TCONS_00038158 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038158
Unique NameTCONS_00038158
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1626

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038158 ID=TCONS_00038158|Name=TCONS_00038158|organism=Clytia hemisphaerica|type=transcript|length=1626bp
atgtacTGAAGAGTGAGGAATTACAGAAGGACCAAGAGTCATTGCAAAGC
GAAAAATTACATAATGATGATAAATCACAGAAGaaagaattatcaaaaga
aGGAAACTCACAAAGAGACGAAAAATTACTAAATGCCAAGGAATCACCAA
AACGCGGAGAGTCtcgaaaagacaaaaaattgcaaCATAGCCAGGAATCA
CCGAAAAACGAAGGATccttgaaagaagaaaaattacaacaTGACGAGGA
GTCGCCGAAAGAAGAATTACCAAAAGACGAAGAATCCCTGAAAGACGATA
AATCCTTGAAAGACAAACAATTAAGAACAAACAAAAAGCCACTTGAACAG
AAGGATTTACAGAAGACCGATGGATCACCAAAGGATGACAAATTACAGAA
GGACGAAAAACTACCcaatgaagaaaaatttcaaaaggtcGAACACAAGC
AAGAACTGGTAGAAGATAGTGATGATGACAGGGATGAAATGTTTGTACTG
GACAAGTCTGACGTGTGGAGTAATATGCATAAAGACGATGAACCACCTAA
AGAAGAATTACCAAAAGACGAAGAATCTCTGAAAGACGATAAATCCTTGA
AAGACAAACAATTACGAAAGAACGAAAAGCCACTCGAACAGAAAGATTTA
CAGAAGACCGATGGATCACCAAAGGACGACAAATTACAGAAGGATGAAAA
ATTACCCAATGAAGAAGAATTTCGAAAGGTCGAACACAAGCAAGAACTGA
TAGAAAATAGTGATGCTGACAGTGATGAAATGTTTGTTCTGGACAAGTCT
GACGTGTGGAGTAATATACATAAAGACGATGAATCACCGAAAAAAGAATT
ACCAAAAGACAAAGAATCTCTGAAAGACGATAAATCCTCGGAAGACAAAC
AATTAAGAAAGAACGAAAAGCCACTCGAACAGAAAGATTTACAGAAGACC
GATGGATCACCAAAGGACAACAAATTCCAGAACAACGAAAAACTACCcaa
tgaagaaaattttcgCAATGTCAAACACAAGCAAGAACTGACAGAAAATA
GTGATGCTGACAGTGATGAATTATTTGTACTGGACAAGGCTGATGTGTGG
AGTAATAATGATACTGGAAATACTCGAAGATCCtcaagaaaacgaaaaaa
aacgATCAGCTACAAAGGGATGGAATTAGAACATGATGGCCTAGAAACGT
TTGGTGATCCTGACTTTATCCGTAAGCTACTTTTATTGTGTTTAACATTG
AGGAAGTATTATTAAATCATAATCATGGAGATTTATGCTGTCGTAAAAAT
GCATGCAAGATATAGAAcacatgaaaaatgaaacaggaaataaaatttaa
gaaaaattaatcGCTTGTTTTAAAACGTTTTGGCTATATCTGAAAAGTGA
TTTTAATTCTCAGGTACCAAATAACCGGGGCTGGGCGGACAGGCGTGTGT
TTGCGGTGATGGACAAAATGTGTACTTtctcactttttctttttttgtac
cATGGTACTAACTTGTAATTTATGTTCAAAATAGGGGGACCACCCCTTTG
TACCATGGTACTAGCttttaatttaaaatcaaaagtgGTGGACAACCCTT
TTAGCATAGGACACTTTTTAGAAATT
Run BLAST on NCBI

protein sequence of TCONS_00038158-protein

>TCONS_00038158-protein ID=TCONS_00038158-protein|Name=TCONS_00038158-protein|organism=Clytia hemisphaerica|type=polypeptide|length=420bp
VLKSEELQKDQESLQSEKLHNDDKSQKKELSKEGNSQRDEKLLNAKESPK
RGESRKDKKLQHSQESPKNEGSLKEEKLQHDEESPKEELPKDEESLKDDK
