TCONS_00039854 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039854
Unique NameTCONS_00039854
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3839

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039854 ID=TCONS_00039854|Name=TCONS_00039854|organism=Clytia hemisphaerica|type=transcript|length=3839bp
ctgacggtaaattattctcctgggaatagtgcagccaaaatgacgtcatg
tttcaaatcaaaacattgatttcAACCCCCTGGCCTGATTAATAGCGGCA
AAATCTTGTTTTTACTAACGTCTTGCCCTGGACGTTGTAGATCAAAACAg
gggttttaatattttcttgcacTGGAAAGAAAGTATGAGGttataattac
tgctttcaattGTGTGTTTAATGTgtgtcttcgtggaattttttgattga
atcaaAACATATATTTGAAAACCAATATGATATTgattttggactttgtt
attgATCGTGGACTAGGACTATAATTATATACTGCAAAGACCCCAGTTGT
AAACTCTGACCTGAGAGACAAAATTAAACTTTCAAGGTTTAAAATAATGA
CTGGAACACAAAGAACATTCAGAAAGAAAGTTGTCAAAGTTAAAAGCACA
AAAATAAGAAATGGTAGAAAAAGGACTACTTATGTCCAACCTTTCATGAG
CAGTTCATCTCAATCAAAGTACTTGAAAAATGAGTCTTTCAGTCCTTGTA
TATCTGGGGATGAGGATGAGAGCTCAAAAGAGGATAACTTTGTCACTGAT
TCAGTAAACAAAACAAACGATGATTCAAAAAGGTCAAAGTACCAGACAAT
GAAGGAAAAGGAGCTTGGGGCATGGGATACCTTCTCACCTGAAGTGATAA
GGAAGTACGCAGAGAAGTTCGATGAAATGCTACCCACAATATGTGTTATC
TGTGAAACAAAATTACTTGAAAATTGTGTATGGTGCAAAACATGTGGGCC
AAGAACCACATATTGCAGTGGATGTGCTGTTAAGATCCATAAGCACATGC
CTTTTCATTGTCTGTATGAAATAAATGATGATGGGTTTCACgaatttcaa
gtcaattatGAGCTGAAAAGCAAACATACAAGCCAATGTCTGTATGCCAA
GCCTAGATTATTGACAGTAATTTCAGAAACAGGACTACATCATCAGTGCT
CTATCTATTTTTGTGAATGTGAAAGTGATTTGGAAACACTACTTCGTCTT
GACTTGTGGCCTGTGACTCCAATCAAACCAAATACGGTGGTGTCTATAGA
TCTCCTACACCTTTTCATCTCGTTGCAGTTGGAGGGGAAGAtatcttttc
attctttttgtgaTGGTCTAGCGTGGAAAAAAGGAATGGGAAACACTGTC
TTGagaaGATATCTAAATCGTTTGGAGAAGACTGACACTATCGATCAGTT
TAGGAACTTTCGGAGGCAACTTCTTAACCTCAGAAGCATTTGTGAAGACT
TCACTGGACTAGAAGAGTGTGCTGCTTGTCCCAAAGAAGACGGCAGTGTG
TTCTATTGTTTAGATGCAAACTTTGGTCTAGTACTCAAAGCGTCTGCTTC
CAAATCAAAGAAACTTGCGATGCGATCTTCCAATTTATTTGTTCCTGATG
AAGATATCGATTCATTCATGGTGAACTATGATGATGCTTTAAAAACAAAG
gctGGGATATGCTGTGTATTTACTTGACCGTTTGTTGGAAGAAAATCATG
ACAAAAGTTTACTCACTCACGTTATATATGACATAGCCTGTGTATTAAAA
TCGCATTTGAAGaaaaagaacacGTTTACGAAGTACAAAGATTTCCACTT
TGGAATACCAGTTTTTCACTCATATGGTCACAGAGGGGATTGTCAGGTAA
AGAATTCCATTCGTCGGCTTGAAACGTTTGGTTTGATGGATGGAGAACTG
ATGGAGCGCCTGTGGTCTTACCTGAGGTCGTTTTCAAAGATAACCAAAGA
AATGACTCCGGCGCATCGAACTGACTTACTCAGTGATGCCTTGATGCACT
TTGGCTCAAAGAAAATGGGAAACATAGGGAAATATCTTGTATTTTTGCGT
AACAAGGCGATCGAAACCGTGAATTCCTGTGAGTCGGAGATTAAAGCGAT
ATGCTCTAAACTGACTGAAGTTAAAGTGGATGAGAAAGTCATTGAAGCTT
GGAAACGAGAGGAAGACAGTGTTGTAAACAAGGACAAAAGGCCACTGCAA
CCAGatgcTGCCGACTGGAGACAAATTTATTACGAAAAGCTTAAAACCTT
CAACAGGGAATCTTCTTTAGCACTGATGAGTGAAAAAGTATCTGATGTTG
