TCONS_00039864 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039864
Unique NameTCONS_00039864
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3843

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039864 ID=TCONS_00039864|Name=TCONS_00039864|organism=Clytia hemisphaerica|type=transcript|length=3843bp
CTGGAACACAAAGAACATTCAGAAAGAAAGTTGTCAAAGTTAAAAGCACA
AAAATAAGAAATGGTAGAAAAAGGACTACTTATGTCCAACCTTTCATGAG
CAGTTCATCTCAATCAAAGTACTTGAAAAATGAGTCTTTCAGTCCTTGTA
TATCTGGGGATGAGGATGAGAGCTCAAAAGAGGATAACTTTGTCACTGAT
TCAGTAAACAAAACAAACGATGATTCAAAAAGGTCAAAGTACCAGACAAT
GAAGGAAAAGGAGCTTGGGGCATGGGATACCTTCTCACCTGAAGTGATAA
GGAAGTACGCAGAGAAGTTCGATGAAATGCTACCCACAATATGTGTTATC
TGTGAAACAAAATTACTTGAAAATTGTGTATGGTGCAAAACATGTGGGCC
AAGAACCACATATTGCAGTGGATGTGCTGTTAAGATCCATAAGCACATGC
CTTTTCATTGTCTGTATGAAATAAATGATGATGGGTTTCACgaatttcaa
gtcaattatGAGCTGAAAAGCAAACATACAAGCCAATGTCTGTATGCCAA
GCCTAGATTATTGACAGTAATTTCAGAAACAGGACTACATCATCAGTGCT
CTATCTATTTTTGTGAATGTGAAAGTGATTTGGAAACACTACTTCGTCTT
GACTTGTGGCCTGTGACTCCAATCAAACCAAATACGGTGGTGTCTATAGA
TCTCCTACACCTTTTCATCTCGTTGCAGTTGGAGGGGAAGAtatcttttc
attctttttgtgaTGGTCTAGCGTGGAAAAAAGGAATGGGAAACACTGTC
TTGagaaGATATCTAAATCGTTTGGAGAAGACTGACACTATCGATCAGTT
TAGGAACTTTCGGAGGCAACTTCTTAACCTCAGAAGCATTTGTGAAGACT
TCACTGGACTAGAAGAGTGTGCTGCTTGTCCCAAAGAAGACGGCAGTGTG
TTCTATTGTTTAGATGCAAACTTTGGTCTAGTACTCAAAGCGTCTGCTTC
CAAATCAAAGAAACTTGCGATGCGATCTTCCAATTTATTTGTTCCTGATG
AAGATATCGATTCATTCATGGTGAACTATGATGATGCTTTAAAAACAAAG
GATTGCAGTAACTTCCAAGCCGGAAACAATCTTCGatcgaaaagaaaaac
aaagaaattaagTGTTACCGGAATTTTCGGAATGTCTTGTAGACACGAAT
TTCCAAAACTCTTCCTAAATATGAGGCATGGTGAAAGgctGGGATATGCT
GTGTATTTACTTGACCGTTTGTTGGAAGAAAATCATGACAAAAGTTTACT
CACTCACGTTATATATGACATAGCCTGTGTATTAAAATCGCATTTGAAGa
aaaagaacacGTTTACGAAGTACAAAGATTTCCACTTTGGAATACCAGTT
TTTCACTCATATGGTCACAGAGGGGATTGTCAGGTAAAGAATTCCATTCG
TCGGCTTGAAACGTTTGGTTTGATGGATGGAGAACTGATGGAGCGCCTGT
GGTCTTACCTGAGGTCGTTTTCAAAGATAACCAAAGAAATGACTCCGGCG
CATCGAACTGACTTACTCAGTGATGCCTTGATGCACTTTGGCTCAAAGAA
AATGGGAAACATAGGGAAATATCTTGTATTTTTGCGTAACAAGGCGATCG
AAACCGTGAATTCCTGTGAGTCGGAGATTAAAGCGATATGCTCTAAACTG
ACTGGTAATGGTTCCTTTCATTGTCATTCAGATCGTGTCTACAATCCATT
ATGAAGTTAAAGTGGATGAGAAAGTCATTGAAGCTTGGAAACGAGAGGAA
GACAGTGTTGTAAACAAGGACAAAAGGCCACTGCAACCAGATATACAACC
GATCTGTATTTTGAGGACATCTAGGCAACTATTGACAAAAGCATTGACGG
TACTCTACTGACGGACACGACAAATAATATTCTAGGACAAATCTTCAAAC
GTTCAGCCAATTTGAAAACAATGACAGTACTCCTTTGACATTGacgaata
aataaaataataacgTAGCGTTAGAATTTTGTAGCATTTTACTTCTTTAT
AATTAGAGatgcTGCCGACTGGAGACAAATTTATTACGAAAAGCTTAAAA
