TCONS_00039861 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039861
Unique NameTCONS_00039861
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3597

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039861 ID=TCONS_00039861|Name=TCONS_00039861|organism=Clytia hemisphaerica|type=transcript|length=3597bp
GTTTAAGGTTTAAAATAATGACTGGAACACAAAGAACATTCAGAAAGAAA
GTTGTCAAAGTTAAAAGCACAAAAATAAGAAATGGTAGAAAAAGGACTAC
TTATGTCCAACCTTTCATGAGCAGTTCATCTCAATCAAAGTACTTGAAAA
ATGAGTCTTTCAGTCCTTGTATATCTGGGGATGAGGATGAGAGCTCAAAA
GAGGATAACTTTGTCACTGATTCAGTAAACAAAACAAACGATGATTCAAA
AAGGTCAAAGTACCAGACAATGAAGGAAAAGGAGCTTGGGGCATGGGATA
CCTTCTCACCTGAAGTGATAAGGAAGTACGCAGAGAAGTTCGATGAAATG
CTACCCACAATATGTGTTATCTGTGAAACAAAATTACTTGAAAATTGTGT
ATGGTGCAAAACATGTGGGCCAAGAACCACATATTGCAGTGGATGTGCTG
TTAAGATCCATAAGCACATGCCTTTTCATTGTCTGTATGAAATAAATGAT
GATGGGTTTCACgaatttcaagtcaattatGAGCTGAAAAGCAAACATAC
AAGCCAATGTCTGTATGCCAAGCCTAGATTATTGACAGTAATTTCAGAAA
CAGGACTACATCATCAGTGCTCTATCTATTTTTGTGAATGTGAAAGTGAT
TTGGAAACACTACTTCGTCTTGACTTGTGGCCTGTGACTCCAATCAAACC
AAATACGGTGGTGTCTATAGATCTCCTACACCTTTTCATCTCGTTGCAGT
TGGAGGGGAAGAtatcttttcattctttttgtgaTGGTCTAGCGTGGAAA
AAAGGAATGGGAAACACTGTCTTGagaaGATATCTAAATCGTTTGGAGAA
GACTGACACTATCGATCAGTTTAGGAACTTTCGGAGGCAACTTCTTAACC
TCAGAAGCATTTGTGAAGACTTCACTGGACTAGAAGAGTGTGCTGCTTGT
CCCAAAGAAGACGGCAGTGTGTTCTATTGTTTAGATGCAAACTTTGGTCT
AGTACTCAAAGCGTCTGCTTCCAAATCAAAGAAACTTGCGATGCGATCTT
CCAATTTATTTGTTCCTGATGAAGATATCGATTCATTCATGGTGAACTAT
GATGATGCTTTAAAAACAAAGGATTGCAGTAACTTCCAAGCCGGAAACAA
TCTTCGatcgaaaagaaaaacaaagaaattaagTGTTACCGGAATTTTCG
GAATGTCTTGTAGACACGAATTTCCAAAACTCTTCCTAAATATGAGGCAT
GGTGAAAGgctGGGATATGCTGTGTATTTACTTGACCGTTTGTTGGAAGA
AAATCATGACAAAAGTTTACTCACTCACGTTATATATGACATAGCCTGTG
TATTAAAATCGCATTTGAAGaaaaagaacacGTTTACGAAGTACAAAGAT
TTCCACTTTGGAATACCAGTTTTTCACTCATATGGTCACAGAGGGGATTG
TCAGGTAAAGAATTCCATTCGTCGGCTTGAAACGTTTGGTTTGATGGATG
GAGAACTGATGGAGCGCCTGTGGTCTTACCTGAGGTCGTTTTCAAAGATA
ACCAAAGAAATGACTCCGGCGCATCGAACTGACTTACTCAGTGATGCCTT
GATGCACTTTGGCTCAAAGAAAATGGGAAACATAGGGAAATATCTTGTAT
TTTTGCGTAACAAGGCGATCGAAACCGTGAATTCCTGTGAGTCGGAGATT
AAAGCGATATGCTCTAAACTGACTGAAGTTAAAGTGGATGAGAAAGTCAT
TGAAGCTTGGAAACGAGAGGAAGACAGTGTTGTAAACAAGGACAAAAGGC
CACTGCAACCAGatgcTGCCGACTGGAGACAAATTTATTACGAAAAGCTT
AAAACCTTCAACAGGGAATCTTCTTTAGCACTGATGAGTGAAAAAGTATC
TGATGTTGCCTTACATCAACGAAAAGCAAAACGCATCGAATCAAGTTTAA
ATACATTTGAAAAAGAGCATATGATTGCTAAACGATGGCTTCCAGCTTCT
CAAGAATTTAGACTTCAACATATGAAATATCTAaagcaaaaatcaaaaga
