XLOC_024395 (gene) - C. hemisphaerica

Overview
NameXLOC_024395
Unique NameXLOC_024395
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002351:442..4895+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024395 ID=XLOC_024395|Name=XLOC_024395|organism=Clytia hemisphaerica|type=gene|length=4454bp|location=Sequence derived from alignment at sc0002351:442..4895+ (Clytia hemisphaerica)
GAggttatgagtacgaacggatgcgaaaatcaatttgtcccccgactttt
caagggccgtaggcgacgcaccggactctgcaagGCTTTGCCNAATAAGT
TTTTTCTCTTTATGCCTTTGCTGAggttatgagtacgaacggatgcgaaa
atcaatttgtcccccgacttttcaagggccgtaggcgacgcaccggactc
tgcaagGCTTTGcctattgcaagaccatatctcctggcaaacagattcca
tggtcgacgaatagttaacaagaaaagagtTTAAGGTGCCTTTAAAggga
taaaaaatgaaactttattAATCCAGGTATAGCAGATGAAAAATTCAGGT
CAAAGTCATATACAGATCCTTTCCAAGATTGTAATATAATCCGAATTTTA
GAATTTCCACTAAGGAGTCCATATTGAGGATCAGGATTGAGTCTAGAATA
AAATGACCATGGTATGTAAAGGAAACCTGTCATTTGCCATGTGTCAAGTG
GTCAATCAtaataaaagaattttgttCAACTATGGGTCTCCTTCTAGTCT
GCTCTaaatcattttagtttaatggcTAGCTTGTGTAAACACAAATTTTC
CAAGTTCAAATTTCTCACTTTAATTTGGGTTAACCATAGTGAAAAGATTT
CTAGAATTTGGATTGAGCTGGACTGAGTGAACTTCTGAATCAGTAGAATG
TGAACTTGTTGTTAGGGTTGATGTATACAGCAAATGTGTAACTGTGAAAA
TTGGCAGACTTTGGGCTAATCAGAAGAGTGTAAATGGTCTGCATGGAGAA
TGGAGCTGGGCgtgaattttgacattttttcctCTCTCAAAGAATATCAA
ACCACAAATTCTCAAATTTGTGCATTTTTGTGTTGCCAAAAATCAAAGTA
GCTGAACTGACTAATTATTTTATACNCATTTTTCCCTCTCTCAAAGAATA
TCAAACCACAAATTCTCAAATTTGTGCATTTTTGTGTTGCCAAAAATCAA
AGTAGCTGAACTGACTAAATATTTTATATACTTCCAAATTCATTGGAAGA
GACTCTCGAGAGAGATATCGATAACTTTTTAACACTTTTACCATCCTCAA
TTTCCCTCAATTTATTTTCACAATAATTTGgaataaagaaataaataata
aaaaattcagACTCTGATAGTGCAGCTTATTACAAGGATAATTTTATCAG
TTAATAAGTTGATATACTTTGAGCTAGATAGCGATTTTATGCGCATTGAA
AAGATTATCGTGAGTGGGATattatcaacaaaaaaatttcaaaatggaga
tgaaaaatgaaaaagaaaaaaaccaaCTCCTGGTAGAATTGTGATATAAT
CACCATTTTTACAGGGGATTCTTGAATCTTACAACATATCATTActgtga
aaaaaacttttcaaaaatatttattcagtcaaaagatattgcACAAAGCT
CATCACTGATTGACTCtgaaaaaacaccaaaaaacagCGAAAGACAGCCT
TTTTTACACTTAACTAGCTGAAGACTTTGTgtcataattttttaattgaa
taagtatttttgaaatatacttTAATATGACAATTATATGACATGTATTT
TTAAGTGTAAATGATTAATTTGATCAAGTAAAATGAGATCAGGAAAATAC
AAGTTAGGCGGTCCAATTGTAAGtaatttgtttgcttttttgataGAGAA
GAAGTCAAGTGATTCTCAGATTACAAGCTAAAGTTTCAAATCTAGAAATT
CTTGCTCTGACAAACATTGATATTATAAATATTGGCGTTTATTGAATCAG
ATATCTTACCAACAAAGCATACATAGTTTTTTGTAAAGAATTCTTTTTCA
AGAGTCACAGGGCTCAATATCGAGAAATTTTTAAGAGTTTTTCAAGAATA
ACACTGAACCTCAAATTTTGGCCGAAGAGGGTTCTTTTCAGACAACTTCT
ATGTTATTGAATGGTTGTGAAGAAGTAAATTGCACagggaaaaaatctaa
atttttgagacGAATTTTCGTGGCATATTCAAGTAAAATCATCTTTTAAT
ATCTTCAAAACTTAAAAGTCACTTAAGTTCgggaaaaattaagaattgcG
ACGCTCATTGTGTATTATTTTCTGTATCTTTTTAGGTAAAAAGAGGTTTG
AATTCTGGTCATTGCCGCGTACTCTCGTGTAGATTCTACCACAAATggat
taaagatttaaaaggACACCTCGGGCGCGCTCATAATATGACGTTggtat
ctcataaaaaattacCTCCGTCTCAGCTCAGTAGTGTCGTACAGAAAAAT
AAGGGTAAATATCATATGAAAAGTAGGAAAATTGAGCTATGTAGCCTAAA
