TCONS_00039852 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039852
Unique NameTCONS_00039852
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4310

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039852 ID=TCONS_00039852|Name=TCONS_00039852|organism=Clytia hemisphaerica|type=transcript|length=4310bp
tctgacggtaaattattctcctgggaatagtgcagccaaaatgacgtcat
gtttcaaatcaaaacattgatttcAACCCCCTGGCCTGATTAATAGCGGC
AAAATCTTGTTTTTACTAACGTCTTGCCCTGGACGTTGTAGATCAAAACA
ggggttttaatattttcttgcacTGGAAAGAAAGTATGAGGttataatta
ctgctttcaattGTGTGTTTAATGTgtgtcttcgtggaattttttgattg
aatcaaAACATATATTTGAAAACCAATATGATATTgattttggactttgt
tattgATCGTGGACTAGGACTATAATTATATACTGCAAAGACCCCAGTTG
TAAACTCTGACCTGAGAGACAAAATTAAACTTTCAAGGTGAATGtatttg
taaaaatttataTTGAAGTATATTTTCAATATAAGATCTTTATTCTTTCT
TCCTTTTATCATGATGTATTTTTCTATTGCATCTCCCCTTTGAATTCTCC
TCAGGGCTTTAACACCAGCATTCCAGGTATAAAAACATATCCCTTTTTCA
TAAAGTTCATGTTTTATAAAACAGATATTCATTTTGTTTCCTGTACAATG
ATTATGTTTAAGGTTTAAAATAATGACTGGAACACAAAGAACATTCAGAA
AGAAAGTTGTCAAAGTTAAAAGCACAAAAATAAGAAATGGTAGAAAAAGG
ACTACTTATGTCCAACCTTTCATGAGCAGTTCATCTCAATCAAAGTACTT
GAAAAATGAGTCTTTCAGTCCTTGTATATCTGGGGATGAGGATGAGAGCT
CAAAAGAGGATAACTTTGTCACTGATTCAGTAAACAAAACAAACGATGAT
TCAAAAAGGTCAAAGTACCAGACAATGAAGGAAAAGGAGCTTGGGGCATG
GGATACCTTCTCACCTGAAGTGATAAGGAAGTACGCAGAGAAGTTCGATG
AAATGCTACCCACAATATGTGTTATCTGTGAAACAAAATTACTTGAAAAT
TGTGTATGGTGCAAAACATGTGGGCCAAGAACCACATATTGCAGTGGATG
TGCTGTTAAGATCCATAAGCACATGCCTTTTCATTGTCTGTATGAAATAA
ATGATGATGGGTTTCACgaatttcaagtcaattatGAGCTGAAAAGCAAA
CATACAAGCCAATGTCTGTATGCCAAGCCTAGATTATTGACAGTAATTTC
AGAAACAGGACTACATCATCAGTGCTCTATCTATTTTTGTGAATGTGAAA
GTGATTTGGAAACACTACTTCGTCTTGACTTGTGGCCTGTGACTCCAATC
AAACCAAATACGGTGGTGTCTATAGATCTCCTACACCTTTTCATCTCGTT
GCAGTTGGAGGGGAAGAtatcttttcattctttttgtgaTGGTCTAGCGT
GGAAAAAAGGAATGGGAAACACTGTCTTGagaaGATATCTAAATCGTTTG
GAGAAGACTGACACTATCGATCAGTTTAGGAACTTTCGGAGGCAACTTCT
TAACCTCAGAAGCATTTGTGAAGACTTCACTGGACTAGAAGAGTGTGCTG
CTTGTCCCAAAGAAGACGGCAGTGTGTTCTATTGTTTAGATGCAAACTTT
GGTCTAGTACTCAAAGCGTCTGCTTCCAAATCAAAGAAACTTGCGATGCG
ATCTTCCAATTTATTTGTTCCTGATGAAGATATCGATTCATTCATGGTGA
ACTATGATGATGCTTTAAAAACAAAGGATTGCAGTAACTTCCAAGCCGGA
AACAATCTTCGatcgaaaagaaaaacaaagaaattaagTGTTACCGGAAT
TTTCGGAATGTCTTGTAGACACGAATTTCCAAAACTCTTCCTAAATATGA
GGCATGGTGAAAGgctGGGATATGCTGTGTATTTACTTGACCGTTTGTTG
GAAGAAAATCATGACAAAAGTTTACTCACTCACGTTATATATGACATAGC
CTGTGTATTAAAATCGCATTTGAAGaaaaagaacacGTTTACGAAGTACA
AAGATTTCCACTTTGGAATACCAGTTTTTCACTCATATGGTCACAGAGGG
GATTGTCAGGTAAAGAATTCCATTCGTCGGCTTGAAACGTTTGGTTTGAT
GGATGGAGAACTGATGGAGCGCCTGTGGTCTTACCTGAGGTCGTTTTCAA
AGATAACCAAAGAAATGACTCCGGCGCATCGAACTGACTTACTCAGTGAT
GCCTTGATGCACTTTGGCTCAAAGAAAATGGGAAACATAGGGAAATATCT