CCTTCAACAGGGAATCTTCTTTAGCACTGATGAGTGAAAAAGTATCTGAT
GTTGCCTTACATCAACGAAAAGCAAAACGCATCGAATCAAGTTTAAATAC
ATTTGAAAAAGAGCATATGATTGCTAAACGATGGCTTCCAGCTTCTCAAG
AATTTAGACTTCAACATATGAAATATCTAaagcaaaaatcaaaagaaacc
atCTCAACTTTGTATAGCCGATGCTCTGAGAGAATGATGCTTTTAGTACT
GAAGAGACGATATGCAGATGGATCGGCCATTGCCACAAGACTATCCAAAC
AGATCAACAGAGTTTGCAAGGAAATAAAGGATTTGACGGCTTCTTTCAAC
AACATTAATACTGAAATATCACTGGATTTTAAGACCGTTAGCTACATAGA
AGTATTAGACGTTAAGTCCCCCATCTATAATGATACCActctttttttca
aaGTAAAATGTTCTTCAGTTCCATACACGGTCATCAAATCTCTTGTTCAA
TATCATATGCGGAAACAACGAGCACAAGAAGAAATATCGCTTGTTGAGCG
TGAGATGGAAGTCACAGTCTCTTATTGGGAAAAACAACTTTGTTTGCTTA
CTGCCTGTTTGGGGCGTCAAACTTTAAAAGGCATCAAATATTTGCTAACC
GAAAGAATACGTGCCATTGAACTTTTCATTTATGAGTtgaaaaagtcttt
ttcaacTGTCGTAGCTAACCCTTCATTTGACATCAAGAATAACCAAGTTT
CCCATGAAATGCCAGATGAGGATGAATATTTCAGTGACTTTTCTGATTCA
AGCTATTCAGGAATTGATAGTGAAGAGAATGAGGAAGTTgacctttattt
ttgaaattatataagATACAACAATCACGATACGGTTTCGGTTTAAAGAA
TCTCGAAGATTTTTACGTGCTTGAAATTTTTAGCTGCACTTGATCCACCT
GCTTTtcctcaaaaaaaaatcataaaattcgatttttgagattttcgtCA
CGGATCCTAACGAATATTTTAATCAGATTCATTTTCGCGAGTTTGAACTT
CATTcttaataagcagatattcaataggtaaaagttggttattgagattt
attaacccgaggtgatgaaTATTCAACGAGTTGAATAtcatcaccgaggg
ttaataaatccaataaccaacgtaaaacctattgaatatacgTTTTATTC
TATAACTAAaggcaaaaacaaaagaaaaacttgaaacattttttggagtc
ccattttttacaaaataaaaagtgCTCACAAAATCGCATGttcgaaattt
ttctttttatcaactttttaattactttaagtgaaattgacaatagaact
attttaaaagttttttctaGCAAGAGTAAACatgcaaaaatccaaaaaaa
aaattgaatgaaaaaattgcCATGTGATAATATAGCCATGGAGCCATGTG
ATATCGTTAATTATCAAACGGcagtttttgcctacaggtatagaATAGTA
TTTGTTATTATTTAttaaaccttcaactactcaaaaatGTATAGATAGAT
GatatattttattatatataaCTAAACGTTTTTATGGACTTAGGCAAACT
CTTAAATTTTATTGCAAACTTGTTTTCCAAAGTTGAGATTTTCCAATTCA
AAGCGTAAATTTCTAGTTTTTCATGGTCCCTTTccttttttactaaaaaa
tttacattagAATATCTCAACTAACTTTGAAaggtcaattttc
Run BLAST on NCBI

transcript from alignment at sc0002223:10706..19373+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039864 ID=TCONS_00039864|Name=TCONS_00039864|organism=Clytia hemisphaerica|type=transcript|length=8668bp|location=Sequence derived from alignment at sc0002223:10706..19373+ (Clytia hemisphaerica)
CTGGAACACAAAGAACATTCAGAAAGAAAGTTGTCAAAGTTAAAAGCACA AAAATAAGAAATGGTAGAAAAAGGACTACTTATGTCCAACCTTTCATGAG CAGTTCATCTCAATCAAAGTACTTGAAAAATGAGTCTTTCAGTCCTTGTA TATCTGGGGATGAGGATGAGAGCTCAAAAGAGGATAACTTTGTCACTGAT TCAGTAAACAAAACAAACGATGATTCAAAAAGGTCAAAGTACCAGACAAT GAAGGAAAAGGAGCTTGGGGCATGGGATACCTTCTCACCTGAAGTGATAA GGAAGTACGCAGAGAAGTTCGATGAAATGCTACCCACAATATGTGTTATC