SLKDKQLRTNKKPLEQKDLQKTDGSPKDDKLQKDEKLPNEEKFQKVEHKQ
ELVEDSDDDRDEMFVLDKSDVWSNMHKDDEPPKEELPKDEESLKDDKSLK
DKQLRKNEKPLEQKDLQKTDGSPKDDKLQKDEKLPNEEEFRKVEHKQELI
ENSDADSDEMFVLDKSDVWSNIHKDDESPKKELPKDKESLKDDKSSEDKQ
LRKNEKPLEQKDLQKTDGSPKDNKFQNNEKLPNEENFRNVKHKQELTENS
DADSDELFVLDKADVWSNNDTGNTRRSSRKRKKTISYKGMELEHDGLETF
GDPDFIRKLLLLCLTLRKYY
Run BLAST on NCBI

transcript from alignment at sc0001788:35247..40478+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038158 ID=TCONS_00038158|Name=TCONS_00038158|organism=Clytia hemisphaerica|type=transcript|length=5232bp|location=Sequence derived from alignment at sc0001788:35247..40478+ (Clytia hemisphaerica)
atgtacTGAAGAGTGAGGAATTACAGAAGGACCAAGAGTCATTGCAAAGC
GAAAAATTACATAATGATGATAAATCACAGAAGaaagaattatcaaaaga
aGGAAACTCACAAAGAGACGAAAAATTACTAAATGCCAAGGAATCACCAA
AACGCGGAGAGTCtcgaaaagacaaaaaattgcaaCATAGCCAGGAATCA
CCGAAAAACGAAGGATccttgaaagaagaaaaattacaacaTGACGAGGA
GTCGCCGAAAGAAGAATTACCAAAAGACGAAGAATCCCTGAAAGACGATA
AATCCTTGAAAGACAAACAATTAAGAACAAACAAAAAGCCACTTGAACAG
AAGGATTTACAGAAGACCGATGGATCACCAAAGGATGACAAATTACAGAA
GGACGAAAAACTACCcaatgaagaaaaatttcaaaaggtcGAACACAAGC
AAGAACTGGTAGAAGATAGTGATGATGACAGGGATGAAATGTTTGTACTG
GACAAGTCTGACGTGTGGAGTAATAGTAAGTATCAAAGCTCTGTTTAAAA
AAGCGATATTAGAgttaaaaagttacaaatttttgaaattctttaatggT
AGTTGGGAGTCAGTAGTATCTTTAGCGTAATTAAGAAACGTTTTTTACCA
ACATTCCTATGACTAGCTGGCTGTATCATTTGAGGCGTGCGATAGTATgc
gcacacctccacacacCTGAAATGTCTTAGGAGTGCGATTTATTGCAAGC
CATAAAATTAGTTTTACAACTCAAAGTTGAGCATAGCACTCCTAATCGCA
AGATGGATTCACTTGTTATCATGTGATTATATATACTAATCAGTAATCAC
ACAtctaaattactaaaattaaggttttagGAGTGTTTTTTTGTACTCTG
TACTAAAAGATAGCCGTTATGAACAATCTCGTTTCATAACGATTTTCCAG
TGCATAAAGACGATGAACCACCTAAAGAAGAATTACCAAAAGACGAAGAA
TCTCTGAAAGACGATAAATCCTTGAAAGACAAACAATTACGAAAGAACGA
AAAGCCACTCGAACAGAAAGATTTACAGAAGACCGATGGATCACCAAAGG
ACGACAAATTACAGAAGGATGAAAAATTACCCAATGAAGAAGAATTTCGA
AAGGTCGAACACAAGCAAGAACTGATAGAAAATAGTGATGCTGACAGTGA
TGAAATGTTTGTTCTGGACAAGTCTGACGTGTGGAGTAATAGTAAGTATT
GAAGCTCTGTTTAAAATAGCGATATTAGAgttaaaaagttacaaaatttt
gaaattctttcccTAATGATAGTCGGGAGTCAGAAGTTCCTTTAGCCTAA
TTAAGAAACGTCTTTTACCAACATTCCTTTGGCTAGACattttttgtact
ttgtacTAATAGTTGGCCGTAATAAACAATCTTGTTTTATAATGATTTTC
CAGTACATAAAGACGATGAATCACCGAAAAAAGAATTACCAAAAGACAAA
GAATCTCTGAAAGACGATAAATCCTCGGAAGACAAACAATTAAGAAAGAA
