XLOC_022812 (gene) - C. hemisphaerica

Overview
NameXLOC_022812
Unique NameXLOC_022812
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001790:13733..17117-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022812 ID=XLOC_022812|Name=XLOC_022812|organism=Clytia hemisphaerica|type=gene|length=3385bp|location=Sequence derived from alignment at sc0001790:13733..17117- (Clytia hemisphaerica)
CAAAGATTCTTTAAAAAGAGGGATATATAAAATAACGATTTTACCATAAA
TGACAGGCTTAGACCTGGCTGCATTTTTTGCAATATAATGTACTGGTACT
GTTAGTTTTACTATATACTATATTTTCAAGCGTATTGAACACTGGATCTC
CCACTACTGGAACTTCATTAATTTCAACCATTGGATCTGAATTTGATAGC
CAGTAAGTTAATTTTTATCATCCATCGTGATATTTGTCTCGCTGAATCTG
AAACAGTTGTAATGGCAAGTTTAGACCTGGCTTCACTCTATGTTATATTA
TGTATTGGCGGTACTGAGAGTTTTACTATATTTTCCAGTGCATCAAACAC
TGGATCTCCCACTACTGGAACTTCATTAATTTCAATTATTGGATCTGAAT
TTGATAGCCAGTAAGTTGTTTTATCATCCATCGTAATCTTTGTCTCACTG
AATCTGAAACAGTTGTAATGGCAAGTTTAGACCTGGCTTCACTCTATGTT
ATATTATGTACTGGTAAGACTGAGAGTTTTACTATATTTTCCAGCGTATC
GAACACTGTATCTACTGGAACTTCATTAATTTCAACCATTGGATCTGAAT
TTGATAGCCAGTAAGTTAATTTTTTACAATCCCATGTTTTATCATCCATT
ATGATATCTGACTGACTCAATTTAAAGCGGGACTCGGGTGGGATATTTTT
TCTACCCCCTAGCCTAAGGGTTTTGTAAGGAGAATCTTTTTACTTAAGGG
GGGTCTCGACCTCCATAAAACTTTTGGGATATGAAACAATCATAAATGAC
AGGTTTAGACCACACTTCACTTGTGCTTTATTACGTTACTGGTACTGACC
TGGCTTCACTCTATGTTATATTATGTACTGGTAAGACTGAGAATTTTACT
ATATTTTCCAGCGTATTGAACACTGGATCTCCCACTACTGGAACTTCATT
TACTTCAACCATTGGATCTGAATTTGATAGCCAGTAAGTTAATTTTTATG
GTTTGTTTCACTGGGAAAGACCTACTCTGTACTTTGTACCAAAGCCTGAC
GGAACAAGGGGTCATGTCAGGATACCAATTCAGGGCCCCAAAACATGACT
TCGAGATTTGAAAGTAGTAGACACCACCCCCTTAATTTTGTATCGATACC
AACTTGAAAATATAAATTTTCTAAAAAAAGTTACTAACACCCCTGTTGTG
CACACTTTTGTAATTGCGCAGGCACTTAATTACAAAACTGCGCAGCTCAA
AAACAACAAAAGTGCGCAGAAAAATTACAAAAGTGCGCAAAAATTACAAA
GCTGCGCAAAAAAATTACAAAAGTGCGCAGAAATTACAAAAGTGCGCACA
ACACCCCTAAATTAGTATCGATACCAACATGGGAAATCCAAGTTTAAATA
GGGAAAACCGTTTACTTTGATTATCTTGCAGGACAAAAGACACGCTTGAT
GGGGATTTGATTTGTCCAATTTGTCGGAAAGGAATATACATACCAGTAAC
GAAAGTGACAAATTGTGAATGTAAATACCATTACAGCTGTGTCGAGGGGG
AATTGATGTTTGTAAACAATTTTCTGTGCCCAGGCTGTAATAAAAAAGTC
TTTAGAATAGGAGAAGAAGATATGTCTGAAAAATTTGTCAACGAGTTGTT
GAATGAGCTGTGCGATTTGAATTGTCATGATCCAGTTGAAATGCTAAGGT
TTTTACAATCCAAATTAGTTAAAGGTCGTCAATTGTTCATCCCAGACATC
ACACAGTACGAACCCAAAGGGGACGATTCGGTGAATTACATTGCTGTTGA