TGTATTTTTGCGTAACAAGGCGATCGAAACCGTGAATTCCTGTGAGTCGG
AGATTAAAGCGATATGCTCTAAACTGACTGGTAATGGTTCCTTTCATTGT
CATTCAGATCGTGTCTACAATCCATTATGAAGTTAAAGTGGATGAGAAAG
TCATTGAAGCTTGGAAACGAGAGGAAGACAGTGTTGTAAACAAGGACAAA
AGGCCACTGCAACCAGATATACAACCGATCTGTATTTTGAGGACATCTAG
GCAACTATTGACAAAAGCATTGACGatgcTGCCGACTGGAGACAAATTTA
TTACGAAAAGCTTAAAACCTTCAACAGGGAATCTTCTTTAGCACTGATGA
GTGAAAAAGTATCTGATGTTGCCTTACATCAACGAAAAGCAAAACGCATC
GAATCAAGTTTAAATACATTTGAAAAAGAGCATATGATTGCTAAACGATG
GCTTCCAGCTTCTCAAGAATTTAGACTTCAACATATGAAATATCTAaagc
aaaaatcaaaagaaaccatCTCAACTTTGTATAGCCGATGCTCTGAGAGA
ATGATGCTTTTAGTACTGAAGAGACGATATGCAGATGGATCGGCCATTGC
CACAAGACTATCCAAACAGATCAACAGAGTTTGCAAGGAAATAAAGGATT
TGACGGCTTCTTTCAACAACATTAATACTGAAATATCACTGGATTTTAAG
ACCGTTAGCTACATAGAAGTATTAGACGTTAAGTCCCCCATCTATAATGA
TACCActctttttttcaaaGTAAAATGTTCTTCAGTTCCATACACGGTCA
TCAAATCTCTTGTTCAATATCATATGCGGAAACAACGAGCACAAGAAGAA
ATATCGCTTGTTGAGCGTGAGATGGAAGTCACAGTCTCTTATTGGGAAAA
ACAACTTTGTTTGCTTACTGCCTGTTTGGGGCGTCAAACTTTAAAAGGCA
TCAAATATTTGCTAACCGAAAGAATACGTGCCATTGAACTTTTCATTTAT
GAGTtgaaaaagtctttttcaacTGTCGTAGCTAACCCTTCATTTGACAT
CAAGAATAACCAAGTTTCCCATGAAATGCCAGATGAGGATGAATATTTCA
GTGACTTTTCTGATTCAAGCTATTCAGGAATTGATAGTGAAGAGAATGAG
GAAGTTgacctttatttttgaaattatataagATACAACAATCACGATAC
GGTTTCGGTTTAAAGAATCTCGAAGATTTTTACGTGCTTGAAATTTTTAG
CTGCACTTGATCCACCTGCTTTtcctcaaaaaaaaatcataaaattcgat
ttttgagattttcgtCACGGATCCTAACGAATATTTTAATCAGATTCATT
TTCGCGAGTTTGAACTTCATTcttaataagcagatattcaataggtaaaa
gttggttattgagatttattaacccgaggtgatgaaTATTCAACGAGTTG
AATAtcatcaccgagggttaataaatccaataaccaacgtaaaacctatt
gaatatacgTTTTATTCTATAACTAAaggcaaaaacaaaagaaaaacttg
aaacattttttggagtcccattttttacaaaataaaaagtgCTCACAAAA
TCGCATGttcgaaatttttctttttatcaactttttaattactttaagtg
aaattgacaatagaactattttaaaagttttttctaGCAAGAGTAAACat
gcaaaaatccaaaaaaaaaattgaatgaaaaaattgcCATGTGATAATAT
AGCCATGGAGCCATGTGATATCGTTAATTATCAAACGGcagtttttgcct
acaggtatagaATAGTATTTGTTATTATTTAttaaaccttcaactactca
aaaatGTATAGATAGATGatatattttattatatataaCTAAACGTTTTT
ATGGACTTAGGCAAACTCTTAAATTTTATTGCAAACTTGTTTTCCAAAGT
TGAGATTTTCCAATTCAAAGCGTAAATTTCTAGTTTTTCATGGTCCCTTT
ccttttttactaaaaaatttacattagAATATCTCAACTAACTTTGAAag
gtcaattttc
Run BLAST on NCBI

transcript from alignment at sc0002223:10080..19373+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039852 ID=TCONS_00039852|Name=TCONS_00039852|organism=Clytia hemisphaerica|type=transcript|length=9294bp|location=Sequence derived from alignment at sc0002223:10080..19373+ (Clytia hemisphaerica)
tctgacggtaaattattctcctgggaatagtgcagccaaaatgacgtcat
gtttcaaatcaaaacattgatttcAACCCCCTGGCCTGATTAATAGCGGC
AAAATCTTGTTTTTACTAACGTCTTGCCCTGGACGTTGTAGATCAAAACA