aaccatCTCAACTTTGTATAGCCGATGCTCTGAGAGAATGATGCTTTTAG
TACTGAAGAGACGATATGCAGATGGATCGGCCATTGCCACAAGACTATCC
AAACAGATCAACAGAGTTTGCAAGGAAATAAAGGATTTGACGGCTTCTTT
CAACAACATTAATACTGAAATATCACTGGATTTTAAGACCGTTAGCTACA
TAGAAGTATTAGACGTTAAGTCCCCCATCTATAATGATACCActcttttt
ttcaaaGTAAAATGTTCTTCAGTTCCATACACGGTCATCAAATCTCTTGT
TCAATATCATATGCGGAAACAACGAGCACAAGAAGAAATATCGCTTGTTG
AGCGTGAGATGGAAGTCACAGTCTCTTATTGGGAAAAACAACTTTGTTTG
CTTACTGCCTGTTTGGGGCGTCAAACTTTAAAAGGCATCAAATATTTGCT
AACCGAAAGAATACGTGCCATTGAACTTTTCATTTATGAGTtgaaaaagt
ctttttcaacTGTCGTAGCTAACCCTTCATTTGACATCAAGAATAACCAA
GTTTCCCATGAAATGCCAGATGAGGATGAATATTTCAGTGACTTTTCTGA
TTCAAGCTATTCAGGAATTGATAGTGAAGAGAATGAGGAAGTTgaccttt
atttttgaaattatataagATACAACAATCACGATACGGTTTCGGTTTAA
AGAATCTCGAAGATTTTTACGTGCTTGAAATTTTTAGCTGCACTTGATCC
ACCTGCTTTtcctcaaaaaaaaatcataaaattcgatttttgagattttc
gtCACGGATCCTAACGAATATTTTAATCAGATTCATTTTCGCGAGTTTGA
ACTTCATTcttaataagcagatattcaataggtaaaagttggttattgag
atttattaacccgaggtgatgaaTATTCAACGAGTTGAATAtcatcaccg
agggttaataaatccaataaccaacgtaaaacctattgaatatacgTTTT
ATTCTATAACTAAaggcaaaaacaaaagaaaaacttgaaacattttttgg
agtcccattttttacaaaataaaaagtgCTCACAAAATCGCATGttcgaa
atttttctttttatcaactttttaattactttaagtgaaattgacaatag
aactattttaaaagttttttctaGCAAGAGTAAACatgcaaaaatccaaa
aaaaaaattgaatgaaaaaattgcCATGTGATAATATAGCCATGGAGCCA
TGTGATATCGTTAATTATCAAACGGcagtttttgcctacaggtatagaAT
AGTATTTGTTATTATTTAttaaaccttcaactactcaaaaatGTATAGAT
AGATGatatattttattatatataaCTAAACGTTTTTATGGACTTAGGCA
AACTCTTAAATTTTATTGCAAACTTGTTTTCCAAAGTTGAGATTTTCCAA
TTCAAAGCGTAAATTTCTAGTTTTTCATGGTCCCTTTccttttttactaa
aaaatttacattagAATATCTCAACTAACTTTGAAaggtcaattttc
Run BLAST on NCBI

transcript from alignment at sc0002223:10685..19373+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039861 ID=TCONS_00039861|Name=TCONS_00039861|organism=Clytia hemisphaerica|type=transcript|length=8689bp|location=Sequence derived from alignment at sc0002223:10685..19373+ (Clytia hemisphaerica)
GTTTAAGGTTTAAAATAATGACTGGAACACAAAGAACATTCAGAAAGAAA
GTTGTCAAAGTTAAAAGCACAAAAATAAGAAATGGTAGAAAAAGGACTAC
TTATGTCCAACCTTTCATGAGCAGTTCATCTCAATCAAAGTACTTGAAAA
ATGAGTCTTTCAGTCCTTGTATATCTGGGGATGAGGATGAGAGCTCAAAA
GAGGATAACTTTGTCACTGATTCAGTAAACAAAACAAACGATGATTCAAA
AAGGTCAAAGTACCAGACAATGAAGGAAAAGGAGCTTGGGGCATGGGATA
CCTTCTCACCTGAAGTGATAAGGAAGTACGCAGAGAAGTTCGATGAAATG
CTACCCACAATATGTGTTATCTGTGAAACAAAATTACTTGAAAATTGTGT
ATGGTGCAAAACATGTGGGCCAAGAACCACATATTGCAGTGGATGTGCTG