CAGGCAATCAATCATTAATTCCACTTTTGTGGAGTTTGAGGAGATTGATG
ATTTCAAACTCACATTCGAGGTTGATTTCATAGGAGAAANATGGAGTTTG
AGGAGATAGATGATTTCAAACTCACATTCGAGGTTGATTTCATAGGAGAA
ACCGCTAAAGACAACGGTGGGGTCCGCATGGAATGGACCGGCTTAATCAA
CAGAGCAATCTTTGAAAAGTACTTCGAAAATGGTCTAAAGGCGCATCTTA
GCAAGGACTATTTTTTGGTTGGTGTATTGGTTGGAATATCGCTCATTCAG
GGTGGCATTTCACCAAAGTTCTTTAAGGAAGAACAGCTGGAAGTGATATT
TCATCATTCTGAGAAGGCTACGGAACCAATGAAACAACTGATCAGAGGTC
TGGAGGTGTTCCACCTCCATACCGTCTTTCAAAAATTTCCCATGTTGGCC
CACCTTTTCAGGAAGTCTGACTTCCAACTGAGCCCAAGATATTTGATGAA
TCTCATCCAAACGGACTTTAAACCTAATGGATCACCCAGGGAAAAGAACA
TATACTCGTACTTCGTCAAATATTTGAGAGAAGTTGCCGCAAAGCGAAGA
GGCGAAATAACCCTTGGACATGTACTGCGTTTTATAACCGGTTGCAGTGA
AGTGCCAGAGTTGGGCTTTGCTGTNGATTTGGTCACCCAGGGAAAAGAAC
ATATACTCGTACTTCGTCAAATATTTGAGAGAAGTTGCCGCAAAGCGAAG
AGGCGAAATAACCCTTGGACATGTACTGCGTTTTATAACCGGTTGCAGTG
AAGTGCCAGAGTTGGGCTTTGCTGTGCCACTGAAAATGATATTTGTTGAC
TCTACAGTTACATATAAAATTATCAAGGTAAATTATTATATTGCTCAAAG
AGATACTGGAGGTCAAAATGCAGAATGCAAACCTTCTATAGTCTGGCGGT
GGTGTATTTTTTTTTCTCAATTTCTCAATTTGTAAAAATTAGTTAGGGGT
TGACCATCGTTCCCTGAATGAGAAAGATCAAAATTTAAAAGGTTTGAACC
ATGGAATTAATGTCTCATTGGCTACCAATATAAGAAAAGTCGTCATAATT
GAAAATTTTTTACCATTCGAAAAATCATGAAATAGTGATTAATGAAAGGC
TATATAATCTCGGGTATCTAATTGATGTATATCGTACATAGGTGTGTACA
TCAAATTAAATAGGTTTGATTTTTAGAAAAGTCTATTCATGAAGTTGAAA
GTGGAACAAAATTAGACGAACAAGGAGAAAAAGAAGTTAACGAGCAGACA
CGTGAGACACCACTAGAAAAGACGAAGGATGAAGACAAAGAGGAAAATGT
TGAGGAGAAGACTGATGAATCGACGCCAGAAGACGAGAATGGTGAAGAGA
TAAAGGTGAAGGTCATCGATTACACGCCTAAAGCGCACATTTGCGCCAAC
CAGATAGAAATGCCGCGTGGCTTATTGGATGAAGAACTGCCACCCTTGGA
AAAGATTTTAAAGATTTACGACTACGCATTTGCCAATGCATTTTTTGGAA
ATTATTAGAACAGTCGCGAAACTTTATAACAACAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038178TCONS_00038178Clytia hemisphaericatranscript
TCONS_00038177TCONS_00038177Clytia hemisphaericatranscript
TCONS_00038176TCONS_00038176Clytia hemisphaericatranscript
TCONS_00038175TCONS_00038175Clytia hemisphaericatranscript
TCONS_00038174TCONS_00038174Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038178-proteinTCONS_00038178-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001790supercontigsc0001790:13733..17117 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05	0	0	0	3.15	3.15	2.74	4.49	2.07	2.6	1.7	1.85	2.28	1.33	0.05	0.07	0	0.01	0	0	0	0	0.02	0	1.88	3.02	0	0.03	0	0.02