ggggttttaatattttcttgcacTGGAAAGAAAGTATGAGGttataatta
ctgctttcaattGTGTGTTTAATGTgtgtcttcgtggaattttttgattg
aatcaaAACATATATTTGAAAACCAATATGATATTgattttggactttgt
tattgATCGTGGACTAGGACTATAATTATATACTGCAAAGACCCCAGTTG
TAAACTCTGACCTGAGAGACAAAATTAAACTTTCAAGGTGAATGtatttg
taaaaatttataTTGAAGTATATTTTCAATATAAGATCTTTATTCTTTCT
TCCTTTTATCATGATGTATTTTTCTATTGCATCTCCCCTTTGAATTCTCC
TCAGGGCTTTAACACCAGCATTCCAGGTATAAAAACATATCCCTTTTTCA
TAAAGTTCATGTTTTATAAAACAGATATTCATTTTGTTTCCTGTACAATG
ATTATGTTTAAGGTTTAAAATAATGACTGGAACACAAAGAACATTCAGAA
AGAAAGTTGTCAAAGTTAAAAGCACAAAAATAAGAAATGGTAGAAAAAGG
ACTACTTATGTCCAACCTTTCATGAGCAGTTCATCTCAATCAAAGTACTT
GAAAAATGAGTCTTTCAGTCCTTGTATATCTGGGGATGAGGATGAGAGCT
CAAAAGAGGATAACTTTGTCACTGATTCAGTAAACAAAACAAACGATGAT
TCAAAAAGGTCAAAGTACCAGACAATGAAGGAAAAGGAGCTTGGGGCATG
GGATACCTTCTCACCTGAAGTGATAAGGAAGTACGCAGAGAAGTTCGATG
AAATGCTACCCACAATATGTGTTATCTGTGAAACAAAATTACTTGAAAAT
TGTGTATGGTGCAAAACATGTGGGCCAAGAACCACATATTGCAGTGGATG
TGCTGTTAAGATCCATAAGCACATGCCTTTTCATTGTCTGTATGAAATAA
ATGTAAGTATTCTAATCCTAGAGTAACTGGTAATAGGGTATACTCTTGGG
TCTCAAATGAAATAAACATACAGGtacatttaaaataaattaagaTTATT
TTTGAGGTCTTTATGATAACCCAacttgattctttttttgtgaAGCTGGA
CCCTTGCCTGATTACATATTGAGATAATTTTTTGCTCAGGGCTGAAGTGG
TCAAAGGGATTTCATATTTTGATACCAACGGATGGATTTCTGTTTCAGGG
CTGGAGCCTTAGCAGCTTAGGTTGCTTATGAAAGTAATGTATAGAAAAAG
CGTTCTCTTCTAGAAAGCATGGAATGTACAGGAAAGTAGTTGCAGATTTC
TTTCCTGTCATTTGCGCTAGATTCAGGGTTTAGTGGTCTTTTGAAGAAGT
GACAATAATCAGACTGGccatcaaaaaacttttgatttatATAATTTCTT
CCTAATCTATTTGAAGGATGATGGGTTTCACgaatttcaagtcaattatG
AGCTGAAAAGCAAACATACAAGCCAATGTCTGTATGCCAAGCCTAGATTA
TTGACAGTAATTTCAGAAACAGGTATTAAAAATCCTTTACATGTCATTAC
TTTAAAGGATCACATGGTGTCATGCAAGTTTTTTGGGTCCCCCATCCGGT
GTTGAAAACCCCCATCTGGCTTTCCTTCCCCATTACTGTTTGATTTCTGG
TCTCTCGATCTGAAAATTACTTATATAAAGTTGTTGGTTCACATCAAAAT
GAATTATAAATGATAAATTCATGCAAAAACATTATacaaaaaaagatatt
catgTAATCAATAAGTAAGATTGATACCTTTCTTTGATGTTTaccttgga
aaaaaaattcatccccTCCCAGACCAACAATGTGATATTAATTTATTCTC
TGATAAAAACAGGCTACCTGATAATCTAATTAAATTGTTCATGCAAATAt
ccttttgaaagttttaaaactttGGGTCTATGGTTCTTTTTTTAAACGTT
ATGATTTTTCATAGTTACAGAATTTCAGCATTATGTTCTATAAGACATAG
ATACAAATAGGGGGGAAAGATAAAATctatatatttgaataatttttttt
caaaattacgtCATCTTTTCTAGGACTACATCATCAGTGCTCTATCTATT
TTTGTGAATGTGAAAGTGATTTGGAAACACTACTTCGTCTTGACTTGTGG
CCTGTGACTCCAATCAAACCAAATACGGTGGTGTCTATAGATCTCCTACA
CCTTTTCATCTCGTTGCAGTTGGAGGGGAAGAtatcttttcattcttttt
gtgaTGGTCTAGCGTGGAAAAAAGGAATGGGAAACACTGTCTTGGTAAAT
ATTTTCATGATAAACTAGTATTAGTtgcccttcgtggaaacaattttTTA
GGTGTCTAAAGGATACTGAATATTCGGAGCATGCCACTTAAAAtatatgt
tattattattactttgcttgatttattttttaataaatagGCTCTTACAC
TCGTTGAGATATTTTCAATTATTCTTGTTTTCTGGCGCttgagtttttat
ttttatttttagagaaGATATCTAAATCGTTTGGAGAAGACTGACACTAT