TTAAGATCCATAAGCACATGCCTTTTCATTGTCTGTATGAAATAAATGTA
AGTATTCTAATCCTAGAGTAACTGGTAATAGGGTATACTCTTGGGTCTCA
AATGAAATAAACATACAGGtacatttaaaataaattaagaTTATTTTTGA
GGTCTTTATGATAACCCAacttgattctttttttgtgaAGCTGGACCCTT
GCCTGATTACATATTGAGATAATTTTTTGCTCAGGGCTGAAGTGGTCAAA
GGGATTTCATATTTTGATACCAACGGATGGATTTCTGTTTCAGGGCTGGA
GCCTTAGCAGCTTAGGTTGCTTATGAAAGTAATGTATAGAAAAAGCGTTC
TCTTCTAGAAAGCATGGAATGTACAGGAAAGTAGTTGCAGATTTCTTTCC
TGTCATTTGCGCTAGATTCAGGGTTTAGTGGTCTTTTGAAGAAGTGACAA
TAATCAGACTGGccatcaaaaaacttttgatttatATAATTTCTTCCTAA
TCTATTTGAAGGATGATGGGTTTCACgaatttcaagtcaattatGAGCTG
AAAAGCAAACATACAAGCCAATGTCTGTATGCCAAGCCTAGATTATTGAC
AGTAATTTCAGAAACAGGTATTAAAAATCCTTTACATGTCATTACTTTAA
AGGATCACATGGTGTCATGCAAGTTTTTTGGGTCCCCCATCCGGTGTTGA
AAACCCCCATCTGGCTTTCCTTCCCCATTACTGTTTGATTTCTGGTCTCT
CGATCTGAAAATTACTTATATAAAGTTGTTGGTTCACATCAAAATGAATT
ATAAATGATAAATTCATGCAAAAACATTATacaaaaaaagatattcatgT
AATCAATAAGTAAGATTGATACCTTTCTTTGATGTTTaccttggaaaaaa
aattcatccccTCCCAGACCAACAATGTGATATTAATTTATTCTCTGATA
AAAACAGGCTACCTGATAATCTAATTAAATTGTTCATGCAAATAtccttt
tgaaagttttaaaactttGGGTCTATGGTTCTTTTTTTAAACGTTATGAT
TTTTCATAGTTACAGAATTTCAGCATTATGTTCTATAAGACATAGATACA
AATAGGGGGGAAAGATAAAATctatatatttgaataattttttttcaaaa
ttacgtCATCTTTTCTAGGACTACATCATCAGTGCTCTATCTATTTTTGT
GAATGTGAAAGTGATTTGGAAACACTACTTCGTCTTGACTTGTGGCCTGT
GACTCCAATCAAACCAAATACGGTGGTGTCTATAGATCTCCTACACCTTT
TCATCTCGTTGCAGTTGGAGGGGAAGAtatcttttcattctttttgtgaT
GGTCTAGCGTGGAAAAAAGGAATGGGAAACACTGTCTTGGTAAATATTTT
CATGATAAACTAGTATTAGTtgcccttcgtggaaacaattttTTAGGTGT
CTAAAGGATACTGAATATTCGGAGCATGCCACTTAAAAtatatgttatta
ttattactttgcttgatttattttttaataaatagGCTCTTACACTCGTT
GAGATATTTTCAATTATTCTTGTTTTCTGGCGCttgagtttttattttta
tttttagagaaGATATCTAAATCGTTTGGAGAAGACTGACACTATCGATC
AGTTTAGGAACTTTCGGAGGCAACTTCTTAACCTCAGAAGCATTTGTGAA
GACTTCACTGGACTAGAAGAGTGTGCTGCTTGTCCCAAAGTAAGAATTAC
TTTTACACATGCTTTGATCAGAGTGGAACCACTAAGGTGCATAACATTGT
TGACACTAAGGAACACATTTTAATAAGCAAACCTATTATTTTCTGGCTCA
TTGCTAAGGTCGCTAAGATTTTTGTCAAACTCAAGGTTGCAGTTGTTGCT
CAATAGGCCACTAAGGTTTTCTCTTGTTCATGTTGTGAACATCTGTTGTT
GAAGAAGAAGTTGCTTTGCTTATCAAAGGCTCAGAGTACAGCAAATTTAT
GAGCAAGGCCAACCTTAGCAACTAGCTTGCTTTAAGTAAAATAATGTGTA
TTAAAGAAGGAATATCAACTTTCGTTTAGGAAGACGGCAGTGTGTTCTAT
TGTTTAGATGCAAACTTTGGTCTAGTACTCAAAGCGTCTGCTTCCAAATC
AAAGAAACTTGCGATGCGATCTTCCAATTTATTTGTTCCTGATGAAGATA
TCGATTCATTCATGGTGAACTATGATGATGCTTTAAAAACAAAGGTGAga
tttttattctattttaaaaAGCAGCGATGCCTAAACATATTTTAATTTAT
TAAATTCTCTAGGAGTgacctttaaaatttttcaaaatcaaatcaaagca
