XLOC_022805 (gene) - C. hemisphaerica

Overview
NameXLOC_022805
Unique NameXLOC_022805
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001788:35247..40478+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022805 ID=XLOC_022805|Name=XLOC_022805|organism=Clytia hemisphaerica|type=gene|length=5232bp|location=Sequence derived from alignment at sc0001788:35247..40478+ (Clytia hemisphaerica)
atgtacTGAAGAGTGAGGAATTACAGAAGGACCAAGAGTCATTGCAAAGC GAAAAATTACATAATGATGATAAATCACAGAAGaaagaattatcaaaaga aGGAAACTCACAAAGAGACGAAAAATTACTAAATGCCAAGGAATCACCAA AACGCGGAGAGTCtcgaaaagacaaaaaattgcaaCATAGCCAGGAATCA CCGAAAAACGAAGGATccttgaaagaagaaaaattacaacaTGACGAGGA GTCGCCGAAAGAAGAATTACCAAAAGACGAAGAATCCCTGAAAGACGATA AATCCTTGAAAGACAAACAATTAAGAACAAACAAAAAGCCACTTGAACAG AAGGATTTACAGAAGACCGATGGATCACCAAAGGATGACAAATTACAGAA GGACGAAAAACTACCcaatgaagaaaaatttcaaaaggtcGAACACAAGC AAGAACTGGTAGAAGATAGTGATGATGACAGGGATGAAATGTTTGTACTG GACAAGTCTGACGTGTGGAGTAATAGTAAGTATCAAAGCTCTGTTTAAAA AAGCGATATTAGAgttaaaaagttacaaatttttgaaattctttaatggT AGTTGGGAGTCAGTAGTATCTTTAGCGTAATTAAGAAACGTTTTTTACCA ACATTCCTATGACTAGCTGGCTGTATCATTTGAGGCGTGCGATAGTATgc gcacacctccacacacCTGAAATGTCTTAGGAGTGCGATTTATTGCAAGC CATAAAATTAGTTTTACAACTCAAAGTTGAGCATAGCACTCCTAATCGCA AGATGGATTCACTTGTTATCATGTGATTATATATACTAATCAGTAATCAC ACAtctaaattactaaaattaaggttttagGAGTGTTTTTTTGTACTCTG TACTAAAAGATAGCCGTTATGAACAATCTCGTTTCATAACGATTTTCCAG TGCATAAAGACGATGAACCACCTAAAGAAGAATTACCAAAAGACGAAGAA TCTCTGAAAGACGATAAATCCTTGAAAGACAAACAATTACGAAAGAACGA AAAGCCACTCGAACAGAAAGATTTACAGAAGACCGATGGATCACCAAAGG ACGACAAATTACAGAAGGATGAAAAATTACCCAATGAAGAAGAATTTCGA AAGGTCGAACACAAGCAAGAACTGATAGAAAATAGTGATGCTGACAGTGA TGAAATGTTTGTTCTGGACAAGTCTGACGTGTGGAGTAATAGTAAGTATT GAAGCTCTGTTTAAAATAGCGATATTAGAgttaaaaagttacaaaatttt gaaattctttcccTAATGATAGTCGGGAGTCAGAAGTTCCTTTAGCCTAA TTAAGAAACGTCTTTTACCAACATTCCTTTGGCTAGACattttttgtact ttgtacTAATAGTTGGCCGTAATAAACAATCTTGTTTTATAATGATTTTC CAGTACATAAAGACGATGAATCACCGAAAAAAGAATTACCAAAAGACAAA GAATCTCTGAAAGACGATAAATCCTCGGAAGACAAACAATTAAGAAAGAA CGAAAAGCCACTCGAACAGAAAGATTTACAGAAGACCGATGGATCACCAA AGGACAACAAATTCCAGAACAACGAAAAACTACCcaatgaagaaaatttt cgCAATGTCAAACACAAGCAAGAACTGACAGAAAATAGTGATGCTGACAG TGATGAATTATTTGTACTGGACAAGGCTGATGTGTGGAGTAATAGTAAGT ATCAAAACTCTGTTTAAATTAGCGATATTAGAgttaaaaagttacaaatt