CGAAAAGCCACTCGAACAGAAAGATTTACAGAAGACCGATGGATCACCAA
AGGACAACAAATTCCAGAACAACGAAAAACTACCcaatgaagaaaatttt
cgCAATGTCAAACACAAGCAAGAACTGACAGAAAATAGTGATGCTGACAG
TGATGAATTATTTGTACTGGACAAGGCTGATGTGTGGAGTAATAGTAAGT
ATCAAAACTCTGTTTAAATTAGCGATATTAGAgttaaaaagttacaaatt
tttgaaattctttctcTAGGTAGTCAGGGGTCAGTAGTTCCTTTAGCCTA
ATTAAGAAACGTCTTTTACCAACATTCCTATGACTAGACATTTTTAGTAC
TCTGTTTTTCCAGAGACAAATAACTGTTATAAATACCGATTTTTGCCGTT
TCACCAGGTTTCACACACATTATAGCTCCTCTCAGACTTATCCAGCATCC
CCTGTTTCACAAAGGAGGATTTTAAAAGAAACCTCCTCTCTAAAACTTCT
AANCGTTATAAATACCGATTTTTGCCGTTTCACCAGGTTTCACACACATT
ATAGCTCCTCTCAGACTTATCCAGCATCCCCTGTTTTACAAAGGAGGATT
TTAAAAGAAACCTCCTCTCTAAAACTTCTAACAGCTATATAATAAATTAT
GTTGTTGAGATATCTTTGTTAGTTGATTTTCCAACCTCttcttgtgtttt
ttttttaaccaaaccttttttttttggtcaCTTTGGTGTTTTTCGgagaa
atttaatgaaaattttagcttcaaagAGAAAGTGACCTGTTATAAACCAT
TTGAAAGctcccaaaaaataaaaacaagattaGAGAAATTACAGAAGGAC
GAAAAACTACCcaatgaagaaaaatttcaaaaggtcGAACACAAGCAAGA
ACTGGTAGAAGATAGTGATGATGACAGGGATGAAATGTTTGTACTGGACA
AGTCTGACGTGTGGAGTAATAGTAAGTATCAAAGCTCTGTTTAAAAAAGC
GATATTAGAgttaaaaagttacaaatttttgaaattctttaatggTAGTT
GGGAGTCAGTAGTATCTTTAGCGTAATTAAGAAACGTTTTTTACCAACAT
TCCTATGACTAGCTGGCTGTATCATTTGAGGCGTGCGATAGTATgcgcac
acctccacacacCTGAAATGTCTTAGGAGTGCGATTTATTGCAAGCCATA
AAATTAGTTTTACAACTCAAAGTTGAGCATAGCACTCCTAATCGCAAGAT
GGATTCACTTGTTATCATGTGATTATATATACTAATCAGTAATCACACAt
ctaaattactaaaattaaggttttagGAGTGTTTTTTTGTACTCTGTACT
AAAAGATAGCCGTTATGAACAATCTCGTTTCATAACGATTTTCCAGTGCA
TAAAGACGATGAACCACCTAAAGAAGAATTACCAAAAGACGAAGAATCTC
TGAAAGACGATAAATCCTTGAAAGACAAACAATTACGAAAGAACGAAAAG
CCACTCGAACAGAAAGATTTACAGAAGACCGATGGATCACCAAAGGACGA
CAAATTACAGAAGGATGAAAAATTACCCAATGAAGAAGAATTTCGAAAGG
TCGAACACAAGCAAGAACTGATAGAAAATAGTGATGCTGACAGTGATGAA
ATGTTTGTTCTGGACAAGTCTGACGTGTGGAGTAATAGTAAGTATTGAAG
CTCTGTTTAAAATAGCGATATTAGAGTTAAAAAGTTACAAAATTTTGAAA
TTCTTTCCCTAATGATAGTCGGGAGTCAGAAGTTCCTTTAGCCTAATTAA
GAAACGTCTTTTACCAACATTCCTATGGCTAGACATTTTTTGTACTTTGT
ACTAATAGTTGGCCGTAATAAACAATCTTGTTTTATAATGATTTTCAAGT
ACATAAAGACGATGAATCACCGAAAAAAGAATTACCAAAAGACAAAGAAT
CTCTGAAAGACGATAAATCCTCGGAAGACAAACAATTAAGAAAGAACGAA
AAGCCACTCGAACAGAAAGATTTACAGAAGACCGATGGATCACCAAAGGA
CAACAAATTCCAGAACAACGAAAAACTACCCAATGAAGAAAAATTTCGCA
ATGTCAAACACAAGCAAGAACTGACAGAAAATAGTGATGCTGACAGTGAT
GAATTGTTTGTACTGGACAAGGCTGATGTGTGGAGTAATAGTAAGTATCA
AAACTCTGTTTAAATTAGCGATATTAGAGTTAAAAAGTTACAAATTTTTG