ATCTTAATCTAAGAAGCTGTgaaattaatattttgaccTATAAAAATTGA
GATGCTATGAGTCCTCATGAGTCCTTATATGTTCTGATATACTGTGTTAC
AAAATATTATAATTGAAAGTCATTGTAGTTCTTTAGGAACTTCTTACTAG
GATTGCAGTAACTTCCAAGCCGGAAACAATCTTCGatcgaaaagaaaaac
aaagaaattaagTGTTACCGGAATTTTCGGAATGTCTTGTAGACACGAAT
TTCCAAAACTCTTCCTAAATATGAGGCATGGTGAAAGGTATTAAAATGAG
TTGAATTTTATCCCCAACAATTAAATTGAATCTCAAGGAGAATAGAATCA
AATACAATTTTaatgaagtttgaaaaaagaatttctttccAAGATCTTCA
GATCCATTTTAAGCGCTTGAATCTTGGCAACTTGGTTacttataaaaata
acgtgTAGTATAATTCCTTAGAAATGAATATTTGTGGGAAGATATTTTCC
CGAAAGCAATCTTTGTGGAACTGCTCTGAAATCATAAATCGATCCTAAAT
CTGGTCTTTCTTGGACAAAGTTCATctgcaaaattttggcaaaaataaat
TAACGAAATTTAAGCCAGGGTGAGCTCATTTTCCATATGCTACTCTTTGG
TGCTTAATTTTAGGGGACAATAGAATAAGCGGGACGGGTGGGTACTCGag
aataaaatcaacaaaatcggGGAGGGGTCATAATGTGTCTGATTGGGGCC
TGATTGTGCTGAAGATTCCTTGGAATCTTGGAAAATGAAGCTTTTAACCC
TTTTTTGGTACTTCGTAGgataaaagtcataaaatgggAGGTCATTATTA
ATGATATCGGGGTTGAAAAATTATTGTAcatcatataaaaattttcaggc
tGGGATATGCTGTGTATTTACTTGACCGTTTGTTGGAAGAAAATCATGAC
AAAAGTTTACTCACTCACGTTATATATGACATAGCCTGTGTATTAAAATC
GCATTTGAAGGTATGTACACTTACTGTATTCTTATTTCCAATGTCATTCT
CAAAGATTATAGCGACGCCGGGTACCTGCTAGTATTAGCGATGTTTTGCT
CTTCATCTATGACTAATGTTCACAAGCAAACCACATTAGACGTTCTttgc
ttttttaaagaaaaagaacacGTTTACGAAGTACAAAGATTTCCACTTTG
GAATACCAGTTTTTCACTCATATGGTCACAGAGGGGATTGTCAGgtaata
atttttcttctccgCCATTATGATGAATGTATCTTCGTCATCCTGGAGTG
GCAATAAACAAAATTGAAGCACGCTTTGATGATGCCCTTATTATCACCCT
CCGTTACACTAGAAAATATCAGTAATACACTCTTCttgagatgcataaat
ttattgttgtcctcgttttcaaacagatttcattgttataaaattacata
ttcacaatgataattgtgttgtttacacctcatgagacattttgaatttc
aagtacTTTTGTTTTAGAGttaatgtttgccttttgggaatttaaattgg
tttaaatgtataatttcgtagcaatgaaatctgtttgaaaacgaggacaa
caataaatttatgcatctcgagaagagtgtattcccTGAACTTTATTGTT
TATCCAGGTAAAGAATTCCATTCGTCGGCTTGAAACGTTTGGTTTGATGG
ATGGAGAACTGATGGAGCGCCTGTGGTCTTACCTGAGGTCGTTTTCAAAG
ATAACCAAAGAAATGACTCCGGCGCATCGAACTGACTTACTCAGTGATGC
CTTGATGCACTTTGGCTCAAAGAAAATGGGAAACATAGGCAAGTACTTTA
AGAAACATTCGAGATCCATCTTATAAATTCTTTGACTTGTGACGTTTTAT
TTAGACTAAAACACAAGCAtactatttttcaatttttttatttttcgtat
AAGCTTGCACAATTTTTGCTTTAGGGAAATATCTTGTATTTTTGCGTAAC
AAGGCGATCGAAACCGTGAATTCCTGTGAGTCGGAGATTAAAGCGATATG
CTCTAAACTGACTGGTAATGGTTCCTTTCATTGTCATTCAGATCGTGTCT
ACAATCCATTATGGTATAAATAAGTATTTTGATTCCCTACTGTTTATTTA
CTAGTTGTAGGAAAACTATAATTATTATACCTTTATCTGCGGGAGAAAAC
TCGTTCGTCAGTTCTTGAAATTCAATCACATGAAAGTCTCTCCCCTCTAG
GTAAATCGTAATGATCCCTATCATAAAAAGGAAATAAAGAGTATTGTATT
CagtgaaataaaaaagctactACTTAGCAATTCATCAATCTCATTCCGTT
