XLOC_024137 (gene) - C. hemisphaerica

Overview
NameXLOC_024137
Unique NameXLOC_024137
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002229:11513..15228-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024137 ID=XLOC_024137|Name=XLOC_024137|organism=Clytia hemisphaerica|type=gene|length=3716bp|location=Sequence derived from alignment at sc0002229:11513..15228- (Clytia hemisphaerica)
CAAATTTTCTCATGAAAATTGAAAAACTCCTAGTAAATTGAAGGAAAATA
GTAAAAAAAAATCAAGGTTATATTGCGCAAGCTGTCTTGCAAAAATTAAT
ACAAAAGGAATCAAATTGATTTTAAAAAATGTTTTATTTCAGCGTTCTTA
CTGCTCTCCTACTGTGGAATGTATCTTCTGTGGGGACTTTGTCGAGCTTC
TATTGTTACAGGAACATACCAAAATCTGCTCTAAGGTAACTTTTTTAAAC
TTTTGAATAAAGAGCTTTTTAATTTGATAATAAAAGTTACAGGGGTTTCA
TTAAAACATGGTACCATAGGGTACCCTGATATGGTAGACCTTCTGGTATA
CCCTGCCCTGAAAAAAGTTTGGAGTCAATGAAAAATATATAAAGTCACAA
TTAAATGGTGATGGTTTTGTGCTTGTTGAAAAAATAACTTTGACTTGAGA
AATCTCACTTGAAAAAAGGTTAAAATCCCTTATTTAATTTCTCACCAATA
GCTCCTGAAATATTTCTTTTCTCAAGTTATTCAACCTATGCCATTAAAAC
CTTGTCATCTTTGATCCACTGGGAGAGGATAATTTGACATTTTTTCCCTT
TAGGAAGTTTANTCACTTGAAAAAAGGTTAAAAATCCCTTATTTAATTTC
TCACCAATAGCTCCTGAAATATGCCATTAAAACCTTTTCATCTTTGATCC
ACTGGGAGAAGATAATTTGACATTTTTTCCCTTTAGGAAGTTTAATTTTC
TTATGTCAAACTGTTTTCATTCATTATTTTATGTTATTTTTCTTATTCGT
TAGAACCCTGGAAATGAACAGAAGGAGAATGGGCAGAATGATAAAGAGTG
AGAGTTATGAGATTTTATTTGATTTAGATAAAGTTAGATTCACTCTGTCT
CTTGGATATGCTTCTTTTATTTCTACTCTGCTTGTTGCTTTATTTTCACC
TATATCAGGTAGGTCCGTACATGTATCAACTTATTAAATGATAAGTTAAT
GTTTTCATTCTTCAGATAAGATTCTTTTTTAAGTATGAAACACAATCCAA
TTCAAATTAGACTTTATGCCGAAAGTTATTTTTATTTTCTCTTTAATTTT
AGAACTAGTCAATCATCAACTTCAACAAGGACAAGTTCATTTGTAAATAC
TCACACAAGAAATGATGCACCAGTGTAAGTTTTAAGTTTTTTTGATAGAT
GATATTATTTACTTTTAGCCAGATTGATTCCTCATTTTGTTGTTTTTATG
AACCTAAACTGTAAAGTTGGGTGAGCTGATCAAATTTTTAGGATTTGCCC
CCAATTTCTTTCATCTATTAAAATTGAGGATTTCAAACCCCCCACCTGCA
TTCAAGAGTGACCTTTTGATTAGGGAAGCACTATGATGACAAATTAGTTT
TTCTTTTTTCTCAAAAAAGGCCCTTTTTTCAAGAACAAGCAGAATCCAAT
TTAATCTAGGCTTTATGCCAAAAGTTATTTTTATTTTCTCTTTAATTTCA
GAACTAGTCAATCATCAACATCAACTTCAACAAGGACAAGTTCATTTGTA
AATACTCACACAAGAAATGATGCACCAGTGTAAGCTTTAAGTTTTTTTGA
TAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTTCTCTTTAATTTTAGAACTAGTCAATCATCA
ACATCAACTTCAACAAGGACAAGTTCATTTGTAAATACTCACACAAGAAA
TGATGCACCAGTGTAAGCTTTAAGTTTTTTTGATAGATGATATTATTTAC
TTTTAGCCAGATTGATTCCTCATTTTGTTGTTTTAATGAACCTAAACTGT
AAAGTACGGTAAGCTGGTCAGCTGGCAAAAAGATATCTGAACATTTCAGG
TGTTTATTTATTAGTGAGGACCACTTTGTTCCAAAAACATCCTTCGTGTG