CGATCAGTTTAGGAACTTTCGGAGGCAACTTCTTAACCTCAGAAGCATTT
GTGAAGACTTCACTGGACTAGAAGAGTGTGCTGCTTGTCCCAAAGTAAGA
ATTACTTTTACACATGCTTTGATCAGAGTGGAACCACTAAGGTGCATAAC
ATTGTTGACACTAAGGAACACATTTTAATAAGCAAACCTATTATTTTCTG
GCTCATTGCTAAGGTCGCTAAGATTTTTGTCAAACTCAAGGTTGCAGTTG
TTGCTCAATAGGCCACTAAGGTTTTCTCTTGTTCATGTTGTGAACATCTG
TTGTTGAAGAAGAAGTTGCTTTGCTTATCAAAGGCTCAGAGTACAGCAAA
TTTATGAGCAAGGCCAACCTTAGCAACTAGCTTGCTTTAAGTAAAATAAT
GTGTATTAAAGAAGGAATATCAACTTTCGTTTAGGAAGACGGCAGTGTGT
TCTATTGTTTAGATGCAAACTTTGGTCTAGTACTCAAAGCGTCTGCTTCC
AAATCAAAGAAACTTGCGATGCGATCTTCCAATTTATTTGTTCCTGATGA
AGATATCGATTCATTCATGGTGAACTATGATGATGCTTTAAAAACAAAGG
TGAgatttttattctattttaaaaAGCAGCGATGCCTAAACATATTTTAA
TTTATTAAATTCTCTAGGAGTgacctttaaaatttttcaaaatcaaatca
aagcaATCTTAATCTAAGAAGCTGTgaaattaatattttgaccTATAAAA
ATTGAGATGCTATGAGTCCTCATGAGTCCTTATATGTTCTGATATACTGT
GTTACAAAATATTATAATTGAAAGTCATTGTAGTTCTTTAGGAACTTCTT
ACTAGGATTGCAGTAACTTCCAAGCCGGAAACAATCTTCGatcgaaaaga
aaaacaaagaaattaagTGTTACCGGAATTTTCGGAATGTCTTGTAGACA
CGAATTTCCAAAACTCTTCCTAAATATGAGGCATGGTGAAAGGTATTAAA
ATGAGTTGAATTTTATCCCCAACAATTAAATTGAATCTCAAGGAGAATAG
AATCAAATACAATTTTaatgaagtttgaaaaaagaatttctttccAAGAT
CTTCAGATCCATTTTAAGCGCTTGAATCTTGGCAACTTGGTTacttataa
aaataacgtgTAGTATAATTCCTTAGAAATGAATATTTGTGGGAAGATAT
TTTCCCGAAAGCAATCTTTGTGGAACTGCTCTGAAATCATAAATCGATCC
TAAATCTGGTCTTTCTTGGACAAAGTTCATctgcaaaattttggcaaaaa
taaatTAACGAAATTTAAGCCAGGGTGAGCTCATTTTCCATATGCTACTC
TTTGGTGCTTAATTTTAGGGGACAATAGAATAAGCGGGACGGGTGGGTAC
TCGagaataaaatcaacaaaatcggGGAGGGGTCATAATGTGTCTGATTG
GGGCCTGATTGTGCTGAAGATTCCTTGGAATCTTGGAAAATGAAGCTTTT
AACCCTTTTTTGGTACTTCGTAGgataaaagtcataaaatgggAGGTCAT
TATTAATGATATCGGGGTTGAAAAATTATTGTAcatcatataaaaatttt
caggctGGGATATGCTGTGTATTTACTTGACCGTTTGTTGGAAGAAAATC
ATGACAAAAGTTTACTCACTCACGTTATATATGACATAGCCTGTGTATTA
AAATCGCATTTGAAGGTATGTACACTTACTGTATTCTTATTTCCAATGTC
ATTCTCAAAGATTATAGCGACGCCGGGTACCTGCTAGTATTAGCGATGTT
TTGCTCTTCATCTATGACTAATGTTCACAAGCAAACCACATTAGACGTTC
TttgcttttttaaagaaaaagaacacGTTTACGAAGTACAAAGATTTCCA
CTTTGGAATACCAGTTTTTCACTCATATGGTCACAGAGGGGATTGTCAGg
taataatttttcttctccgCCATTATGATGAATGTATCTTCGTCATCCTG
GAGTGGCAATAAACAAAATTGAAGCACGCTTTGATGATGCCCTTATTATC
ACCCTCCGTTACACTAGAAAATATCAGTAATACACTCTTCttgagatgca
taaatttattgttgtcctcgttttcaaacagatttcattgttataaaatt
acatattcacaatgataattgtgttgtttacacctcatgagacattttga
atttcaagtacTTTTGTTTTAGAGttaatgtttgccttttgggaatttaa
attggtttaaatgtataatttcgtagcaatgaaatctgtttgaaaacgag
gacaacaataaatttatgcatctcgagaagagtgtattcccTGAACTTTA
TTGTTTATCCAGGTAAAGAATTCCATTCGTCGGCTTGAAACGTTTGGTTT
GATGGATGGAGAACTGATGGAGCGCCTGTGGTCTTACCTGAGGTCGTTTT
CAAAGATAACCAAAGAAATGACTCCGGCGCATCGAACTGACTTACTCAGT
GATGCCTTGATGCACTTTGGCTCAAAGAAAATGGGAAACATAGGCAAGTA