TGTGAAACAAAATTACTTGAAAATTGTGTATGGTGCAAAACATGTGGGCC AAGAACCACATATTGCAGTGGATGTGCTGTTAAGATCCATAAGCACATGC CTTTTCATTGTCTGTATGAAATAAATGTAAGTATTCTAATCCTAGAGTAA CTGGTAATAGGGTATACTCTTGGGTCTCAAATGAAATAAACATACAGGta catttaaaataaattaagaTTATTTTTGAGGTCTTTATGATAACCCAact tgattctttttttgtgaAGCTGGACCCTTGCCTGATTACATATTGAGATA ATTTTTTGCTCAGGGCTGAAGTGGTCAAAGGGATTTCATATTTTGATACC AACGGATGGATTTCTGTTTCAGGGCTGGAGCCTTAGCAGCTTAGGTTGCT TATGAAAGTAATGTATAGAAAAAGCGTTCTCTTCTAGAAAGCATGGAATG TACAGGAAAGTAGTTGCAGATTTCTTTCCTGTCATTTGCGCTAGATTCAG GGTTTAGTGGTCTTTTGAAGAAGTGACAATAATCAGACTGGccatcaaaa aacttttgatttatATAATTTCTTCCTAATCTATTTGAAGGATGATGGGT TTCACgaatttcaagtcaattatGAGCTGAAAAGCAAACATACAAGCCAA TGTCTGTATGCCAAGCCTAGATTATTGACAGTAATTTCAGAAACAGGTAT TAAAAATCCTTTACATGTCATTACTTTAAAGGATCACATGGTGTCATGCA AGTTTTTTGGGTCCCCCATCCGGTGTTGAAAACCCCCATCTGGCTTTCCT TCCCCATTACTGTTTGATTTCTGGTCTCTCGATCTGAAAATTACTTATAT AAAGTTGTTGGTTCACATCAAAATGAATTATAAATGATAAATTCATGCAA AAACATTATacaaaaaaagatattcatgTAATCAATAAGTAAGATTGATA CCTTTCTTTGATGTTTaccttggaaaaaaaattcatccccTCCCAGACCA ACAATGTGATATTAATTTATTCTCTGATAAAAACAGGCTACCTGATAATC TAATTAAATTGTTCATGCAAATAtccttttgaaagttttaaaactttGGG TCTATGGTTCTTTTTTTAAACGTTATGATTTTTCATAGTTACAGAATTTC AGCATTATGTTCTATAAGACATAGATACAAATAGGGGGGAAAGATAAAAT ctatatatttgaataattttttttcaaaattacgtCATCTTTTCTAGGAC TACATCATCAGTGCTCTATCTATTTTTGTGAATGTGAAAGTGATTTGGAA ACACTACTTCGTCTTGACTTGTGGCCTGTGACTCCAATCAAACCAAATAC GGTGGTGTCTATAGATCTCCTACACCTTTTCATCTCGTTGCAGTTGGAGG GGAAGAtatcttttcattctttttgtgaTGGTCTAGCGTGGAAAAAAGGA ATGGGAAACACTGTCTTGGTAAATATTTTCATGATAAACTAGTATTAGTt gcccttcgtggaaacaattttTTAGGTGTCTAAAGGATACTGAATATTCG GAGCATGCCACTTAAAAtatatgttattattattactttgcttgatttat tttttaataaatagGCTCTTACACTCGTTGAGATATTTTCAATTATTCTT GTTTTCTGGCGCttgagtttttatttttatttttagagaaGATATCTAAA TCGTTTGGAGAAGACTGACACTATCGATCAGTTTAGGAACTTTCGGAGGC AACTTCTTAACCTCAGAAGCATTTGTGAAGACTTCACTGGACTAGAAGAG TGTGCTGCTTGTCCCAAAGTAAGAATTACTTTTACACATGCTTTGATCAG AGTGGAACCACTAAGGTGCATAACATTGTTGACACTAAGGAACACATTTT AATAAGCAAACCTATTATTTTCTGGCTCATTGCTAAGGTCGCTAAGATTT TTGTCAAACTCAAGGTTGCAGTTGTTGCTCAATAGGCCACTAAGGTTTTC TCTTGTTCATGTTGTGAACATCTGTTGTTGAAGAAGAAGTTGCTTTGCTT ATCAAAGGCTCAGAGTACAGCAAATTTATGAGCAAGGCCAACCTTAGCAA CTAGCTTGCTTTAAGTAAAATAATGTGTATTAAAGAAGGAATATCAACTT TCGTTTAGGAAGACGGCAGTGTGTTCTATTGTTTAGATGCAAACTTTGGT CTAGTACTCAAAGCGTCTGCTTCCAAATCAAAGAAACTTGCGATGCGATC TTCCAATTTATTTGTTCCTGATGAAGATATCGATTCATTCATGGTGAACT ATGATGATGCTTTAAAAACAAAGGTGAgatttttattctattttaaaaAG CAGCGATGCCTAAACATATTTTAATTTATTAAATTCTCTAGGAGTgacct ttaaaatttttcaaaatcaaatcaaagcaATCTTAATCTAAGAAGCTGTg