GGGGTGTATACACTATATGCAACCTCAAACGGATCTTACCCGACATTTAA
AAAACTGTCACGCTGGTATGACGAAGAGGGAATATTATGCTAAAAGGTAC
TATCAAATTAAGTTTATGAACGTCTGACCATCTCGTTTCTTTTTAATCGG
CCTATGAACCCTATGAAGGCAAAAGTGGGCGGGGTATGAGGTAAAAGGGG
TGACCTGATCTTTCATGGGGGCTGCAGGAttttaagatttatttttttaa
actggTCACAATCCATTTTACCTTCAGTATTTAGATATTTGCCATTTGTA
TTTTTAATTCATTATAAGCCATAGTGTCTAGGTATTTAGTACCTCATAAT
GTATACATGTTTTTTCTTTTATAAGCAtaacgtttataagcatatgcagg
ctcagtttttggtacctaaacaatggctctattgtttgagaacaatagaa
tgctaagcataatgcgagcctgatgtaggggcagtcacttgcttataaaa
aaaaacatgtatttgaataaatgagaaagatttttaagcattcATTGAAC
TTTAATGTATGACAACAGCCTTTGATGGTTAAAGCCGAGAAAGTCTGGGG
GGGGCTATCATGAATCGAATTTTCTGGAGGGCGCTAAGTGAAAAGGGGGA
GCTGAATTTTCTGGGGAATTTGTTTATAACTCGTTTAAAATCTTTAAGCA
TCGTTATTCATTTGTCTTGTTTAGCAAACCAGATGTATGCATAGAAGACC
AACCGTTTTCAAGCTGCTCACAAAGCCAATCATTGGGTCCAGCCGTAACT
GAGTTAGATATATTTGGAAAAGGTATGACAATTCGATCTTTAATGATTGG
CACAAAAACTTATGCTGAAATAAACTGGGCAGAACTCGTAGACTAGAAAA
ATAGTCGTTAAAATCAGGTCCCAATACGACAAAATTCAagctcaaaagaa
aaagaattgtaTACCCTGGACTAGTCTCGTCTTCTTCTTAGTTTTTGGCT
AAATTTCAGGCCAAATTCTTatagaaattcaaattctcGTGTAAAACCGT
GTATTGAAATACTTAAATCATTTCAGAGTGTAACACCGACATATCACTCT
GAGGAATTCTTTTGAAGCctgaaaaatcctatttttttcCAGAAATGTTT
TTCCTTTATTGATTATAGATGCTAGCGATAGCGAGAAAGTGAATCAAAAT
CTCACAAGTGATGAAGAAAGCGATGGCGAAAGAAGTGTTCTCGACTCTGA
TGTATCACTTTCTTCGCCTTTTTATCCTGGAATCATTAGTCCAAGTCCTA
AAAAAGGTTTGTTAAATATTCCGCTTCTGTATTCTTTCACTTCAACGTAG
AATGCATTAGGCGTGCAAGTTATCGCGAGCAGAAAGTTTTGCGAGGTCGA
AATTTATgacatttacttttgcgaaaaaggccaatttttgaaaatcgcga
aagtttctgctcgcgaaagtttgtataATTAAAGCTGATTAAAGTAAAAC
CTTTGGTTGCTTTTCTCGAACATAAATGATAGATAGCATAAATAGGTCTC
ACTCTATTTTGATTTGCTTGATGTGATTAATGCCAATGATGTATCCTTTT
CCTACCgatattttaaaaacatacgTGTACgtacaaaaaaagtttcaaaa
tgatACATGTTAGATTTAGATTTAATATTTAAACCATATCAATACTACAA
GTTTGGTGTTATGTGTCGACACATAACATCAATGATGTAAAACAAAGtac
ttatttttttctaaaatgcaGGCCTCCCTGTTATGTGATGTTATTAGACC
CTGTTATTAGACCCTCCCCAACAACAACACTAAAAGAGTATCAAACGTAC
TCTCTTTTCCGTTGTTTCAAGGAAGCTGACTTTTgtaatctttatttttt
cattcgaCAGATCTGGATATCACACGAGTTCGAAGAGTCATACTACCGGA
ATTATGATAAAGAGTTTTATATACACAAACATTTTATATCTTTACGAAAA
AGAAACAATTTCTGAAATAACACGCTGTTAGtctctttaaaacttttgat
catggtgtaatttattttcataattgTGTACATCACGTCGATCCATTTTG
GGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040202TCONS_00040202Clytia hemisphaericatranscript
TCONS_00040203TCONS_00040203Clytia hemisphaericatranscript
TCONS_00040204TCONS_00040204Clytia hemisphaericatranscript
TCONS_00040205TCONS_00040205Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040202-proteinTCONS_00040202-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002351supercontigsc0002351:442..4895 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
235.42	343.45	621.96	691.07	329.57	3098.67	805.46	205.45	230.95	356.25	1062.52	294.79	214.35	363.98	340.63	179.17	952.64	268.35	1052.1	117.09	180.75	220.54	248.19	186.8	369.18	327.32	376.82	712.65	219.04	299.98