AAATTCTTTCTCTAGGTAGTCGGGAGTCAGTAGTTCCTTTAGCCTAATTA
AGAAACGTCTTTTACCAACATTCCTATGACTAGACATTTTTAGTACTCTG
TTTTTCCAGAGACAAATGGCCGTCATAAATACCAATTTTTGCCGTTTCAC
CAGGTTTCACACACATTATAGCTCCTGTCAGACTTATCCAGCATCCCCAG
GAGGTTTTTGAAGAGCATTTAAAGCAGGATTTTAAAAGAAACCTCCTCTC
TAAAACTTCTAACAGCTATATAATAAATTATGTTGTTGAGATATCTTTGT
TAGTTGATTTTCCAACCTCTTCTTATGTTTTTTTTAAAACCAAACCTTTT
TCTTTGGTCACTTTGGTGTTTTTCGGAGAAATTTAATGAAAATTTTAGCT
TCAAAGAGAAAGTGACCTGTTATAAACCATTCGAAAGCTCCCAAAAAATA
AAAACAAGATTAGAGATGTATTGGGAGTATAGGTGGTTTCTCTACCTAAC
TCCGGATACTAAGCTTCAAAGAGAGCAAAAACCAGAGAAGACAGCTGTTC
CTGGCTAAAAATCACTCAGAAATCATCTATACATTACCTGTAATATATAT
CTAATCTCACTGCGTTTGTTCCATTCGGCTCCAATGTCAGTCCATTTTTT
CTCGAATGGACCTCCTAAACAGTTACTTAGTAGTATGCGTATTATAACAT
CTCTCTTTTCTAAAGCCAAAAtgttcattaaattttgattcttgcctgag
accgtcatttTTCTCCCCGGAAAACACACCAAAGTGTGAACTTTGCATAA
CACAAATTGAACAGATCCCTCCACTAAGCTTTTTCTACGTTTCAGATGAT
ACTGGAAATACTCGAAGATCCtcaagaaaacgaaaaaaaacgATCAGCTA
CAAAGGGNTTCAGATGATACTGGAAATACTCGAAGATCCtcaagaaaacg
aaaaaaaacgATCAGCTACAAAGGGATGGAATTAGAACATGATGGCCTAG
AAACGTTTGGTGATCCTGACTTTATCCGTAAGCTACTTTTATTGTGTTTA
ACATTGAGGAAGTATTATTAAATCATAATCATGGAGATTTATGCTGTCGT
AAAAATGCATGCAAGATATAGAAcacatgaaaaatgaaacaggaaataaa
atttaagaaaaattaatcGCTTGTTTTAAAACGTTTTGGCTATATCTGAA
AAGTGATTTTAATTCTCAGGTACCAAATAACCGGGGCTGGGCGGACAGGC
GTGTGTTTGCGGTGATGGACAAAATGTGTACTTtctcactttttcttttt
ttgtaccATGGTACTAACTTGTAATTTATGTTCAAAATAGGGGGACCACC
CCTTTGTACCATGGTACTAGCttttaatttaaaatcaaaagtgGTGGACA
ACCCTTTTAGCATAGGACACTTTTTAGAAATT

Coding sequence (CDS) from alignment at sc0001788:35247..40478+

>TCONS_00038158 ID=TCONS_00038158|Name=TCONS_00038158|organism=Clytia hemisphaerica|type=CDS|length=5052bp|location=Sequence derived from alignment at sc0001788:35247..40478+ (Clytia hemisphaerica)
gtacTGAAGAGTGAGGAATTACAGAAGGACCAAGAGTCATTGCAAAGCGA
AAAATTACATAATGATGATAAATCACAGAAGaaagaattatcaaaagaaG
GAAACTCACAAAGAGACGAAAAATTACTAAATGCCAAGGAATCACCAAAA
CGCGGAGAGTCtcgaaaagacaaaaaattgcaaCATAGCCAGGAATCACC
GAAAAACGAAGGATccttgaaagaagaaaaattacaacaTGACGAGGAGT
CGCCGAAAGAAGAATTACCAAAAGACGAAGAATCCCTGAAAGACGATAAA
TCCTTGAAAGACAAACAATTAAGAACAAACAAAAAGCCACTTGAACAGAA
GGATTTACAGAAGACCGATGGATCACCAAAGGATGACAAATTACAGAAGG
ACGAAAAACTACCcaatgaagaaaaatttcaaaaggtcGAACACAAGCAA
GAACTGGTAGAAGATAGTGATGATGACAGGGATGAAATGTTTGTACTGGA