aaattaatattttgaccTATAAAAATTGAGATGCTATGAGTCCTCATGAG TCCTTATATGTTCTGATATACTGTGTTACAAAATATTATAATTGAAAGTC ATTGTAGTTCTTTAGGAACTTCTTACTAGGATTGCAGTAACTTCCAAGCC GGAAACAATCTTCGatcgaaaagaaaaacaaagaaattaagTGTTACCGG AATTTTCGGAATGTCTTGTAGACACGAATTTCCAAAACTCTTCCTAAATA TGAGGCATGGTGAAAGGTATTAAAATGAGTTGAATTTTATCCCCAACAAT TAAATTGAATCTCAAGGAGAATAGAATCAAATACAATTTTaatgaagttt gaaaaaagaatttctttccAAGATCTTCAGATCCATTTTAAGCGCTTGAA TCTTGGCAACTTGGTTacttataaaaataacgtgTAGTATAATTCCTTAG AAATGAATATTTGTGGGAAGATATTTTCCCGAAAGCAATCTTTGTGGAAC TGCTCTGAAATCATAAATCGATCCTAAATCTGGTCTTTCTTGGACAAAGT TCATctgcaaaattttggcaaaaataaatTAACGAAATTTAAGCCAGGGT GAGCTCATTTTCCATATGCTACTCTTTGGTGCTTAATTTTAGGGGACAAT AGAATAAGCGGGACGGGTGGGTACTCGagaataaaatcaacaaaatcggG GAGGGGTCATAATGTGTCTGATTGGGGCCTGATTGTGCTGAAGATTCCTT GGAATCTTGGAAAATGAAGCTTTTAACCCTTTTTTGGTACTTCGTAGgat aaaagtcataaaatgggAGGTCATTATTAATGATATCGGGGTTGAAAAAT TATTGTAcatcatataaaaattttcaggctGGGATATGCTGTGTATTTAC TTGACCGTTTGTTGGAAGAAAATCATGACAAAAGTTTACTCACTCACGTT ATATATGACATAGCCTGTGTATTAAAATCGCATTTGAAGGTATGTACACT TACTGTATTCTTATTTCCAATGTCATTCTCAAAGATTATAGCGACGCCGG GTACCTGCTAGTATTAGCGATGTTTTGCTCTTCATCTATGACTAATGTTC ACAAGCAAACCACATTAGACGTTCTttgcttttttaaagaaaaagaacac GTTTACGAAGTACAAAGATTTCCACTTTGGAATACCAGTTTTTCACTCAT ATGGTCACAGAGGGGATTGTCAGgtaataatttttcttctccgCCATTAT GATGAATGTATCTTCGTCATCCTGGAGTGGCAATAAACAAAATTGAAGCA CGCTTTGATGATGCCCTTATTATCACCCTCCGTTACACTAGAAAATATCA GTAATACACTCTTCttgagatgcataaatttattgttgtcctcgttttca aacagatttcattgttataaaattacatattcacaatgataattgtgttg tttacacctcatgagacattttgaatttcaagtacTTTTGTTTTAGAGtt aatgtttgccttttgggaatttaaattggtttaaatgtataatttcgtag caatgaaatctgtttgaaaacgaggacaacaataaatttatgcatctcga gaagagtgtattcccTGAACTTTATTGTTTATCCAGGTAAAGAATTCCAT TCGTCGGCTTGAAACGTTTGGTTTGATGGATGGAGAACTGATGGAGCGCC TGTGGTCTTACCTGAGGTCGTTTTCAAAGATAACCAAAGAAATGACTCCG GCGCATCGAACTGACTTACTCAGTGATGCCTTGATGCACTTTGGCTCAAA GAAAATGGGAAACATAGGCAAGTACTTTAAGAAACATTCGAGATCCATCT TATAAATTCTTTGACTTGTGACGTTTTATTTAGACTAAAACACAAGCAta ctatttttcaatttttttatttttcgtatAAGCTTGCACAATTTTTGCTT TAGGGAAATATCTTGTATTTTTGCGTAACAAGGCGATCGAAACCGTGAAT TCCTGTGAGTCGGAGATTAAAGCGATATGCTCTAAACTGACTGGTAATGG TTCCTTTCATTGTCATTCAGATCGTGTCTACAATCCATTATGGTATAAAT AAGTATTTTGATTCCCTACTGTTTATTTACTAGTTGTAGGAAAACTATAA TTATTATACCTTTATCTGCGGGAGAAAACTCGTTCGTCAGTTCTTGAAAT TCAATCACATGAAAGTCTCTCCCCTCTAGGTAAATCGTAATGATCCCTAT CATAAAAAGGAAATAAAGAGTATTGTATTCagtgaaataaaaaagctact ACTTAGCAATTCATCAATCTCATTCCGTTGTAGAAGTTAAAGTGGATGAG AAAGTCATTGAAGCTTGGAAACGAGAGGAAGACAGTGTTGTAAACAAGGA