XLOC_022030 (gene) - C. hemisphaerica

Overview
NameXLOC_022030
Unique NameXLOC_022030
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001592:57679..61921+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022030 ID=XLOC_022030|Name=XLOC_022030|organism=Clytia hemisphaerica|type=gene|length=4243bp|location=Sequence derived from alignment at sc0001592:57679..61921+ (Clytia hemisphaerica)
GAGATGCATGCGCTATTCAGCCTTTATATTCTgttcaaaaaattgagaaa
atcctCGCTCTTGCATTCACTCAAAGAAGTTAACTCATGCAAATTCAAAC
AATTTCGTTTTCTATTTCATGCACTTATCTGGACCAACGATCAACCACCA
AGGAATACAATAGAATATACTAAAAGACGATCGATTACCAAAACAAACGC
CGGTCATTGGAGATTGACGCTCTTATCAACATTCACCACCGACAACTTAT
TATCAAACATGGAATCATGGATGTGTTTTATTAAGTTGATGAATTTGGTA
TTCCTTAAACGAAAATTACAAAtagattgataacattttgaAGCTATGAA
GCTCATACCTCGTAAAAACCCATTATAACNCGAAAATTACAAAtagattg
ataacattttgaAGCTATGAAGCTCATACCTCGTAAAAACCcattataat
aattataatttaaatttatgaTCTCTTACATTTGACGGTCAAACACTTGC
AGATGGAATAATTTCGTTAGTAAAATATTTGTACATAAAGGGGAGAAGAC
CTTTAACCTCCGAAGGTCGGGGTGACGGATGCCATTGGTTCGGAGATAAT
GTTTCCTCCAGAATAAACAGCCACTGGGGGTTTTACGCTACACGCTTCGT
CACAAAAATTCAATTGTATTTTATTTGAGCTTATCCAACTTGTAATTTAC
TACTAattttgttaaacattttttttaccacGAGTGTTAATGCAAGCAaa
taccaatgaaaaagtaactttattgttttctatttttctgtTCATTTCGA
AAAGGAAAAATAGTCGAGAAATAAAACTCTCGGAAGAATCCCTAAAGGAA
CTACAATGGTGGGTGAACAACATAACATTGAGCCAGGGAGCTCCAATGAA
ACTGGGGAATCCAGACTTAGTGATCCACACCGATGCCTCGTCGGAAGAAG
GTTGGGGAGCTTCCCTAGAGGGGGGGAGATCAACAGGGGGAGTGTGGACG
AAAGAGGAGAAGGAGAACCACCACATAAACGAGTTAGAACTCATAGCAGC
AGAGTTAGCTCTGAAAACTTTTTTGAAGGACAGGAAGCCCAGGTTAGTAC
ATATATTCATGGACAACATGACAGCATTACACTACCTAATACACAAAGGG
GGGaccaaatcgaaaaaaataacaactATAGCCAAAAGGATTTGtagtag
gggccactatgtcttcccgtgtgcagaAGCTTGTGCGGAGGgtttttatg
attgaatattgttccttgaatgtagaagatcaaaatttgagaggtggggc
cgggtgtgaccacccgttgccatggaaactgacgtcataggttactatgg
caaccaaaattaaaagtcgtcaaaattgaaaattttttgttcaattcgaa
agagcatgaaaaactgataaagaaaaaggtcacaacctatatctgaaaat
gaatatatcaggagatattgaggaaataaggcaaaatgacgtcataaaac
gatgacgtcatcggaaaataaaaatttgtcaaaattcgaaaatttttggt
tttttggaaagaagaccctccagtgaacataaaatattattacgaaaaag
tctgaaaatcctttttcaGAAGTCTATTAGCCAAAattgagattttaaaa
ttttgcctgTCGAAGGTTGGAGCTTGGGGTACGCACAGCCAGCACATTTA
caggcaaaattttaaaatgtcaattttggctaatagacttcttaaaaagg
attttcagactttttcgtgaTATGATTTTATGTTCACTGGAAGgtcttct
ttccaaaaaaacaaaaattttcgaattttgacaaatttttatttttcgat
gacgtcatcgtttcatgacgtcattttggcttatttccttaatatctcct
gatatattcattttcagatataggttgtgacctttttctttatcagtttt
tcatgctctttgGAATGGAACAAACATTTTTCAATTTTGATGACTTTTTA
TTttggttgccatagtaaccaatgacgtcagtttccatggcaacgggtgg
tcacacccggccccacctctcaaattttgatcttctacattcaaggaaca
atattcaatcataaaatccctttgcacaagctgctgcacacgggaagctt
tttcgcgacatagtggccTTTACTATTGGGAATTTCTCAACGAGAATGGG
ACCATGATTACTGCGTCCTGGATCCcatcaaaagaaaacaaaatagcGGA