CAAGTCTGACGTGTGGAGTAATATGCATAAAGACGATGAACCACCTAAAG
AAGAATTACCAAAAGACGAAGAATCTCTGAAAGACGATAAATCCTTGAAA
GACAAACAATTACGAAAGAACGAAAAGCCACTCGAACAGAAAGATTTACA
GAAGACCGATGGATCACCAAAGGACGACAAATTACAGAAGGATGAAAAAT
TACCCAATGAAGAAGAATTTCGAAAGGTCGAACACAAGCAAGAACTGATA
GAAAATAGTGATGCTGACAGTGATGAAATGTTTGTTCTGGACAAGTCTGA
CGTGTGGAGTAATATACATAAAGACGATGAATCACCGAAAAAAGAATTAC
CAAAAGACAAAGAATCTCTGAAAGACGATAAATCCTCGGAAGACAAACAA
TTAAGAAAGAACGAAAAGCCACTCGAACAGAAAGATTTACAGAAGACCGA
TGGATCACCAAAGGACAACAAATTCCAGAACAACGAAAAACTACCcaatg
aagaaaattttcgCAATGTCAAACACAAGCAAGAACTGACAGAAAATAGT
GATGCTGACAGTGATGAATTATTTGTACTGGACAAGGCTGATGTGTGGAG
TAATAATGATACTGGAAATACTCGAAGATCCtcaagaaaacgaaaaaaaa
cgATCAGCTACAAAGGGATGGAATTAGAACATGATGGCCTAGAAACGTTT
GGTGATCCTGACTTTATCCGTAAGCTACTTTTATTGTGTTTAACATTGAG
GAAGTATTATTAAgtacTGAAGAGTGAGGAATTACAGAAGGACCAAGAGT
CATTGCAAAGCGAAAAATTACATAATGATGATAAATCACAGAAGaaagaa
ttatcaaaagaaGGAAACTCACAAAGAGACGAAAAATTACTAAATGCCAA
GGAATCACCAAAACGCGGAGAGTCtcgaaaagacaaaaaattgcaaCATA
GCCAGGAATCACCGAAAAACGAAGGATccttgaaagaagaaaaattacaa
caTGACGAGGAGTCGCCGAAAGAAGAATTACCAAAAGACGAAGAATCCCT
GAAAGACGATAAATCCTTGAAAGACAAACAATTAAGAACAAACAAAAAGC
CACTTGAACAGAAGGATTTACAGAAGACCGATGGATCACCAAAGGATGAC
AAATTACAGAAGGACGAAAAACTACCcaatgaagaaaaatttcaaaaggt
cGAACACAAGCAAGAACTGGTAGAAGATAGTGATGATGACAGGGATGAAA
TGTTTGTACTGGACAAGTCTGACGTGTGGAGTAATATGCATAAAGACGAT
GAACCACCTAAAGAAGAATTACCAAAAGACGAAGAATCTCTGAAAGACGA
TAAATCCTTGAAAGACAAACAATTACGAAAGAACGAAAAGCCACTCGAAC
AGAAAGATTTACAGAAGACCGATGGATCACCAAAGGACGACAAATTACAG
AAGGATGAAAAATTACCCAATGAAGAAGAATTTCGAAAGGTCGAACACAA
GCAAGAACTGATAGAAAATAGTGATGCTGACAGTGATGAAATGTTTGTTC
TGGACAAGTCTGACGTGTGGAGTAATATACATAAAGACGATGAATCACCG
AAAAAAGAATTACCAAAAGACAAAGAATCTCTGAAAGACGATAAATCCTC
GGAAGACAAACAATTAAGAAAGAACGAAAAGCCACTCGAACAGAAAGATT
TACAGAAGACCGATGGATCACCAAAGGACAACAAATTCCAGAACAACGAA
AAACTACCcaatgaagaaaattttcgCAATGTCAAACACAAGCAAGAACT
GACAGAAAATAGTGATGCTGACAGTGATGAATTATTTGTACTGGACAAGG
CTGATGTGTGGAGTAATAATGATACTGGAAATACTCGAAGATCCtcaaga
aaacgaaaaaaaacgATCAGCTACAAAGGGATGGAATTAGAACATGATGG
CCTAGAAACGTTTGGTGATCCTGACTTTATCCGTAAGCTACTTTTATTGT
GTTTAACATTGAGGAAGTATTATTAAgtacTGAAGAGTGAGGAATTACAG
AAGGACCAAGAGTCATTGCAAAGCGAAAAATTACATAATGATGATAAATC
ACAGAAGaaagaattatcaaaagaaGGAAACTCACAAAGAGACGAAAAAT
TACTAAATGCCAAGGAATCACCAAAACGCGGAGAGTCtcgaaaagacaaa
aaattgcaaCATAGCCAGGAATCACCGAAAAACGAAGGATccttgaaaga