GTAGAAGTTAAAGTGGATGAGAAAGTCATTGAAGCTTGGAAACGAGAGGA
AGACAGTGTTGTAAACAAGGACAAAAGGCCACTGCAACCAGGTCATTACT
GCTTCTACCACAGCACTTTTCTTGGACTACTTAATCTATTTACTTACTTT
AATTTATCTTAATTTGCTTGAGCGCTTTACGTTGTAACAGAACTTAAAGA
ATAATGATTTTAGGCTTTTAGAACcattttttgtattatttttcaGATAT
ACAACCGATCTGTATTTTGAGGACATCTAGGCAACTATTGACAAAAGCAT
TGACGGTACTCTACTGACGGACACGACAAATAATATTCTAGGACAAATCT
TCAAACGTTCAGCCAATTTGAAAACAATGACAGTACTCCTTTGACATTGa
cgaataaataaaataataacgTAGCGTTAGAATTTTGTAGCATTTTACTT
CTTTATAATTAGAGGTAAGCTTATAATTCAGCTACGTGTTATAGGCATTG
GGTTTAAAGTCCCGAAGGGGCTAGACGTGAAACACCTGGATGGGACATTT
CCTAGCTATTTAATCTTTATCTTTATCCAGAACACCTGCGtatggttttt
acacaaatgccgGATTGAAATTAAATCTATCactagatttcgaaaaatat
agtacttgaaaacaaagaattaaGTGGTTTCACTTTTCTTGCCTGTAAAC
AAAagtttctactctagcccttcgggctttaaacttaaTGGTAATAGCAA
TGtgcgtttttctttttagatgcTGCCGACTGGAGACAAATTTATTACGA
AAAGCTTAAAACCTTCAACAGGGAATCTTCTTTAGCACTGATGAGTGAAA
AAGTATCTGATGTTGCCTTACATCAACGAAAAGCAAAACGGTAATTTAGG
TTTTAAGAGTTACCATTATCCATGCTttttaaaattacttttttattttg
ttacacATTTTAAATCAAGAACAAACGTTTAGTAACTATGACGGACCGAT
TACCCTTAAAAGTATATTCAAATCTAAGGTATCGAGCCCTTTATTCATGT
GAATAGCGTACCGCGgtaaatctaaaaatagacttTATTTTTGCCATGAT
CATTACTTTCCATATGTTTGTATGAgtagttccaatcccatcaacgtTTG
CGTTAATTTCTTTTgtacgttaattgcatcctatGACAAAAGATATNCTT
TCCATATGTTTGTATGAgtagttccaatcccatcaacgtTTGCGTTAATT
TCTTTTgtacgttaattgcatcctatGACAAAAGATATGTAGCAACGTGC
ACGTTTTTTAAATTGAGACGAATTGGATTGTGGAATTGCAATTTGTACAA
AAATAATGGAAACTGAAAAGTTTAAAACACGCATAACATCTTTCTCCCTT
TCCCTATGAAactgtttggtaaatttttgtttggCTGAAAATTATATATT
TCTTTCATTAGCATCGAATCAAGTTTAAATACATTTGAAAAAGAGCATAT
GATTGCTAAACGATGGCTTCCAGCTTCTCAAGAATTTAGACTTCAACATA
TGAAATATCTAaagcaaaaatcaaaagaaaccatCTCAACTTTGTATAGC
CGATGCTCTGAGAGAATGATGCTTTTAGTACTGAAGAGACGATATGCAGG
TGCATACatacattcttttatttttacaggCAGTGTTGAATTCAATTTGT
ACTTGTACTTGgtaattttggtcggggaagaTTGATCAAAATGTCACTGA
CTAAAATTTCCCTCCGACTTATTTTCCCCCGAAGGTATACGATAACGATA
TCAAccagtttgtttactttttattttaaaatcgtACATAATTTTTCATA
GATGGATCGGCCATTGCCACAAGACTATCCAAACAGATCAACAGAGTTTG
CAAGGAAATAAAGGATTTGACGGCTTCTTTCAACAACATTAATACTGAAA
TATCACTGGATTTTAAGACCGTTAGCTACATAGAAGTATTAGACGTTAAG
TCCCCCATCTATAATGATACCActctttttttcaaagtaagTGTCTactt
tgattttacttttgattttgttttagaaTTGAATTGGAATTTGTTTCGTG
GAGTACTATTTCACAAATGAAGAAATCTTTTGTTCAATATTAGACCAAAT
TTGCCCTGAAATGGCCAAATTTAAGTACATATTGACCATAATTTTGACGT
AAATAAAAGTTTCATTTGATGTGTTTAAAAATCTTATATCTTACTTAGGT
AAAATGTTCTTCAGTTCCATACACGGTCATCAAATCTCTTGTTCAATATC
ATATGCGGAAACAACGAGCACAAGAAGAAATATCGCTTGTTGAGCGTGAG