CTTTAAGAAACATTCGAGATCCATCTTATAAATTCTTTGACTTGTGACGT
TTTATTTAGACTAAAACACAAGCAtactatttttcaatttttttattttt
cgtatAAGCTTGCACAATTTTTGCTTTAGGGAAATATCTTGTATTTTTGC
GTAACAAGGCGATCGAAACCGTGAATTCCTGTGAGTCGGAGATTAAAGCG
ATATGCTCTAAACTGACTGGTAATGGTTCCTTTCATTGTCATTCAGATCG
TGTCTACAATCCATTATGGTATAAATAAGTATTTTGATTCCCTACTGTTT
ATTTACTAGTTGTAGGAAAACTATAATTATTATACCTTTATCTGCGGGAG
AAAACTCGTTCGTCAGTTCTTGAAATTCAATCACATGAAAGTCTCTCCCC
TCTAGGTAAATCGTAATGATCCCTATCATAAAAAGGAAATAAAGAGTATT
GTATTCagtgaaataaaaaagctactACTTAGCAATTCATCAATCTCATT
CCGTTGTAGAAGTTAAAGTGGATGAGAAAGTCATTGAAGCTTGGAAACGA
GAGGAAGACAGTGTTGTAAACAAGGACAAAAGGCCACTGCAACCAGGTCA
TTACTGCTTCTACCACAGCACTTTTCTTGGACTACTTAATCTATTTACTT
ACTTTAATTTATCTTAATTTGCTTGAGCGCTTTACGTTGTAACAGAACTT
AAAGAATAATGATTTTAGGCTTTTAGAACcattttttgtattatttttca
GATATACAACCGATCTGTATTTTGAGGACATCTAGGCAACTATTGACAAA
AGCATTGACGGTACTCTACTGACGGACACGACAAATAATATTCTAGGACA
AATCTTCAAACGTTCAGCCAATTTGAAAACAATGACAGTACTCCTTTGAC
ATTGacgaataaataaaataataacgTAGCGTTAGAATTTTGTAGCATTT
TACTTCTTTATAATTAGAGGTAAGCTTATAATTCAGCTACGTGTTATAGG
CATTGGGTTTAAAGTCCCGAAGGGGCTAGACGTGAAACACCTGGATGGGA
CATTTCCTAGCTATTTAATCTTTATCTTTATCCAGAACACCTGCGtatgg
tttttacacaaatgccgGATTGAAATTAAATCTATCactagatttcgaaa
aatatagtacttgaaaacaaagaattaaGTGGTTTCACTTTTCTTGCCTG
TAAACAAAagtttctactctagcccttcgggctttaaacttaaTGGTAAT
AGCAATGtgcgtttttctttttagatgcTGCCGACTGGAGACAAATTTAT
TACGAAAAGCTTAAAACCTTCAACAGGGAATCTTCTTTAGCACTGATGAG
TGAAAAAGTATCTGATGTTGCCTTACATCAACGAAAAGCAAAACGGTAAT
TTAGGTTTTAAGAGTTACCATTATCCATGCTttttaaaattactttttta
ttttgttacacATTTTAAATCAAGAACAAACGTTTAGTAACTATGACGGA
CCGATTACCCTTAAAAGTATATTCAAATCTAAGGTATCGAGCCCTTTATT
CATGTGAATAGCGTACCGCGgtaaatctaaaaatagacttTATTTTTGCC
ATGATCATTACTTTCCATATGTTTGTATGAgtagttccaatcccatcaac
gtTTGCGTTAATTTCTTTTgtacgttaattgcatcctatGACAAAAGATA
TNCTTTCCATATGTTTGTATGAgtagttccaatcccatcaacgtTTGCGT
TAATTTCTTTTgtacgttaattgcatcctatGACAAAAGATATGTAGCAA
CGTGCACGTTTTTTAAATTGAGACGAATTGGATTGTGGAATTGCAATTTG
TACAAAAATAATGGAAACTGAAAAGTTTAAAACACGCATAACATCTTTCT
CCCTTTCCCTATGAAactgtttggtaaatttttgtttggCTGAAAATTAT
ATATTTCTTTCATTAGCATCGAATCAAGTTTAAATACATTTGAAAAAGAG
CATATGATTGCTAAACGATGGCTTCCAGCTTCTCAAGAATTTAGACTTCA
ACATATGAAATATCTAaagcaaaaatcaaaagaaaccatCTCAACTTTGT
ATAGCCGATGCTCTGAGAGAATGATGCTTTTAGTACTGAAGAGACGATAT
GCAGGTGCATACatacattcttttatttttacaggCAGTGTTGAATTCAA
TTTGTACTTGTACTTGgtaattttggtcggggaagaTTGATCAAAATGTC
ACTGACTAAAATTTCCCTCCGACTTATTTTCCCCCGAAGGTATACGATAA
CGATATCAAccagtttgtttactttttattttaaaatcgtACATAATTTT
TCATAGATGGATCGGCCATTGCCACAAGACTATCCAAACAGATCAACAGA
GTTTGCAAGGAAATAAAGGATTTGACGGCTTCTTTCAACAACATTAATAC
TGAAATATCACTGGATTTTAAGACCGTTAGCTACATAGAAGTATTAGACG
TTAAGTCCCCCATCTATAATGATACCActctttttttcaaagtaagTGTC
