGAGATGGAAGTCACAGTCTCTTATTGGGAAAAACAACTTTGTTTGCTT ACTGCCTGTTTGGGGCGTCAAACTTTAAAAGGCATCAAATATTTGCTAAC CGAAAGAATACGTGCCATTGAACTTTTCATTTATGAGTtgaaaaagtctt tttcaacTGTCGTAGCTAACCCTTCATTTGACATCAAGAATAACCAAGTT TCCCATGAAATGCCAGATGAGGATGAATATTTCAGTGACTTTTCTGATTC AAGCTATTCAGGAATTGATAGTGAAGAGAATGAGGAAGTTgacctttatt tttgaaattatataagATACAACAATCACGATACGGTTTCGGTTTAAAGA ATCTCGAAGATTTTTACGTGCTTGAAATTTTTAGCTGCACTTGATCCACC TGCTTTtcctcaaaaaaaaatcataaaattcgatttttgagattttcgtC ACGGATCCTAACGAATATTTTAATCAGATTCATTTTCGCGAGTTTGAACT TCATTcttaataagcagatattcaataggtaaaagttggttattgagatt tattaacccgaggtgatgaaTATTCAACGAGTTGAATAtcatcaccgagg gttaataaatccaataaccaacgtaaaacctattgaatatacgTTTTATT CTATAACTAAaggcaaaaacaaaagaaaaacttgaaacattttttggagt cccattttttacaaaataaaaagtgCTCACAAAATCGCATGttcgaaatt tttctttttatcaactttttaattactttaagtgaaattgacaatagaac tattttaaaagttttttctaGCAAGAGTAAACatgcaaaaatccaaaaaa aaaattgaatgaaaaaattgcCATGTGATAATATAGCCATGGAGCCATGT GATATCGTTAATTATCAAACGGcagtttttgcctacaggtatagaATAGT ATTTGTTATTATTTAttaaaccttcaactactcaaaaatGTATAGATAGA TGatatattttattatatataaCTAAACGTTTTTATGGACTTAGGCAAAC TCTTAAATTTTATTGCAAACTTGTTTTCCAAAGTTGAGATTTTCCAATTC AAAGCGTAAATTTCTAGTTTTTCATGGTCCCTTTccttttttactaaaaa atttacattagAATATCTCAACTAACTTTGAAaggtcaattttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039852TCONS_00039852Clytia hemisphaericatranscript
TCONS_00039853TCONS_00039853Clytia hemisphaericatranscript
TCONS_00039854TCONS_00039854Clytia hemisphaericatranscript
TCONS_00039855TCONS_00039855Clytia hemisphaericatranscript
TCONS_00039856TCONS_00039856Clytia hemisphaericatranscript
TCONS_00039857TCONS_00039857Clytia hemisphaericatranscript
TCONS_00039858TCONS_00039858Clytia hemisphaericatranscript
TCONS_00039859TCONS_00039859Clytia hemisphaericatranscript
TCONS_00039860TCONS_00039860Clytia hemisphaericatranscript
TCONS_00039861TCONS_00039861Clytia hemisphaericatranscript
TCONS_00039862TCONS_00039862Clytia hemisphaericatranscript
TCONS_00039863TCONS_00039863Clytia hemisphaericatranscript
TCONS_00039864TCONS_00039864Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039857-proteinTCONS_00039857-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002223supercontigsc0002223:10080..19373 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14 0.09 0.26 0.25 10.24 10.03 9.92 14.79 11.93 11.81 7.63 9.35 7.6 8.32 0.06 0.09 0.31 0.26 0.16 0.16 0.09 0.16 0.07 0.1 1.77 8.09 0.12 0.13 0.11 0.09