CAAAAGGCCACTGCAACCAGGTCATTACTGCTTCTACCACAGCACTTTTC TTGGACTACTTAATCTATTTACTTACTTTAATTTATCTTAATTTGCTTGA GCGCTTTACGTTGTAACAGAACTTAAAGAATAATGATTTTAGGCTTTTAG AACcattttttgtattatttttcaGATATACAACCGATCTGTATTTTGAG GACATCTAGGCAACTATTGACAAAAGCATTGACGGTACTCTACTGACGGA CACGACAAATAATATTCTAGGACAAATCTTCAAACGTTCAGCCAATTTGA AAACAATGACAGTACTCCTTTGACATTGacgaataaataaaataataacg TAGCGTTAGAATTTTGTAGCATTTTACTTCTTTATAATTAGAGGTAAGCT TATAATTCAGCTACGTGTTATAGGCATTGGGTTTAAAGTCCCGAAGGGGC TAGACGTGAAACACCTGGATGGGACATTTCCTAGCTATTTAATCTTTATC TTTATCCAGAACACCTGCGtatggtttttacacaaatgccgGATTGAAAT TAAATCTATCactagatttcgaaaaatatagtacttgaaaacaaagaatt aaGTGGTTTCACTTTTCTTGCCTGTAAACAAAagtttctactctagccct tcgggctttaaacttaaTGGTAATAGCAATGtgcgtttttctttttagat gcTGCCGACTGGAGACAAATTTATTACGAAAAGCTTAAAACCTTCAACAG GGAATCTTCTTTAGCACTGATGAGTGAAAAAGTATCTGATGTTGCCTTAC ATCAACGAAAAGCAAAACGGTAATTTAGGTTTTAAGAGTTACCATTATCC ATGCTttttaaaattacttttttattttgttacacATTTTAAATCAAGAA CAAACGTTTAGTAACTATGACGGACCGATTACCCTTAAAAGTATATTCAA ATCTAAGGTATCGAGCCCTTTATTCATGTGAATAGCGTACCGCGgtaaat ctaaaaatagacttTATTTTTGCCATGATCATTACTTTCCATATGTTTGT ATGAgtagttccaatcccatcaacgtTTGCGTTAATTTCTTTTgtacgtt aattgcatcctatGACAAAAGATATNCTTTCCATATGTTTGTATGAgtag ttccaatcccatcaacgtTTGCGTTAATTTCTTTTgtacgttaattgcat cctatGACAAAAGATATGTAGCAACGTGCACGTTTTTTAAATTGAGACGA ATTGGATTGTGGAATTGCAATTTGTACAAAAATAATGGAAACTGAAAAGT TTAAAACACGCATAACATCTTTCTCCCTTTCCCTATGAAactgtttggta aatttttgtttggCTGAAAATTATATATTTCTTTCATTAGCATCGAATCA AGTTTAAATACATTTGAAAAAGAGCATATGATTGCTAAACGATGGCTTCC AGCTTCTCAAGAATTTAGACTTCAACATATGAAATATCTAaagcaaaaat caaaagaaaccatCTCAACTTTGTATAGCCGATGCTCTGAGAGAATGATG CTTTTAGTACTGAAGAGACGATATGCAGGTGCATACatacattcttttat ttttacaggCAGTGTTGAATTCAATTTGTACTTGTACTTGgtaattttgg tcggggaagaTTGATCAAAATGTCACTGACTAAAATTTCCCTCCGACTTA TTTTCCCCCGAAGGTATACGATAACGATATCAAccagtttgtttactttt tattttaaaatcgtACATAATTTTTCATAGATGGATCGGCCATTGCCACA AGACTATCCAAACAGATCAACAGAGTTTGCAAGGAAATAAAGGATTTGAC GGCTTCTTTCAACAACATTAATACTGAAATATCACTGGATTTTAAGACCG TTAGCTACATAGAAGTATTAGACGTTAAGTCCCCCATCTATAATGATACC ActctttttttcaaagtaagTGTCTactttgattttacttttgattttgt tttagaaTTGAATTGGAATTTGTTTCGTGGAGTACTATTTCACAAATGAA GAAATCTTTTGTTCAATATTAGACCAAATTTGCCCTGAAATGGCCAAATT TAAGTACATATTGACCATAATTTTGACGTAAATAAAAGTTTCATTTGATG TGTTTAAAAATCTTATATCTTACTTAGGTAAAATGTTCTTCAGTTCCATA CACGGTCATCAAATCTCTTGTTCAATATCATATGCGGAAACAACGAGCAC AAGAAGAAATATCGCTTGTTGAGCGTGAGATGGAAGTCACAGTCTCTTAT TGGGAAAAACAACTTTGTTTGCTTACTGCCTGTTTGGGGCGTCAAACTTT AAAAGGCATCAAATATTTGCTAACCGAAAGAATACGTGCCATTGAACTTT