TTGGAGGTCAAGACAAAAAGCAAACTCCAGCGAGTGGGAGCTATCAAACC
AAATATTTTGGAAACTAACAAATTTATGGGGATTACCGGAAATAGATTGC
TTTGCATCAAGGATAATGAGAAAACTACCTCTTTACATGTCCCTAAATCC
AGACCCAGAGTCGTTAGCAACAAATTCTCTTTACCAGAACTGGGGAAAAT
ACCCTTACCTGTTTCCACCCTTTTGCCTAATGGGCAGGGTTTTAAAGATC
ATCAAGAAACAATCAACTCCAAAAGCGCTAGTAATAGCTCCGCTTTGGCC
AGGACAACCTTGGTTTCCAGTGTTGCTATCAATGTTGATAGCAGAACCTG
TCCTGTTACCTCAGAAAAGAAACATACTTCTGAATCACATGCAAAAACCA
CACCCGTTAGTCTTAAACCACACCCTACAACTTGCGGCGTTTCTAGTATC
CGGGAACAGTTACAGAAGCAAGGCTTTTCAGAATCAGCTTCCTCAATCAT
GGTCCAGGCAAGACGCGAAAGCACAACTTGTGCTTACAAAACGCCTTGGA
GAAAGTGGGTTCTGTGGTGTGGCGGGAAACAGGTGGATCCCTTTGAAGCA
CCTGTAAACGTGGTAGTTGAGTTTCTCACAGAACTTTACCATGAAGGATA
TGAATACAGAACTATTAATGTGTATCGATCAGCCATATCTGCCTATCATC
ATCCTGTGAACGGGATCAGGGTAGGACAGACTAAAGAAGTTTGTCTATTG
TTGTCTGGGATAGACAATCTAAGACCCCCGACCCCAAAGTATAATGTAAT
CTGGGAGGTTGAGGACGTCTTGAACTGTTTGAGAGACTTAGGAAAGGACC
AAGAGTTGACTAATAAGGATTTGACTTTAAAAACAGTTATGCTGATGGCC
TTAACTGCCATTAAGAGATGTTCAGACCTTCACATTTTTGACACAAGATA
CATGGCAGTTGGAGAAAATAAAATAGTTTTTAAACTTAGTCAGAAACCAA
AAGGTTTTAGGAAAAAAGGGAAGAGTCCAAAACCGGTGTGCTTTATTGCG
TCAGGGGTTAGACTATGCCCAGTCTCCACCATCAAAAGTTACATAGACAG
AACTAAAGCGTGGAGAGAAGAGAATGGAGAAACAAGATTTTTTCTCAGTT
TTGTCAATCCACATAAGGGTGTCACCTCTAGCACTATTGGGAGATGGTTA
AAAACAGTCTTAGGTAACGTTGGGGTAGACATCTCAAAATTTACAGCACA
TTCTACTAGATCTGCAGCCTCCTCTAAACTCAAGGTATTGGGAGCCTCAG
TGTCGGAAATAATGAATTGTGGGAATTGGAGCAGTGCTTCAACATGGCAA
ACTTTTTATCATAAACCTATTCTTAGCAATCTTGAACAGGCTCAGAAGGA
GATGTTAAAATGAGCTTTGAACAAGGAAGGGCACTGGCCGAACGCGGCCT
TTTGGCCACTTTTCGGATCCCATGGTCGCACCATAAAATCTTGCAAGATT
TTTTGATGTAAAATTCGAGAATTTTATAAGCGCGACGCGAAGCGTCGCGC
GAAATGAAATTTAGATTTTACATCAGAAAATCTAAGAGAATTTATGGTGC
CTCGCCCTCCCTCCCTGTTGACATAAATTCTTATCATCTGATTCTATCAT
ATTTTTCAGGATGGAACGGTCGCGGAAGAGGACGCGGTTTCAATTAATTT
TTATTAAAGAAATAAAACGATTAACCCTGTACGGGTCAAAAACATATTTA
TTGTCTCAGATTTCTTTTGTGAATCATTTTATAGCGATTTAGATTTAGTT
AAAACTTGTTTCGATCACTCAGGACAATTTTCGGCATTATTCTTTATTAT
AAAACTCTAGATTAAAACCTAACGTAATCTTTATCCATTGTGCTGGTCGG
TTAGTTAGGCCTTTTCGGAACCATGTTCGCACCATAAATTCTCTTAGATT
TTCTGAtgtaaaatctaaatttcattTCGCGCGACGCTTCGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037226TCONS_00037226Clytia hemisphaericatranscript
TCONS_00037227TCONS_00037227Clytia hemisphaericatranscript
TCONS_00037228TCONS_00037228Clytia hemisphaericatranscript
TCONS_00037229TCONS_00037229Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00037227-proteinTCONS_00037227-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001592supercontigsc0001592:57679..61921 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.96	0.95	0.87	0.92	5.06	3.59	3.74	4.09	2.32	3.93	3.95	2.49	4.52	4.36	2.21	2.8	3.64	2.77	2.9	2.85	3.36	3.43	1.83	2.29	3.71	4.31	3.98	3.35	2.12	1.93