ATGGAAGTCACAGTCTCTTATTGGGAAAAACAACTTTGTTTGCTTACTGC
CTGTTTGGGGCGTCAAACTTTAAAAGGCATCAAATATTTGCTAACCGAAA
GAATACGTGCCATTGAACTTTTCATTTATGAGTtgaaaaagtctttttca
acTGTCGTAGCTAACCCTTCATTTGACATCAAGAATAACCAAGTTTCCCA
TGAAATGCCAGATGAGGATGAATATTTCAGTGACTTTTCTGATTCAAGCT
ATTCAGGAATTGATAGTGAAGAGAATGAGGAAGTTgacctttatttttga
aattatataagATACAACAATCACGATACGGTTTCGGTTTAAAGAATCTC
GAAGATTTTTACGTGCTTGAAATTTTTAGCTGCACTTGATCCACCTGCTT
TtcctcaaaaaaaaatcataaaattcgatttttgagattttcgtCACGGA
TCCTAACGAATATTTTAATCAGATTCATTTTCGCGAGTTTGAACTTCATT
cttaataagcagatattcaataggtaaaagttggttattgagatttatta
acccgaggtgatgaaTATTCAACGAGTTGAATAtcatcaccgagggttaa
taaatccaataaccaacgtaaaacctattgaatatacgTTTTATTCTATA
ACTAAaggcaaaaacaaaagaaaaacttgaaacattttttggagtcccat
tttttacaaaataaaaagtgCTCACAAAATCGCATGttcgaaatttttct
ttttatcaactttttaattactttaagtgaaattgacaatagaactattt
taaaagttttttctaGCAAGAGTAAACatgcaaaaatccaaaaaaaaaat
tgaatgaaaaaattgcCATGTGATAATATAGCCATGGAGCCATGTGATAT
CGTTAATTATCAAACGGcagtttttgcctacaggtatagaATAGTATTTG
TTATTATTTAttaaaccttcaactactcaaaaatGTATAGATAGATGata
tattttattatatataaCTAAACGTTTTTATGGACTTAGGCAAACTCTTA
AATTTTATTGCAAACTTGTTTTCCAAAGTTGAGATTTTCCAATTCAAAGC
GTAAATTTCTAGTTTTTCATGGTCCCTTTccttttttactaaaaaattta
cattagAATATCTCAACTAACTTTGAAaggtcaattttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024125XLOC_024125Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039861-exon-sc0002223-1491911889:10685..11181TCONS_00039861-exon-sc0002223-1491911889:10685..11181Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:10685..11181TCONS_00039861-exon-sc0002223-1510915933:10685..11181Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:10685..11181TCONS_00039861-exon-sc0002223-1575043694:10685..11181Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:11646..11751TCONS_00039861-exon-sc0002223-1491911889:11646..11751Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:11646..11751TCONS_00039861-exon-sc0002223-1510915933:11646..11751Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:11646..11751TCONS_00039861-exon-sc0002223-1575043694:11646..11751Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:12303..12523TCONS_00039861-exon-sc0002223-1491911889:12303..12523Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:12303..12523TCONS_00039861-exon-sc0002223-1510915933:12303..12523Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:12303..12523TCONS_00039861-exon-sc0002223-1575043