TactttgattttacttttgattttgttttagaaTTGAATTGGAATTTGTT
TCGTGGAGTACTATTTCACAAATGAAGAAATCTTTTGTTCAATATTAGAC
CAAATTTGCCCTGAAATGGCCAAATTTAAGTACATATTGACCATAATTTT
GACGTAAATAAAAGTTTCATTTGATGTGTTTAAAAATCTTATATCTTACT
TAGGTAAAATGTTCTTCAGTTCCATACACGGTCATCAAATCTCTTGTTCA
ATATCATATGCGGAAACAACGAGCACAAGAAGAAATATCGCTTGTTGAGC
GTGAGATGGAAGTCACAGTCTCTTATTGGGAAAAACAACTTTGTTTGCTT
ACTGCCTGTTTGGGGCGTCAAACTTTAAAAGGCATCAAATATTTGCTAAC
CGAAAGAATACGTGCCATTGAACTTTTCATTTATGAGTtgaaaaagtctt
tttcaacTGTCGTAGCTAACCCTTCATTTGACATCAAGAATAACCAAGTT
TCCCATGAAATGCCAGATGAGGATGAATATTTCAGTGACTTTTCTGATTC
AAGCTATTCAGGAATTGATAGTGAAGAGAATGAGGAAGTTgacctttatt
tttgaaattatataagATACAACAATCACGATACGGTTTCGGTTTAAAGA
ATCTCGAAGATTTTTACGTGCTTGAAATTTTTAGCTGCACTTGATCCACC
TGCTTTtcctcaaaaaaaaatcataaaattcgatttttgagattttcgtC
ACGGATCCTAACGAATATTTTAATCAGATTCATTTTCGCGAGTTTGAACT
TCATTcttaataagcagatattcaataggtaaaagttggttattgagatt
tattaacccgaggtgatgaaTATTCAACGAGTTGAATAtcatcaccgagg
gttaataaatccaataaccaacgtaaaacctattgaatatacgTTTTATT
CTATAACTAAaggcaaaaacaaaagaaaaacttgaaacattttttggagt
cccattttttacaaaataaaaagtgCTCACAAAATCGCATGttcgaaatt
tttctttttatcaactttttaattactttaagtgaaattgacaatagaac
tattttaaaagttttttctaGCAAGAGTAAACatgcaaaaatccaaaaaa
aaaattgaatgaaaaaattgcCATGTGATAATATAGCCATGGAGCCATGT
GATATCGTTAATTATCAAACGGcagtttttgcctacaggtatagaATAGT
ATTTGTTATTATTTAttaaaccttcaactactcaaaaatGTATAGATAGA
TGatatattttattatatataaCTAAACGTTTTTATGGACTTAGGCAAAC
TCTTAAATTTTATTGCAAACTTGTTTTCCAAAGTTGAGATTTTCCAATTC
AAAGCGTAAATTTCTAGTTTTTCATGGTCCCTTTccttttttactaaaaa
atttacattagAATATCTCAACTAACTTTGAAaggtcaattttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024125XLOC_024125Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039852-exon-sc0002223-1491911889:10080..11181TCONS_00039852-exon-sc0002223-1491911889:10080..11181Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:10080..11181TCONS_00039852-exon-sc0002223-1510915933:10080..11181Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:10080..11181TCONS_00039852-exon-sc0002223-1575043694:10080..11181Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:11646..11751TCONS_00039852-exon-sc0002223-1491911889:11646..11751Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:11646..11751TCONS_00039852-exon-sc0002223-1510915933:11646..11751Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:11646..11751TCONS_00039852-exon-sc0002223-1575043694:11646..11751Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:12303..12523TCONS_00039852-exon-sc0002223-1491911889:12303..12523Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:12303..12523TCONS_00039852-exon-sc0002223-1510915933:12303..