tttgaaattctttctcTAGGTAGTCAGGGGTCAGTAGTTCCTTTAGCCTA ATTAAGAAACGTCTTTTACCAACATTCCTATGACTAGACATTTTTAGTAC TCTGTTTTTCCAGAGACAAATAACTGTTATAAATACCGATTTTTGCCGTT TCACCAGGTTTCACACACATTATAGCTCCTCTCAGACTTATCCAGCATCC CCTGTTTCACAAAGGAGGATTTTAAAAGAAACCTCCTCTCTAAAACTTCT AANCGTTATAAATACCGATTTTTGCCGTTTCACCAGGTTTCACACACATT ATAGCTCCTCTCAGACTTATCCAGCATCCCCTGTTTTACAAAGGAGGATT TTAAAAGAAACCTCCTCTCTAAAACTTCTAACAGCTATATAATAAATTAT GTTGTTGAGATATCTTTGTTAGTTGATTTTCCAACCTCttcttgtgtttt ttttttaaccaaaccttttttttttggtcaCTTTGGTGTTTTTCGgagaa atttaatgaaaattttagcttcaaagAGAAAGTGACCTGTTATAAACCAT TTGAAAGctcccaaaaaataaaaacaagattaGAGAAATTACAGAAGGAC GAAAAACTACCcaatgaagaaaaatttcaaaaggtcGAACACAAGCAAGA ACTGGTAGAAGATAGTGATGATGACAGGGATGAAATGTTTGTACTGGACA AGTCTGACGTGTGGAGTAATAGTAAGTATCAAAGCTCTGTTTAAAAAAGC GATATTAGAgttaaaaagttacaaatttttgaaattctttaatggTAGTT GGGAGTCAGTAGTATCTTTAGCGTAATTAAGAAACGTTTTTTACCAACAT TCCTATGACTAGCTGGCTGTATCATTTGAGGCGTGCGATAGTATgcgcac acctccacacacCTGAAATGTCTTAGGAGTGCGATTTATTGCAAGCCATA AAATTAGTTTTACAACTCAAAGTTGAGCATAGCACTCCTAATCGCAAGAT GGATTCACTTGTTATCATGTGATTATATATACTAATCAGTAATCACACAt ctaaattactaaaattaaggttttagGAGTGTTTTTTTGTACTCTGTACT AAAAGATAGCCGTTATGAACAATCTCGTTTCATAACGATTTTCCAGTGCA TAAAGACGATGAACCACCTAAAGAAGAATTACCAAAAGACGAAGAATCTC TGAAAGACGATAAATCCTTGAAAGACAAACAATTACGAAAGAACGAAAAG CCACTCGAACAGAAAGATTTACAGAAGACCGATGGATCACCAAAGGACGA CAAATTACAGAAGGATGAAAAATTACCCAATGAAGAAGAATTTCGAAAGG TCGAACACAAGCAAGAACTGATAGAAAATAGTGATGCTGACAGTGATGAA ATGTTTGTTCTGGACAAGTCTGACGTGTGGAGTAATAGTAAGTATTGAAG CTCTGTTTAAAATAGCGATATTAGAGTTAAAAAGTTACAAAATTTTGAAA TTCTTTCCCTAATGATAGTCGGGAGTCAGAAGTTCCTTTAGCCTAATTAA GAAACGTCTTTTACCAACATTCCTATGGCTAGACATTTTTTGTACTTTGT ACTAATAGTTGGCCGTAATAAACAATCTTGTTTTATAATGATTTTCAAGT ACATAAAGACGATGAATCACCGAAAAAAGAATTACCAAAAGACAAAGAAT CTCTGAAAGACGATAAATCCTCGGAAGACAAACAATTAAGAAAGAACGAA AAGCCACTCGAACAGAAAGATTTACAGAAGACCGATGGATCACCAAAGGA CAACAAATTCCAGAACAACGAAAAACTACCCAATGAAGAAAAATTTCGCA ATGTCAAACACAAGCAAGAACTGACAGAAAATAGTGATGCTGACAGTGAT GAATTGTTTGTACTGGACAAGGCTGATGTGTGGAGTAATAGTAAGTATCA AAACTCTGTTTAAATTAGCGATATTAGAGTTAAAAAGTTACAAATTTTTG AAATTCTTTCTCTAGGTAGTCGGGAGTCAGTAGTTCCTTTAGCCTAATTA AGAAACGTCTTTTACCAACATTCCTATGACTAGACATTTTTAGTACTCTG TTTTTCCAGAGACAAATGGCCGTCATAAATACCAATTTTTGCCGTTTCAC CAGGTTTCACACACATTATAGCTCCTGTCAGACTTATCCAGCATCCCCAG