694:12303..12523Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:12742..12873TCONS_00039861-exon-sc0002223-1491911889:12742..12873Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:12742..12873TCONS_00039861-exon-sc0002223-1510915933:12742..12873Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:12742..12873TCONS_00039861-exon-sc0002223-1575043694:12742..12873Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:13214..13378TCONS_00039861-exon-sc0002223-1491911889:13214..13378Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:13214..13378TCONS_00039861-exon-sc0002223-1510915933:13214..13378Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:13214..13378TCONS_00039861-exon-sc0002223-1575043694:13214..13378Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:13635..13771TCONS_00039861-exon-sc0002223-1491911889:13635..13771Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:13635..13771TCONS_00039861-exon-sc0002223-1510915933:13635..13771Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:13635..13771TCONS_00039861-exon-sc0002223-1575043694:13635..13771Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:14383..14494TCONS_00039861-exon-sc0002223-1491911889:14383..14494Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:14383..14494TCONS_00039861-exon-sc0002223-1510915933:14383..14494Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:14383..14494TCONS_00039861-exon-sc0002223-1575043694:14383..14494Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:14645..14728TCONS_00039861-exon-sc0002223-1491911889:14645..14728Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:14645..14728TCONS_00039861-exon-sc0002223-1510915933:14645..14728Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:14645..14728TCONS_00039861-exon-sc0002223-1575043694:14645..14728Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:15142..15322TCONS_00039861-exon-sc0002223-1491911889:15142..15322Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:15142..15322TCONS_00039861-exon-sc0002223-1510915933:15142..15322Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:15142..15322TCONS_00039861-exon-sc0002223-1575043694:15142..15322Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:15459..15548TCONS_00039861-exon-sc0002223-1491911889:15459..15548Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:15459..15548TCONS_00039861-exon-sc0002223-1510915933:15459