TCATTTATGAGTtgaaaaagtctttttcaacTGTCGTAGCTAACCCTTCA TTTGACATCAAGAATAACCAAGTTTCCCATGAAATGCCAGATGAGGATGA ATATTTCAGTGACTTTTCTGATTCAAGCTATTCAGGAATTGATAGTGAAG AGAATGAGGAAGTTgacctttatttttgaaattatataagATACAACAAT CACGATACGGTTTCGGTTTAAAGAATCTCGAAGATTTTTACGTGCTTGAA ATTTTTAGCTGCACTTGATCCACCTGCTTTtcctcaaaaaaaaatcataa aattcgatttttgagattttcgtCACGGATCCTAACGAATATTTTAATCA GATTCATTTTCGCGAGTTTGAACTTCATTcttaataagcagatattcaat aggtaaaagttggttattgagatttattaacccgaggtgatgaaTATTCA ACGAGTTGAATAtcatcaccgagggttaataaatccaataaccaacgtaa aacctattgaatatacgTTTTATTCTATAACTAAaggcaaaaacaaaaga aaaacttgaaacattttttggagtcccattttttacaaaataaaaagtgC TCACAAAATCGCATGttcgaaatttttctttttatcaactttttaattac tttaagtgaaattgacaatagaactattttaaaagttttttctaGCAAGA GTAAACatgcaaaaatccaaaaaaaaaattgaatgaaaaaattgcCATGT GATAATATAGCCATGGAGCCATGTGATATCGTTAATTATCAAACGGcagt ttttgcctacaggtatagaATAGTATTTGTTATTATTTAttaaaccttca actactcaaaaatGTATAGATAGATGatatattttattatatataaCTAA ACGTTTTTATGGACTTAGGCAAACTCTTAAATTTTATTGCAAACTTGTTT TCCAAAGTTGAGATTTTCCAATTCAAAGCGTAAATTTCTAGTTTTTCATG GTCCCTTTccttttttactaaaaaatttacattagAATATCTCAACTAAC TTTGAAaggtcaattttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024125XLOC_024125Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039864-exon-sc0002223-1491911889:10706..11181TCONS_00039864-exon-sc0002223-1491911889:10706..11181Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:10706..11181TCONS_00039864-exon-sc0002223-1510915933:10706..11181Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:10706..11181TCONS_00039864-exon-sc0002223-1575043694:10706..11181Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:11646..11751TCONS_00039864-exon-sc0002223-1491911889:11646..11751Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:11646..11751TCONS_00039864-exon-sc0002223-1510915933:11646..11751Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:11646..11751TCONS_00039864-exon-sc0002223-1575043694:11646..11751Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:12303..12523TCONS_00039864-exon-sc0002223-1491911889:12303..12523Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:12303..12523TCONS_00039864-exon-sc0002223-1510915933:12303..12523Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:12303..12523TCONS_00039864-exon-sc0002223-1575043694:12303..12523Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:12742..12873TCONS_00039864-exon-sc0002223-1491911889:12742..12873Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:12742..12873TCONS_00039864-exon-sc0002223-1510