GAGGTTTTTGAAGAGCATTTAAAGCAGGATTTTAAAAGAAACCTCCTCTC TAAAACTTCTAACAGCTATATAATAAATTATGTTGTTGAGATATCTTTGT TAGTTGATTTTCCAACCTCTTCTTATGTTTTTTTTAAAACCAAACCTTTT TCTTTGGTCACTTTGGTGTTTTTCGGAGAAATTTAATGAAAATTTTAGCT TCAAAGAGAAAGTGACCTGTTATAAACCATTCGAAAGCTCCCAAAAAATA AAAACAAGATTAGAGATGTATTGGGAGTATAGGTGGTTTCTCTACCTAAC TCCGGATACTAAGCTTCAAAGAGAGCAAAAACCAGAGAAGACAGCTGTTC CTGGCTAAAAATCACTCAGAAATCATCTATACATTACCTGTAATATATAT CTAATCTCACTGCGTTTGTTCCATTCGGCTCCAATGTCAGTCCATTTTTT CTCGAATGGACCTCCTAAACAGTTACTTAGTAGTATGCGTATTATAACAT CTCTCTTTTCTAAAGCCAAAAtgttcattaaattttgattcttgcctgag accgtcatttTTCTCCCCGGAAAACACACCAAAGTGTGAACTTTGCATAA CACAAATTGAACAGATCCCTCCACTAAGCTTTTTCTACGTTTCAGATGAT ACTGGAAATACTCGAAGATCCtcaagaaaacgaaaaaaaacgATCAGCTA CAAAGGGNTTCAGATGATACTGGAAATACTCGAAGATCCtcaagaaaacg aaaaaaaacgATCAGCTACAAAGGGATGGAATTAGAACATGATGGCCTAG AAACGTTTGGTGATCCTGACTTTATCCGTAAGCTACTTTTATTGTGTTTA ACATTGAGGAAGTATTATTAAATCATAATCATGGAGATTTATGCTGTCGT AAAAATGCATGCAAGATATAGAAcacatgaaaaatgaaacaggaaataaa atttaagaaaaattaatcGCTTGTTTTAAAACGTTTTGGCTATATCTGAA AAGTGATTTTAATTCTCAGGTACCAAATAACCGGGGCTGGGCGGACAGGC GTGTGTTTGCGGTGATGGACAAAATGTGTACTTtctcactttttcttttt ttgtaccATGGTACTAACTTGTAATTTATGTTCAAAATAGGGGGACCACC CCTTTGTACCATGGTACTAGCttttaatttaaaatcaaaagtgGTGGACA ACCCTTTTAGCATAGGACACTTTTTAGAAATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038157TCONS_00038157Clytia hemisphaericatranscript
TCONS_00038158TCONS_00038158Clytia hemisphaericatranscript
TCONS_00038159TCONS_00038159Clytia hemisphaericatranscript
TCONS_00038160TCONS_00038160Clytia hemisphaericatranscript
TCONS_00038161TCONS_00038161Clytia hemisphaericatranscript
TCONS_00038162TCONS_00038162Clytia hemisphaericatranscript
TCONS_00038163TCONS_00038163Clytia hemisphaericatranscript
TCONS_00038164TCONS_00038164Clytia hemisphaericatranscript
TCONS_00038165TCONS_00038165Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038158-proteinTCONS_00038158-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001788supercontigsc0001788:35247..40478 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LOC105373990PREDICTED: trichohyalin-like, partial Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17 0.71 0.76 0.72 8.22 7.29 7.07 6.82 3.81 6.44 4.56 3.6 3.98 2.73 1.93 2.2 2.64 2.39 1.28 2.14 1.37 1.06 0.9 1.15 12.09 14.67 2.04 1.56 1.32 1.88