..15548Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:15459..15548TCONS_00039861-exon-sc0002223-1575043694:15459..15548Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:15839..15925TCONS_00039861-exon-sc0002223-1491911889:15839..15925Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:15839..15925TCONS_00039861-exon-sc0002223-1510915933:15839..15925Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:15839..15925TCONS_00039861-exon-sc0002223-1575043694:15839..15925Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:16604..16724TCONS_00039861-exon-sc0002223-1491911889:16604..16724Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:16604..16724TCONS_00039861-exon-sc0002223-1510915933:16604..16724Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:16604..16724TCONS_00039861-exon-sc0002223-1575043694:16604..16724Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:17296..17483TCONS_00039861-exon-sc0002223-1491911889:17296..17483Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:17296..17483TCONS_00039861-exon-sc0002223-1510915933:17296..17483Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:17296..17483TCONS_00039861-exon-sc0002223-1575043694:17296..17483Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:17686..17870TCONS_00039861-exon-sc0002223-1491911889:17686..17870Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:17686..17870TCONS_00039861-exon-sc0002223-1510915933:17686..17870Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:17686..17870TCONS_00039861-exon-sc0002223-1575043694:17686..17870Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1491911889:18083..19373TCONS_00039861-exon-sc0002223-1491911889:18083..19373Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1510915933:18083..19373TCONS_00039861-exon-sc0002223-1510915933:18083..19373Clytia hemisphaericaexon
TCONS_00039861-exon-sc0002223-1575043694:18083..19373TCONS_00039861-exon-sc0002223-1575043694:18083..19373Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002223supercontigsc0002223:10685..19373 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.750393	1.13136	1.88923	4.12722	1.50997	1.99853	2.09788	1.08447	0.499846	1.23244	0	0.093415	0	0	0	0.164453	0	0	0	0	1.12686	3.80893	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039861 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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