CCTTACATCAACGAAAAGCAAAACGCATCGAATCAAGTTTAAATACATTT
GAAAAAGAGCATATGATTGCTAAACGATGGCTTCCAGCTTCTCAAGAATT
TAGACTTCAACATATGAAATATCTAaagcaaaaatcaaaagaaaccatCT
CAACTTTGTATAGCCGATGCTCTGAGAGAATGATGCTTTTAGTACTGAAG
AGACGATATGCAGATGGATCGGCCATTGCCACAAGACTATCCAAACAGAT
CAACAGAGTTTGCAAGGAAATAAAGGATTTGACGGCTTCTTTCAACAACA
TTAATACTGAAATATCACTGGATTTTAAGACCGTTAGCTACATAGAAGTA
TTAGACGTTAAGTCCCCCATCTATAATGATACCActctttttttcaaaGT
AAAATGTTCTTCAGTTCCATACACGGTCATCAAATCTCTTGTTCAATATC
ATATGCGGAAACAACGAGCACAAGAAGAAATATCGCTTGTTGAGCGTGAG
ATGGAAGTCACAGTCTCTTATTGGGAAAAACAACTTTGTTTGCTTACTGC
CTGTTTGGGGCGTCAAACTTTAAAAGGCATCAAATATTTGCTAACCGAAA
GAATACGTGCCATTGAACTTTTCATTTATGAGTtgaaaaagtctttttca
acTGTCGTAGCTAACCCTTCATTTGACATCAAGAATAACCAAGTTTCCCA
TGAAATGCCAGATGAGGATGAATATTTCAGTGACTTTTCTGATTCAAGCT
ATTCAGGAATTGATAGTGAAGAGAATGAGGAAGTTgacctttatttttga
aattatataagATACAACAATCACGATACGGTTTCGGTTTAAAGAATCTC
GAAGATTTTTACGTGCTTGAAATTTTTAGCTGCACTTGATCCACCTGCTT
TtcctcaaaaaaaaatcataaaattcgatttttgagattttcgtCACGGA
TCCTAACGAATATTTTAATCAGATTCATTTTCGCGAGTTTGAACTTCATT
cttaataagcagatattcaataggtaaaagttggttattgagatttatta
acccgaggtgatgaaTATTCAACGAGTTGAATAtcatcaccgagggttaa
taaatccaataaccaacgtaaaacctattgaatatacgTTTTATTCTATA
ACTAAaggcaaaaacaaaagaaaaacttgaaacattttttggagtcccat
tttttacaaaataaaaagtgCTCACAAAATCGCATGttcgaaatttttct
ttttatcaactttttaattactttaagtgaaattgacaatagaactattt
taaaagttttttctaGCAAGAGTAAACatgcaaaaatccaaaaaaaaaat
tgaatgaaaaaattgcCATGTGATAATATAGCCATGGAGCCATGTGATAT
CGTTAATTATCAAACGGcagtttttgcctacaggtatagaATAGTATTTG
TTATTATTTAttaaaccttcaactactcaaaaatGTATAGATAGATGata
tattttattatatataaCTAAACGTTTTTATGGACTTAGGCAAACTCTTA
AATTTTATTGCAAACTTGTTTTCCAAAGTTGAGATTTTCCAATTCAAAGC
GTAAATTTCTAGTTTTTCATGGTCCCTTTccttttttactaaaaaattta
cattagAATATCTCAACTAACTTTGAAaggtcaattttc
Run BLAST on NCBI

transcript from alignment at sc0002223:10081..19373+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039854 ID=TCONS_00039854|Name=TCONS_00039854|organism=Clytia hemisphaerica|type=transcript|length=9293bp|location=Sequence derived from alignment at sc0002223:10081..19373+ (Clytia hemisphaerica)
ctgacggtaaattattctcctgggaatagtgcagccaaaatgacgtcatg
tttcaaatcaaaacattgatttcAACCCCCTGGCCTGATTAATAGCGGCA
AAATCTTGTTTTTACTAACGTCTTGCCCTGGACGTTGTAGATCAAAACAg
gggttttaatattttcttgcacTGGAAAGAAAGTATGAGGttataattac
tgctttcaattGTGTGTTTAATGTgtgtcttcgtggaattttttgattga
atcaaAACATATATTTGAAAACCAATATGATATTgattttggactttgtt
attgATCGTGGACTAGGACTATAATTATATACTGCAAAGACCCCAGTTGT
AAACTCTGACCTGAGAGACAAAATTAAACTTTCAAGGTGAATGtatttgt
aaaaatttataTTGAAGTATATTTTCAATATAAGATCTTTATTCTTTCTT