12523Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:12303..12523TCONS_00039852-exon-sc0002223-1575043694:12303..12523Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:12742..12873TCONS_00039852-exon-sc0002223-1491911889:12742..12873Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:12742..12873TCONS_00039852-exon-sc0002223-1510915933:12742..12873Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:12742..12873TCONS_00039852-exon-sc0002223-1575043694:12742..12873Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:13214..13378TCONS_00039852-exon-sc0002223-1491911889:13214..13378Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:13214..13378TCONS_00039852-exon-sc0002223-1510915933:13214..13378Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:13214..13378TCONS_00039852-exon-sc0002223-1575043694:13214..13378Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:13635..13771TCONS_00039852-exon-sc0002223-1491911889:13635..13771Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:13635..13771TCONS_00039852-exon-sc0002223-1510915933:13635..13771Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:13635..13771TCONS_00039852-exon-sc0002223-1575043694:13635..13771Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:14383..14494TCONS_00039852-exon-sc0002223-1491911889:14383..14494Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:14383..14494TCONS_00039852-exon-sc0002223-1510915933:14383..14494Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:14383..14494TCONS_00039852-exon-sc0002223-1575043694:14383..14494Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:14645..14728TCONS_00039852-exon-sc0002223-1491911889:14645..14728Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:14645..14728TCONS_00039852-exon-sc0002223-1510915933:14645..14728Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:14645..14728TCONS_00039852-exon-sc0002223-1575043694:14645..14728Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:15142..15322TCONS_00039852-exon-sc0002223-1491911889:15142..15322Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:15142..15322TCONS_00039852-exon-sc0002223-1510915933:15142..15322Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:15142..15322TCONS_00039852-exon-sc0002223-1575043694:15142..15322Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:15459..15597TCONS_00039852-exon-sc0002223-1491911889:15459..15597Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:15459..15597TCONS_00039852-exon-sc0002223-1510915933:15459..15597Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:15459..15597TCONS_00039852-exon-sc0002