agaaaaattacaacaTGACGAGGAGTCGCCGAAAGAAGAATTACCAAAAG
ACGAAGAATCCCTGAAAGACGATAAATCCTTGAAAGACAAACAATTAAGA
ACAAACAAAAAGCCACTTGAACAGAAGGATTTACAGAAGACCGATGGATC
ACCAAAGGATGACAAATTACAGAAGGACGAAAAACTACCcaatgaagaaa
aatttcaaaaggtcGAACACAAGCAAGAACTGGTAGAAGATAGTGATGAT
GACAGGGATGAAATGTTTGTACTGGACAAGTCTGACGTGTGGAGTAATAT
GCATAAAGACGATGAACCACCTAAAGAAGAATTACCAAAAGACGAAGAAT
CTCTGAAAGACGATAAATCCTTGAAAGACAAACAATTACGAAAGAACGAA
AAGCCACTCGAACAGAAAGATTTACAGAAGACCGATGGATCACCAAAGGA
CGACAAATTACAGAAGGATGAAAAATTACCCAATGAAGAAGAATTTCGAA
AGGTCGAACACAAGCAAGAACTGATAGAAAATAGTGATGCTGACAGTGAT
GAAATGTTTGTTCTGGACAAGTCTGACGTGTGGAGTAATATACATAAAGA
CGATGAATCACCGAAAAAAGAATTACCAAAAGACAAAGAATCTCTGAAAG
ACGATAAATCCTCGGAAGACAAACAATTAAGAAAGAACGAAAAGCCACTC
GAACAGAAAGATTTACAGAAGACCGATGGATCACCAAAGGACAACAAATT
CCAGAACAACGAAAAACTACCcaatgaagaaaattttcgCAATGTCAAAC
ACAAGCAAGAACTGACAGAAAATAGTGATGCTGACAGTGATGAATTATTT
GTACTGGACAAGGCTGATGTGTGGAGTAATAATGATACTGGAAATACTCG
AAGATCCtcaagaaaacgaaaaaaaacgATCAGCTACAAAGGGATGGAAT
TAGAACATGATGGCCTAGAAACGTTTGGTGATCCTGACTTTATCCGTAAG
CTACTTTTATTGTGTTTAACATTGAGGAAGTATTATTAAgtacTGAAGAG
TGAGGAATTACAGAAGGACCAAGAGTCATTGCAAAGCGAAAAATTACATA
ATGATGATAAATCACAGAAGaaagaattatcaaaagaaGGAAACTCACAA
AGAGACGAAAAATTACTAAATGCCAAGGAATCACCAAAACGCGGAGAGTC
tcgaaaagacaaaaaattgcaaCATAGCCAGGAATCACCGAAAAACGAAG
GATccttgaaagaagaaaaattacaacaTGACGAGGAGTCGCCGAAAGAA
GAATTACCAAAAGACGAAGAATCCCTGAAAGACGATAAATCCTTGAAAGA
CAAACAATTAAGAACAAACAAAAAGCCACTTGAACAGAAGGATTTACAGA
AGACCGATGGATCACCAAAGGATGACAAATTACAGAAGGACGAAAAACTA
CCcaatgaagaaaaatttcaaaaggtcGAACACAAGCAAGAACTGGTAGA
AGATAGTGATGATGACAGGGATGAAATGTTTGTACTGGACAAGTCTGACG
TGTGGAGTAATATGCATAAAGACGATGAACCACCTAAAGAAGAATTACCA
AAAGACGAAGAATCTCTGAAAGACGATAAATCCTTGAAAGACAAACAATT
ACGAAAGAACGAAAAGCCACTCGAACAGAAAGATTTACAGAAGACCGATG
GATCACCAAAGGACGACAAATTACAGAAGGATGAAAAATTACCCAATGAA
GAAGAATTTCGAAAGGTCGAACACAAGCAAGAACTGATAGAAAATAGTGA
TGCTGACAGTGATGAAATGTTTGTTCTGGACAAGTCTGACGTGTGGAGTA
ATATACATAAAGACGATGAATCACCGAAAAAAGAATTACCAAAAGACAAA
GAATCTCTGAAAGACGATAAATCCTCGGAAGACAAACAATTAAGAAAGAA
CGAAAAGCCACTCGAACAGAAAGATTTACAGAAGACCGATGGATCACCAA
AGGACAACAAATTCCAGAACAACGAAAAACTACCcaatgaagaaaatttt
cgCAATGTCAAACACAAGCAAGAACTGACAGAAAATAGTGATGCTGACAG
TGATGAATTATTTGTACTGGACAAGGCTGATGTGTGGAGTAATAATGATA
CTGGAAATACTCGAAGATCCtcaagaaaacgaaaaaaaacgATCAGCTAC