CCTTTTATCATGATGTATTTTTCTATTGCATCTCCCCTTTGAATTCTCCT
CAGGGCTTTAACACCAGCATTCCAGGTATAAAAACATATCCCTTTTTCAT
AAAGTTCATGTTTTATAAAACAGATATTCATTTTGTTTCCTGTACAATGA
TTATGTTTAAGGTTTAAAATAATGACTGGAACACAAAGAACATTCAGAAA
GAAAGTTGTCAAAGTTAAAAGCACAAAAATAAGAAATGGTAGAAAAAGGA
CTACTTATGTCCAACCTTTCATGAGCAGTTCATCTCAATCAAAGTACTTG
AAAAATGAGTCTTTCAGTCCTTGTATATCTGGGGATGAGGATGAGAGCTC
AAAAGAGGATAACTTTGTCACTGATTCAGTAAACAAAACAAACGATGATT
CAAAAAGGTCAAAGTACCAGACAATGAAGGAAAAGGAGCTTGGGGCATGG
GATACCTTCTCACCTGAAGTGATAAGGAAGTACGCAGAGAAGTTCGATGA
AATGCTACCCACAATATGTGTTATCTGTGAAACAAAATTACTTGAAAATT
GTGTATGGTGCAAAACATGTGGGCCAAGAACCACATATTGCAGTGGATGT
GCTGTTAAGATCCATAAGCACATGCCTTTTCATTGTCTGTATGAAATAAA
TGTAAGTATTCTAATCCTAGAGTAACTGGTAATAGGGTATACTCTTGGGT
CTCAAATGAAATAAACATACAGGtacatttaaaataaattaagaTTATTT
TTGAGGTCTTTATGATAACCCAacttgattctttttttgtgaAGCTGGAC
CCTTGCCTGATTACATATTGAGATAATTTTTTGCTCAGGGCTGAAGTGGT
CAAAGGGATTTCATATTTTGATACCAACGGATGGATTTCTGTTTCAGGGC
TGGAGCCTTAGCAGCTTAGGTTGCTTATGAAAGTAATGTATAGAAAAAGC
GTTCTCTTCTAGAAAGCATGGAATGTACAGGAAAGTAGTTGCAGATTTCT
TTCCTGTCATTTGCGCTAGATTCAGGGTTTAGTGGTCTTTTGAAGAAGTG
ACAATAATCAGACTGGccatcaaaaaacttttgatttatATAATTTCTTC
CTAATCTATTTGAAGGATGATGGGTTTCACgaatttcaagtcaattatGA
GCTGAAAAGCAAACATACAAGCCAATGTCTGTATGCCAAGCCTAGATTAT
TGACAGTAATTTCAGAAACAGGTATTAAAAATCCTTTACATGTCATTACT
TTAAAGGATCACATGGTGTCATGCAAGTTTTTTGGGTCCCCCATCCGGTG
TTGAAAACCCCCATCTGGCTTTCCTTCCCCATTACTGTTTGATTTCTGGT
CTCTCGATCTGAAAATTACTTATATAAAGTTGTTGGTTCACATCAAAATG
AATTATAAATGATAAATTCATGCAAAAACATTATacaaaaaaagatattc
atgTAATCAATAAGTAAGATTGATACCTTTCTTTGATGTTTaccttggaa
aaaaaattcatccccTCCCAGACCAACAATGTGATATTAATTTATTCTCT
GATAAAAACAGGCTACCTGATAATCTAATTAAATTGTTCATGCAAATAtc
cttttgaaagttttaaaactttGGGTCTATGGTTCTTTTTTTAAACGTTA
TGATTTTTCATAGTTACAGAATTTCAGCATTATGTTCTATAAGACATAGA
TACAAATAGGGGGGAAAGATAAAATctatatatttgaataattttttttc
aaaattacgtCATCTTTTCTAGGACTACATCATCAGTGCTCTATCTATTT
TTGTGAATGTGAAAGTGATTTGGAAACACTACTTCGTCTTGACTTGTGGC
CTGTGACTCCAATCAAACCAAATACGGTGGTGTCTATAGATCTCCTACAC
CTTTTCATCTCGTTGCAGTTGGAGGGGAAGAtatcttttcattctttttg
tgaTGGTCTAGCGTGGAAAAAAGGAATGGGAAACACTGTCTTGGTAAATA
TTTTCATGATAAACTAGTATTAGTtgcccttcgtggaaacaattttTTAG
GTGTCTAAAGGATACTGAATATTCGGAGCATGCCACTTAAAAtatatgtt
attattattactttgcttgatttattttttaataaatagGCTCTTACACT
CGTTGAGATATTTTCAATTATTCTTGTTTTCTGGCGCttgagtttttatt
tttatttttagagaaGATATCTAAATCGTTTGGAGAAGACTGACACTATC
GATCAGTTTAGGAACTTTCGGAGGCAACTTCTTAACCTCAGAAGCATTTG
TGAAGACTTCACTGGACTAGAAGAGTGTGCTGCTTGTCCCAAAGTAAGAA
TTACTTTTACACATGCTTTGATCAGAGTGGAACCACTAAGGTGCATAACA
TTGTTGACACTAAGGAACACATTTTAATAAGCAAACCTATTATTTTCTGG