915933:12742..12873Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:12742..12873TCONS_00039864-exon-sc0002223-1575043694:12742..12873Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:13214..13378TCONS_00039864-exon-sc0002223-1491911889:13214..13378Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:13214..13378TCONS_00039864-exon-sc0002223-1510915933:13214..13378Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:13214..13378TCONS_00039864-exon-sc0002223-1575043694:13214..13378Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:13635..13771TCONS_00039864-exon-sc0002223-1491911889:13635..13771Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:13635..13771TCONS_00039864-exon-sc0002223-1510915933:13635..13771Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:13635..13771TCONS_00039864-exon-sc0002223-1575043694:13635..13771Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:14383..14494TCONS_00039864-exon-sc0002223-1491911889:14383..14494Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:14383..14494TCONS_00039864-exon-sc0002223-1510915933:14383..14494Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:14383..14494TCONS_00039864-exon-sc0002223-1575043694:14383..14494Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:14645..14728TCONS_00039864-exon-sc0002223-1491911889:14645..14728Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:14645..14728TCONS_00039864-exon-sc0002223-1510915933:14645..14728Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:14645..14728TCONS_00039864-exon-sc0002223-1575043694:14645..14728Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:15142..15322TCONS_00039864-exon-sc0002223-1491911889:15142..15322Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:15142..15322TCONS_00039864-exon-sc0002223-1510915933:15142..15322Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:15142..15322TCONS_00039864-exon-sc0002223-1575043694:15142..15322Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:15459..15597TCONS_00039864-exon-sc0002223-1491911889:15459..15597Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:15459..15597TCONS_00039864-exon-sc0002223-1510915933:15459..15597Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:15459..15597TCONS_00039864-exon-sc0002223-1575043694:15459..15597Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:15839..15925TCONS_00039864-exon-sc0002223-1491911889:15839..15925Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:15839..15