TACAGTTTTGTTAGATGCAAACTAATTTAGTTAGTTGTTGATTTTAATCC
ATTTTCCTTCAACTTGTTCCAACGCGATGTCATAACTTGATATTGAAAAT
TATTAGAGGATGGGGCTTAATTGGGGGAAATACGGTAAGGCCTAAATGAA
TTTTGTTTTCATAAGGATCCCATCAGCAATTGTGTTGTTGACTCAAAAAC
ATTAGGTTCATTTGAAAGAGGACCTTGTGAACAAAAAGAATATTATTACG
AAAAACTAGCCTAGTTAAAAACAATAAGTATCATGCCAAATTTGCATTCA
TTTAATTTTTAGAGCCATGCCATTACAACCAAGGATTTCAACTGGTACCC
AACCAAGCTCAGAAATTATGGATATAACTTCAACTTTGTAGGTTGATCAT
TGGTGGTTACACCCCGTTTTATTTAAATTTCTGGAATCCTTTGGTAACGT
AACTAAAAAGAAGAGAATTTGAAAATTTTGATACGGTGGTTGTCTGTACG
AGGAACAATTATGAAAGGAATGTTTAGATTGAAGCCTTCAATATAAAGTG
TCTATTTTACATAACCCACTCAACATTTTACTGAGTTGTCTAGAATTTAC
AGCTGAAGATAAGCCTTTAAAACTGTAATCGCCATTTTAGATCTGTGTTC
TCAAGAAATACAGGTCAGACTGGTTCTCAGCAACATTCTGTTTCTGCTTC
CTTGCCAGTACTAACTGCGTGGTAAGGGGAGGATGAAGGCAAATCATCAT
TCAATACCAGCGCCTAGCCCCTCCCATCAAGAAACGACTGCGCACTTACA
CTTATATAAAATTTAATTTTTCTTTTAGCTCAATGGCTGCTGATACGGAT
GATGTCATCACCTCAGGACTCGCAGACTCAGTGTCCAAATATAACGCTAT
GTAAGACTAAAATATTTCAATAATAGTGCTCTGTATTGGTAAAATATGTT
TACAATTTCAACCCCATATGAAATTACCCAACCCTAATCAACCTACTTTT
TTTCTTTTTACTTTTTTCATAATAGTGAGGTGGTGAAAACATGATTTTCG
GTGGAAATCTTTTTAGCAAATTTAGACGAAGAACTGCTTAACAATTTGGT
TTTTTTCGACTGGTTTTTTTTATCATTTTTGTAAATGGTCCTTTAAAAAT
GCCATTGTGAAAACGATTTTTTCCAAAAGAATCTTTTGGGCTCAAAAAAT
TATTTTTAGCCATAAGGAAGGATCAAAGCATAAATCATAGTAGGCTACGA
TGCATAAATCAATGTTGGGTCTTAACTGAATTATTTCTAATTTGCATGAG
ATGGATCAATTTTACTAATGAAATTGTATTTCTACAAATTATGTGAGTTG
TTTGGTTTGAAATTTTCTGATTTGCTTTGCTTTCATTTTCATTTCCCTTC
CAAATTTACCATTATATTACCTTTTTTCCATAGGAAAGCAACTGTAAAGG
AATGGGAAAAGTGTGATATCTGTGAGGAGGTTATCGAAGACTCTCCCTCT
CATATGATGCGTTGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039883TCONS_00039883Clytia hemisphaericatranscript
TCONS_00039882TCONS_00039882Clytia hemisphaericatranscript
TCONS_00039881TCONS_00039881Clytia hemisphaericatranscript
TCONS_00039880TCONS_00039880Clytia hemisphaericatranscript
TCONS_00039879TCONS_00039879Clytia hemisphaericatranscript
TCONS_00039878TCONS_00039878Clytia hemisphaericatranscript
TCONS_00039877TCONS_00039877Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039881-proteinTCONS_00039881-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002229supercontigsc0002229:11513..15228 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.45	2.48	0.52	0	9.74	5.31	4.45	4.68	2.98	5.82	3.48	4.45	1.99	0.76	3.6	4.37	2.85	1.92	1.61	1.68	1.29	2.17	1.03	1.94	3.48	3.67	0.48	0.33	1.52	1.47