CTCATTGCTAAGGTCGCTAAGATTTTTGTCAAACTCAAGGTTGCAGTTGT
TGCTCAATAGGCCACTAAGGTTTTCTCTTGTTCATGTTGTGAACATCTGT
TGTTGAAGAAGAAGTTGCTTTGCTTATCAAAGGCTCAGAGTACAGCAAAT
TTATGAGCAAGGCCAACCTTAGCAACTAGCTTGCTTTAAGTAAAATAATG
TGTATTAAAGAAGGAATATCAACTTTCGTTTAGGAAGACGGCAGTGTGTT
CTATTGTTTAGATGCAAACTTTGGTCTAGTACTCAAAGCGTCTGCTTCCA
AATCAAAGAAACTTGCGATGCGATCTTCCAATTTATTTGTTCCTGATGAA
GATATCGATTCATTCATGGTGAACTATGATGATGCTTTAAAAACAAAGGT
GAgatttttattctattttaaaaAGCAGCGATGCCTAAACATATTTTAAT
TTATTAAATTCTCTAGGAGTgacctttaaaatttttcaaaatcaaatcaa
agcaATCTTAATCTAAGAAGCTGTgaaattaatattttgaccTATAAAAA
TTGAGATGCTATGAGTCCTCATGAGTCCTTATATGTTCTGATATACTGTG
TTACAAAATATTATAATTGAAAGTCATTGTAGTTCTTTAGGAACTTCTTA
CTAGGATTGCAGTAACTTCCAAGCCGGAAACAATCTTCGatcgaaaagaa
aaacaaagaaattaagTGTTACCGGAATTTTCGGAATGTCTTGTAGACAC
GAATTTCCAAAACTCTTCCTAAATATGAGGCATGGTGAAAGGTATTAAAA
TGAGTTGAATTTTATCCCCAACAATTAAATTGAATCTCAAGGAGAATAGA
ATCAAATACAATTTTaatgaagtttgaaaaaagaatttctttccAAGATC
TTCAGATCCATTTTAAGCGCTTGAATCTTGGCAACTTGGTTacttataaa
aataacgtgTAGTATAATTCCTTAGAAATGAATATTTGTGGGAAGATATT
TTCCCGAAAGCAATCTTTGTGGAACTGCTCTGAAATCATAAATCGATCCT
AAATCTGGTCTTTCTTGGACAAAGTTCATctgcaaaattttggcaaaaat
aaatTAACGAAATTTAAGCCAGGGTGAGCTCATTTTCCATATGCTACTCT
TTGGTGCTTAATTTTAGGGGACAATAGAATAAGCGGGACGGGTGGGTACT
CGagaataaaatcaacaaaatcggGGAGGGGTCATAATGTGTCTGATTGG
GGCCTGATTGTGCTGAAGATTCCTTGGAATCTTGGAAAATGAAGCTTTTA
ACCCTTTTTTGGTACTTCGTAGgataaaagtcataaaatgggAGGTCATT
ATTAATGATATCGGGGTTGAAAAATTATTGTAcatcatataaaaattttc
aggctGGGATATGCTGTGTATTTACTTGACCGTTTGTTGGAAGAAAATCA
TGACAAAAGTTTACTCACTCACGTTATATATGACATAGCCTGTGTATTAA
AATCGCATTTGAAGGTATGTACACTTACTGTATTCTTATTTCCAATGTCA
TTCTCAAAGATTATAGCGACGCCGGGTACCTGCTAGTATTAGCGATGTTT
TGCTCTTCATCTATGACTAATGTTCACAAGCAAACCACATTAGACGTTCT
ttgcttttttaaagaaaaagaacacGTTTACGAAGTACAAAGATTTCCAC
TTTGGAATACCAGTTTTTCACTCATATGGTCACAGAGGGGATTGTCAGgt
aataatttttcttctccgCCATTATGATGAATGTATCTTCGTCATCCTGG
AGTGGCAATAAACAAAATTGAAGCACGCTTTGATGATGCCCTTATTATCA
CCCTCCGTTACACTAGAAAATATCAGTAATACACTCTTCttgagatgcat
aaatttattgttgtcctcgttttcaaacagatttcattgttataaaatta
catattcacaatgataattgtgttgtttacacctcatgagacattttgaa
tttcaagtacTTTTGTTTTAGAGttaatgtttgccttttgggaatttaaa
ttggtttaaatgtataatttcgtagcaatgaaatctgtttgaaaacgagg
acaacaataaatttatgcatctcgagaagagtgtattcccTGAACTTTAT
TGTTTATCCAGGTAAAGAATTCCATTCGTCGGCTTGAAACGTTTGGTTTG
ATGGATGGAGAACTGATGGAGCGCCTGTGGTCTTACCTGAGGTCGTTTTC
AAAGATAACCAAAGAAATGACTCCGGCGCATCGAACTGACTTACTCAGTG
ATGCCTTGATGCACTTTGGCTCAAAGAAAATGGGAAACATAGGCAAGTAC
TTTAAGAAACATTCGAGATCCATCTTATAAATTCTTTGACTTGTGACGTT
TTATTTAGACTAAAACACAAGCAtactatttttcaatttttttatttttc