AAAGGGATGGAATTAGAACATGATGGCCTAGAAACGTTTGGTGATCCTGA
CTTTATCCGTAAGCTACTTTTATTGTGTTTAACATTGAGGAAGTATTATT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022805XLOC_022805Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038158-exon-sc0001788-1491911889:35247..35771TCONS_00038158-exon-sc0001788-1491911889:35247..35771Clytia hemisphaericaexon
TCONS_00038158-exon-sc0001788-1510915933:35247..35771TCONS_00038158-exon-sc0001788-1510915933:35247..35771Clytia hemisphaericaexon
TCONS_00038158-exon-sc0001788-1575043694:35247..35771TCONS_00038158-exon-sc0001788-1575043694:35247..35771Clytia hemisphaericaexon
TCONS_00038158-exon-sc0001788-1491911889:36197..36487TCONS_00038158-exon-sc0001788-1491911889:36197..36487Clytia hemisphaericaexon
TCONS_00038158-exon-sc0001788-1510915933:36197..36487TCONS_00038158-exon-sc0001788-1510915933:36197..36487Clytia hemisphaericaexon
TCONS_00038158-exon-sc0001788-1575043694:36197..36487TCONS_00038158-exon-sc0001788-1575043694:36197..36487Clytia hemisphaericaexon
TCONS_00038158-exon-sc0001788-1491911889:36700..36990TCONS_00038158-exon-sc0001788-1491911889:36700..36990Clytia hemisphaericaexon
TCONS_00038158-exon-sc0001788-1510915933:36700..36990TCONS_00038158-exon-sc0001788-1510915933:36700..36990Clytia hemisphaericaexon
TCONS_00038158-exon-sc0001788-1575043694:36700..36990TCONS_00038158-exon-sc0001788-1575043694:36700..36990Clytia hemisphaericaexon
TCONS_00038158-exon-sc0001788-1491911889:39960..40478TCONS_00038158-exon-sc0001788-1491911889:39960..40478Clytia hemisphaericaexon
TCONS_00038158-exon-sc0001788-1510915933:39960..40478TCONS_00038158-exon-sc0001788-1510915933:39960..40478Clytia hemisphaericaexon
TCONS_00038158-exon-sc0001788-1575043694:39960..40478TCONS_00038158-exon-sc0001788-1575043694:39960..40478Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038158-proteinTCONS_00038158-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001788supercontigsc0001788:35247..40478 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	7.692e-09	0	0	0.744553	0	0	0.455377	0.803997	0.819054	0.387966	0.752262	0.16016	0	0	0	0	0	0	0	0	0	0	1.5003	1.04143	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038158 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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