925TCONS_00039864-exon-sc0002223-1510915933:15839..15925Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:15839..15925TCONS_00039864-exon-sc0002223-1575043694:15839..15925Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:16081..16298TCONS_00039864-exon-sc0002223-1491911889:16081..16298Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:16081..16298TCONS_00039864-exon-sc0002223-1510915933:16081..16298Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:16081..16298TCONS_00039864-exon-sc0002223-1575043694:16081..16298Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:16604..16724TCONS_00039864-exon-sc0002223-1491911889:16604..16724Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:16604..16724TCONS_00039864-exon-sc0002223-1510915933:16604..16724Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:16604..16724TCONS_00039864-exon-sc0002223-1575043694:16604..16724Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:17296..17483TCONS_00039864-exon-sc0002223-1491911889:17296..17483Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:17296..17483TCONS_00039864-exon-sc0002223-1510915933:17296..17483Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:17296..17483TCONS_00039864-exon-sc0002223-1575043694:17296..17483Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:17686..17870TCONS_00039864-exon-sc0002223-1491911889:17686..17870Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:17686..17870TCONS_00039864-exon-sc0002223-1510915933:17686..17870Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:17686..17870TCONS_00039864-exon-sc0002223-1575043694:17686..17870Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1491911889:18083..19373TCONS_00039864-exon-sc0002223-1491911889:18083..19373Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1510915933:18083..19373TCONS_00039864-exon-sc0002223-1510915933:18083..19373Clytia hemisphaericaexon
TCONS_00039864-exon-sc0002223-1575043694:18083..19373TCONS_00039864-exon-sc0002223-1575043694:18083..19373Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002223supercontigsc0002223:10706..19373 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 2.69707 3.31046 3.11176 2.71856 3.12272 1.17009 1.04728 2.1073 0.251019 0.653062 0.0554403 0 0 0.262938 0 0 0 0.00165943 0.0671756 0 0.135675 0.628892 0.120533 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039864 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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