gtatAAGCTTGCACAATTTTTGCTTTAGGGAAATATCTTGTATTTTTGCG
TAACAAGGCGATCGAAACCGTGAATTCCTGTGAGTCGGAGATTAAAGCGA
TATGCTCTAAACTGACTGGTAATGGTTCCTTTCATTGTCATTCAGATCGT
GTCTACAATCCATTATGGTATAAATAAGTATTTTGATTCCCTACTGTTTA
TTTACTAGTTGTAGGAAAACTATAATTATTATACCTTTATCTGCGGGAGA
AAACTCGTTCGTCAGTTCTTGAAATTCAATCACATGAAAGTCTCTCCCCT
CTAGGTAAATCGTAATGATCCCTATCATAAAAAGGAAATAAAGAGTATTG
TATTCagtgaaataaaaaagctactACTTAGCAATTCATCAATCTCATTC
CGTTGTAGAAGTTAAAGTGGATGAGAAAGTCATTGAAGCTTGGAAACGAG
AGGAAGACAGTGTTGTAAACAAGGACAAAAGGCCACTGCAACCAGGTCAT
TACTGCTTCTACCACAGCACTTTTCTTGGACTACTTAATCTATTTACTTA
CTTTAATTTATCTTAATTTGCTTGAGCGCTTTACGTTGTAACAGAACTTA
AAGAATAATGATTTTAGGCTTTTAGAACcattttttgtattatttttcaG
ATATACAACCGATCTGTATTTTGAGGACATCTAGGCAACTATTGACAAAA
GCATTGACGGTACTCTACTGACGGACACGACAAATAATATTCTAGGACAA
ATCTTCAAACGTTCAGCCAATTTGAAAACAATGACAGTACTCCTTTGACA
TTGacgaataaataaaataataacgTAGCGTTAGAATTTTGTAGCATTTT
ACTTCTTTATAATTAGAGGTAAGCTTATAATTCAGCTACGTGTTATAGGC
ATTGGGTTTAAAGTCCCGAAGGGGCTAGACGTGAAACACCTGGATGGGAC
ATTTCCTAGCTATTTAATCTTTATCTTTATCCAGAACACCTGCGtatggt
ttttacacaaatgccgGATTGAAATTAAATCTATCactagatttcgaaaa
atatagtacttgaaaacaaagaattaaGTGGTTTCACTTTTCTTGCCTGT
AAACAAAagtttctactctagcccttcgggctttaaacttaaTGGTAATA
GCAATGtgcgtttttctttttagatgcTGCCGACTGGAGACAAATTTATT
ACGAAAAGCTTAAAACCTTCAACAGGGAATCTTCTTTAGCACTGATGAGT
GAAAAAGTATCTGATGTTGCCTTACATCAACGAAAAGCAAAACGGTAATT
TAGGTTTTAAGAGTTACCATTATCCATGCTttttaaaattacttttttat
tttgttacacATTTTAAATCAAGAACAAACGTTTAGTAACTATGACGGAC
CGATTACCCTTAAAAGTATATTCAAATCTAAGGTATCGAGCCCTTTATTC
ATGTGAATAGCGTACCGCGgtaaatctaaaaatagacttTATTTTTGCCA
TGATCATTACTTTCCATATGTTTGTATGAgtagttccaatcccatcaacg
tTTGCGTTAATTTCTTTTgtacgttaattgcatcctatGACAAAAGATAT
NCTTTCCATATGTTTGTATGAgtagttccaatcccatcaacgtTTGCGTT
AATTTCTTTTgtacgttaattgcatcctatGACAAAAGATATGTAGCAAC
GTGCACGTTTTTTAAATTGAGACGAATTGGATTGTGGAATTGCAATTTGT
ACAAAAATAATGGAAACTGAAAAGTTTAAAACACGCATAACATCTTTCTC
CCTTTCCCTATGAAactgtttggtaaatttttgtttggCTGAAAATTATA
TATTTCTTTCATTAGCATCGAATCAAGTTTAAATACATTTGAAAAAGAGC
ATATGATTGCTAAACGATGGCTTCCAGCTTCTCAAGAATTTAGACTTCAA
CATATGAAATATCTAaagcaaaaatcaaaagaaaccatCTCAACTTTGTA
TAGCCGATGCTCTGAGAGAATGATGCTTTTAGTACTGAAGAGACGATATG
CAGGTGCATACatacattcttttatttttacaggCAGTGTTGAATTCAAT
TTGTACTTGTACTTGgtaattttggtcggggaagaTTGATCAAAATGTCA
CTGACTAAAATTTCCCTCCGACTTATTTTCCCCCGAAGGTATACGATAAC
GATATCAAccagtttgtttactttttattttaaaatcgtACATAATTTTT
CATAGATGGATCGGCCATTGCCACAAGACTATCCAAACAGATCAACAGAG
TTTGCAAGGAAATAAAGGATTTGACGGCTTCTTTCAACAACATTAATACT
GAAATATCACTGGATTTTAAGACCGTTAGCTACATAGAAGTATTAGACGT