223-1575043694:15459..15597Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:15839..15925TCONS_00039852-exon-sc0002223-1491911889:15839..15925Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:15839..15925TCONS_00039852-exon-sc0002223-1510915933:15839..15925Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:15839..15925TCONS_00039852-exon-sc0002223-1575043694:15839..15925Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:16081..16139TCONS_00039852-exon-sc0002223-1491911889:16081..16139Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:16081..16139TCONS_00039852-exon-sc0002223-1510915933:16081..16139Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:16081..16139TCONS_00039852-exon-sc0002223-1575043694:16081..16139Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:16604..16724TCONS_00039852-exon-sc0002223-1491911889:16604..16724Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:16604..16724TCONS_00039852-exon-sc0002223-1510915933:16604..16724Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:16604..16724TCONS_00039852-exon-sc0002223-1575043694:16604..16724Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:17296..17483TCONS_00039852-exon-sc0002223-1491911889:17296..17483Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:17296..17483TCONS_00039852-exon-sc0002223-1510915933:17296..17483Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:17296..17483TCONS_00039852-exon-sc0002223-1575043694:17296..17483Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:17686..17870TCONS_00039852-exon-sc0002223-1491911889:17686..17870Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:17686..17870TCONS_00039852-exon-sc0002223-1510915933:17686..17870Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:17686..17870TCONS_00039852-exon-sc0002223-1575043694:17686..17870Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1491911889:18083..19373TCONS_00039852-exon-sc0002223-1491911889:18083..19373Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1510915933:18083..19373TCONS_00039852-exon-sc0002223-1510915933:18083..19373Clytia hemisphaericaexon
TCONS_00039852-exon-sc0002223-1575043694:18083..19373TCONS_00039852-exon-sc0002223-1575043694:18083..19373Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002223supercontigsc0002223:10080..19373 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.920912	0.378382	0.288892	1.20069	0.0659274	1.52919e-05	1.92091e-10	0	0.353362	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039852 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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