XLOC_021621 (gene) - C. hemisphaerica

Overview
NameXLOC_021621
Unique NameXLOC_021621
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001487:6860..9432+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021621 ID=XLOC_021621|Name=XLOC_021621|organism=Clytia hemisphaerica|type=gene|length=2573bp|location=Sequence derived from alignment at sc0001487:6860..9432+ (Clytia hemisphaerica)
CAAACCTATGGAAGAGCAAGTCATTGTTAAAAAAACAAAGCCGCGCTTTG
TCCTTTGTGCAGGGACCTCGTTGCcgccaaaatttgaattttcgagattt
tcaaCATGgcgtcgaaaattttttttcccgacACCGCCTGCATAACAACC
ATTCAAGCTTGAACATCTTTCTTCATGCTTGTGCTATCACTATGGAGTTT
TGATGACAGGATTCAGAGATACTTCATGTACCAACATCCAGAAGGAATAA
TTCTCAAACTTTTTATTTATCGAGACAAGCCACCCGACACTTTGCAGCTT
CAAAATCCGGCAAGCTCTTCACTTTCAAGTTGTTGTGATCAAAGATGGAC
TTGAATCAAGACGAATTGTGAATGAATGGGCTAGAAATTTCTACTGGTGA
TAGATGGAGAGTTGTTCTAAACatagaaagttgtttttttaccCATTCAA
CTCTGTGAGGGCccattcacttttttcaaaatcatgcTGAAATGACGTTG
TTGTTAAGATATTTTGCCTCAGTCATCTCGTGTAGACATCTAAACTCAAG
CgatggtttttaaaaattttagtttgACTTTATATAATTCACTCATCTCC
ACATTTCAGGCttgaatttatttaatttgataCATGTTTACAAGGAAATC
TTATCATGGATCAGCATCTTGCTGCTTTATGTGCCTTGTGCAGAATTTGC
GGGGGAAAAATATCCACAAAAGGAAGTTACAAATCACCAAAGCCAGTCAC
AGTTTTCCAAGATACAATCAACAAATTTGATGCCTTGAAAGATATCAATC
ATGATGATGTCGCTGTACATCCCAAATCTGTTTGTAACAAATGCTACATG
AAGTTATACCACCTTAAAGACCGTACATCACAGGTTTTGAATTGGTCTGT
CTTTCAATACAAGCCACACGTTGATGGTGACTTCTGCTATGTTTGTGTTA
ATGGAAATCCAACAAGCAGATCAGAACTAGTGAAAGAGACATTAATTTCA
GCTTCTAAGtatggttttaaggtttgtaaAGGTTTATTATGAACAGTCTT
TTTTCATATTTGTTTATGGTGCTTTTAATACCTTCCAGGATCACAAaatt
tcaaggggcaaaaattTGATGCCATAAAGCTATAAAATCTGAGGGCAGGG
AATGGCTATTGGCTTTTCTATTGATAGACAACAAAGTTGGACCAGGTAAT
AGGTTTGTGAGATGATGACACACATGATCTGTCCTACGGTGTACTGCGAG
TTTGATCATGAGTGAGAGACTGGCAGAGACtgaacttttaaaaattcagC
CCATTTTTCGACTCATATTTTGGGGCTGAAAATGACGCGAACACAACCTA
TTTGTGATCTAGGCCTAGCCgtaaaatttggagattttgcTATGAACCAT
GGGAGGAATCTTTAggttggatttcattttttatctggttatccctttaa
aaTTCATTGTCCCTCATCTTAAGTTCATGTGTGTTTTATTTGAATATATA
TTTACTCTATTTTAACCAATCTTCTGTTATTTTATAGTTTGTGTATTGTA
ACATTCATAACTCGACAAATTTCAACAGTATGACCAGTTGGATATTATGG
CAATAGATAATAAAAAAGCTGCTAAGTATACTAAATTGCTATTTACCAAA
ACCAAACAATCTTGTTgttatttcaatttcttttttatacgTCTAGGATT
TTTGTTGTATTGATTTATTGACACTAAAACAGTCGAGagtatttcttttg
tttgtttcaCATATTAAACATTATTCTTAATAAACCATATAGATTCATGt
ttttttcatgcatttttaATACATCTTTCTAAATGTATATCATCATCCTT
TTTTTGTAGGAGCTGGGAAATAGTTGTTATGGGTGTAGTGGTTCATCAGA
GTCAGTTAAAATCTTGGAAATTTTGGATCATATAGGTAACTACACTATCA
AAATTCATGGTAAGCCTATTAAAACTGAAACCCTCACCAAACTTCATTTT
CCAAATATCCTCACAACAATAAACATCAACAGTGTACTCAAAACTCTACA
GCAATCTGTAATATGCTGGGGTAATGAAGATTTTGATGATCTGGTGTCTA
AGAAGCTAGGGGATTTGAATGActttcaatttttatcaattgATAACACT
GTCACGAGTCATTTAGAGACATCTGATGGCAAAACTATGTCTGACATGAA
GATAATCAGACATGAAAATTGTGACATCTTTATTGACTCAAGTAAaggtt
tggaaaatatttttttcttatttctatAAACTCGTACAGTTTTGAGGAAA
CCGGAAGTCAAACTGCCAAgccttttaaaaacattttgtatATAATTGTA
TCTGCCTTCATTAAACATATTTTAGCAAGAACTTTGTCNtgaattattcc
attctgttgtttcctttaagttaaatatggtttcactcatcttattagca
gactttgtcagtgtttacaaagattttgtagtcaaccacgtgaaggtgca
aaataatccattgatctaggggctactggacagtatgatggcaactaacc
tgaaagtatataatgaagaGGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036619TCONS_00036619Clytia hemisphaericatranscript
TCONS_00036620TCONS_00036620Clytia hemisphaericatranscript
TCONS_00036621TCONS_00036621Clytia hemisphaericatranscript
TCONS_00036622TCONS_00036622Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036619-proteinTCONS_00036619-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001487supercontigsc0001487:6860..9432 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.19	1.41	1.13	0.69	1.41	1.18	2.44	2.69	3.61	2.07	3.67	4.1	4.26	6.4	2.63	2.41	2.48	2.63	2.58	2.44	3.19	2.5	0.95	1.53	10.48	10.09	2.19	2.13	0.81	0.8