TAAGTCCCCCATCTATAATGATACCActctttttttcaaagtaagTGTCT
actttgattttacttttgattttgttttagaaTTGAATTGGAATTTGTTT
CGTGGAGTACTATTTCACAAATGAAGAAATCTTTTGTTCAATATTAGACC
AAATTTGCCCTGAAATGGCCAAATTTAAGTACATATTGACCATAATTTTG
ACGTAAATAAAAGTTTCATTTGATGTGTTTAAAAATCTTATATCTTACTT
AGGTAAAATGTTCTTCAGTTCCATACACGGTCATCAAATCTCTTGTTCAA
TATCATATGCGGAAACAACGAGCACAAGAAGAAATATCGCTTGTTGAGCG
TGAGATGGAAGTCACAGTCTCTTATTGGGAAAAACAACTTTGTTTGCTTA
CTGCCTGTTTGGGGCGTCAAACTTTAAAAGGCATCAAATATTTGCTAACC
GAAAGAATACGTGCCATTGAACTTTTCATTTATGAGTtgaaaaagtcttt
ttcaacTGTCGTAGCTAACCCTTCATTTGACATCAAGAATAACCAAGTTT
CCCATGAAATGCCAGATGAGGATGAATATTTCAGTGACTTTTCTGATTCA
AGCTATTCAGGAATTGATAGTGAAGAGAATGAGGAAGTTgacctttattt
ttgaaattatataagATACAACAATCACGATACGGTTTCGGTTTAAAGAA
TCTCGAAGATTTTTACGTGCTTGAAATTTTTAGCTGCACTTGATCCACCT
GCTTTtcctcaaaaaaaaatcataaaattcgatttttgagattttcgtCA
CGGATCCTAACGAATATTTTAATCAGATTCATTTTCGCGAGTTTGAACTT
CATTcttaataagcagatattcaataggtaaaagttggttattgagattt
attaacccgaggtgatgaaTATTCAACGAGTTGAATAtcatcaccgaggg
ttaataaatccaataaccaacgtaaaacctattgaatatacgTTTTATTC
TATAACTAAaggcaaaaacaaaagaaaaacttgaaacattttttggagtc
ccattttttacaaaataaaaagtgCTCACAAAATCGCATGttcgaaattt
ttctttttatcaactttttaattactttaagtgaaattgacaatagaact
attttaaaagttttttctaGCAAGAGTAAACatgcaaaaatccaaaaaaa
aaattgaatgaaaaaattgcCATGTGATAATATAGCCATGGAGCCATGTG
ATATCGTTAATTATCAAACGGcagtttttgcctacaggtatagaATAGTA
TTTGTTATTATTTAttaaaccttcaactactcaaaaatGTATAGATAGAT
GatatattttattatatataaCTAAACGTTTTTATGGACTTAGGCAAACT
CTTAAATTTTATTGCAAACTTGTTTTCCAAAGTTGAGATTTTCCAATTCA
AAGCGTAAATTTCTAGTTTTTCATGGTCCCTTTccttttttactaaaaaa
tttacattagAATATCTCAACTAACTTTGAAaggtcaattttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024125XLOC_024125Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039854-exon-sc0002223-1491911889:10081..10466TCONS_00039854-exon-sc0002223-1491911889:10081..10466Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:10081..10466TCONS_00039854-exon-sc0002223-1510915933:10081..10466Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:10081..10466TCONS_00039854-exon-sc0002223-1575043694:10081..10466Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:10692..11181TCONS_00039854-exon-sc0002223-1491911889:10692..11181Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:10692..11181TCONS_00039854-exon-sc0002223-1510915933:10692..11181Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:10692..11181TCONS_00039854-exon-sc0002223-1575043694:10692..11181Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:11646..11751TCONS_00039854-exon-sc0002223-1491911889:11646..11751Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:11646..11751TCONS_00039854-exon-sc0002223-1510915933:11646..11751Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:11646..11751TCONS_00039854-exon-sc0002223-1575043694:11646..11751Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:12303..12523TCONS_00039854-exon-sc0002223-1491911889:12303..12523Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:12303..12523TCONS_00039854-exon-sc0002223-1510915933:12303..12523Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:12303..12523TCONS_00039854-exon-sc0002223-1575043694:12303..12523Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:12742..12873TCONS_00039854-exon-sc0002223-1491911889:12742..12873Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:12742..12873TCONS_00039854-exon-sc0002223-1510915933:12742..12873Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:12742..12873TCONS_00039854-exon-sc0002223-1575043694:12742..12873Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:13214..13378TCONS_00039854-exon-sc0002223-1491911889:13214..13378Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:13214..13378TCONS_00039854-exon-sc0002223-1510915933:13214..13378Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:13214..13378TCONS_00039854-exon-sc0002223-1575043694:13214..13378Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:14383..14494TCONS_00039854-exon-sc0002223-1491911889:14383..14494Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:14383..14494TCONS_00039854-exon-sc0002223-1510915933:14383..14494Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:14383..14494TCONS_00039854-exon-sc0002223-1575043694:14383..14494Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:14645..14728TCONS_00039854-exon-sc0002223-1491911889:14645..14728Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:14645..14728TCONS_00039854-exon-sc0002223-1510915933:14645..14728Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:14645..14728TCONS_00039854-exon-sc0002223-1575043694:14645..14728Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:15142..15322TCONS_00039854-exon-sc0002223-1491911889:15142..15322Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:15142..15322TCONS_00039854-exon-sc0002223-1510915933:15142..15322Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:15142..15322TCONS_00039854-exon-sc0002223-1575043694:15142..15322Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:15459..15548TCONS_00039854-exon-sc0002223-1491911889:15459..15548Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:15459..15548TCONS_00039854-exon-sc0002223-1510915933:15459..15548Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:15459..15548TCONS_00039854-exon-sc0002223-1575043694:15459..15548Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:15839..15925TCONS_00039854-exon-sc0002223-1491911889:15839..15925Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:15839..15925TCONS_00039854-exon-sc0002223-1510915933:15839..15925Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:15839..15925TCONS_00039854-exon-sc0002223-1575043694:15839..15925Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:16604..16724TCONS_00039854-exon-sc0002223-1491911889:16604..16724Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:16604..16724TCONS_00039854-exon-sc0002223-1510915933:16604..16724Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:16604..16724TCONS_00039854-exon-sc0002223-1575043694:16604..16724Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:17296..17483TCONS_00039854-exon-sc0002223-1491911889:17296..17483Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:17296..17483TCONS_00039854-exon-sc0002223-1510915933:17296..17483Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:17296..17483TCONS_00039854-exon-sc0002223-1575043694:17296..17483Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:17686..17870TCONS_00039854-exon-sc0002223-1491911889:17686..17870Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:17686..17870TCONS_00039854-exon-sc0002223-1510915933:17686..17870Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:17686..17870TCONS_00039854-exon-sc0002223-1575043694:17686..17870Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1491911889:18083..19373TCONS_00039854-exon-sc0002223-1491911889:18083..19373Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1510915933:18083..19373TCONS_00039854-exon-sc0002223-1510915933:18083..19373Clytia hemisphaericaexon
TCONS_00039854-exon-sc0002223-1575043694:18083..19373TCONS_00039854-exon-sc0002223-1575043694:18083..19373Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002223supercontigsc0002223:10081..19373 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0858741	0	0.046906	0	0	0	1.82233e-08	0.00010582	5.05651e-08	0	0.00711108	0.0019423	1.41462e-08	0	0	0	0	0	0	0	0	0	0.101941	0	0	0	0	0	0.0887471
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039854 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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