TCONS_00037227 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037227
Unique NameTCONS_00037227
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2083

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037227 ID=TCONS_00037227|Name=TCONS_00037227|organism=Clytia hemisphaerica|type=transcript|length=2083bp
cGAGTGTTAATGCAAGCAaataccaatgaaaaagtaactttattgttttc
tatttttctgtTCATTTCGAAAAGGAAAAATAGTCGAGAAATAAAACTCT
CGGAAGAATCCCTAAAGGAACTACAATGGTGGGTGAACAACATAACATTG
AGCCAGGGAGCTCCAATGAAACTGGGGAATCCAGACTTAGTGATCCACAC
CGATGCCTCGTCGGAAGAAGGTTGGGGAGCTTCCCTAGAGGGGGGGAGAT
CAACAGGGGGAGTGTGGACGAAAGAGGAGAAGGAGAACCACCACATAAAC
GAGTTAGAACTCATAGCAGCAGAGTTAGCTCTGAAAACTTTTTTGAAGGA
CAGGAAGCCCAGGTTAGTACATATATTCATGGACAACATGACAGCATTAC
ACTACCTAATACACAAAGGGGGGaccaaatcgaaaaaaataacaactATA
GCCAAAAGGTATTGGGAATTTCTCAACGAGAATGGGACCATGATTACTGC
GTCCTGGATCCcatcaaaagaaaacaaaatagcGGATTGGAGGTCAAGAC
AAAAAGCAAACTCCAGCGAGTGGGAGCTATCAAACCAAATATTTTGGAAA
CTAACAAATTTATGGGGATTACCGGAAATAGATTGCTTTGCATCAAGGAT
AATGAGAAAACTACCTCTTTACATGTCCCTAAATCCAGACCCAGAGTCGT
TAGCAACAAATTCTCTTTACCAGAACTGGGGAAAATACCCTTACCTGTTT
CCACCCTTTTGCCTAATGGGCAGGGTTTTAAAGATCATCAAGAAACAATC
AACTCCAAAAGCGCTAGTAATAGCTCCGCTTTGGCCAGGACAACCTTGGT
TTCCAGTGTTGCTATCAATGTTGATAGCAGAACCTGTCCTGTTACCTCAG
AAAAGAAACATACTTCTGAATCACATGCAAAAACCACACCCGTTAGTCTT
AAACCACACCCTACAACTTGCGGCGTTTCTAGTATCCGGGAACAGTTACA
GAAGCAAGGCTTTTCAGAATCAGCTTCCTCAATCATGGTCCAGGCAAGAC
GCGAAAGCACAACTTGTGCTTACAAAACGCCTTGGAGAAAGTGGGTTCTG
TGGTGTGGCGGGAAACAGGTGGATCCCTTTGAAGCACCTGTAAACGTGGT
AGTTGAGTTTCTCACAGAACTTTACCATGAAGGATATGAATACAGAACTA
TTAATGTGTATCGATCAGCCATATCTGCCTATCATCATCCTGTGAACGGG
ATCAGGGTAGGACAGACTAAAGAAGTTTGTCTATTGTTGTCTGGGATAGA
CAATCTAAGACCCCCGACCCCAAAGTATAATGTAATCTGGGAGGTTGAGG
ACGTCTTGAACTGTTTGAGAGACTTAGGAAAGGACCAAGAGTTGACTAAT
AAGGATTTGACTTTAAAAACAGTTATGCTGATGGCCTTAACTGCCATTAA
GAGATGTTCAGACCTTCACATTTTTGACACAAGATACATGGCAGTTGGAG
AAAATAAAATAGTTTTTAAACTTAGTCAGAAACCAAAAGGTTTTAGGAAA
AAAGGGAAGAGTCCAAAACCGGTGTGCTTTATTGCGTCAGGGGTTAGACT
ATGCCCAGTCTCCACCATCAAAAGTTACATAGACAGAACTAAAGCGTGGA
GAGAAGAGAATGGAGAAACAAGATTTTTTCTCAGTTTTGTCAATCCACAT
AAGGGTGTCACCTCTAGCACTATTGGGAGATGGTTAAAAACAGTCTTAGG
ATGGAACGGTCGCGGAAGAGGACGCGGTTTCAATTAATTTTTATTAAAGA
AATAAAACGATTAACCCTGTACGGGTCAAAAACATATTTATTGTCTCAGA
TTTCTTTTGTGAATCATTTTATAGCGATTTAGATTTAGTTAAAACTTGTT
TCGATCACTCAGGACAATTTTCGGCATTATTCTTTATTATAAAACTCTAG
ATTAAAACCTAACGTAATCTTTATCCATTGTGCTGGTCGGTTAGTTAGGC
CTTTTCGGAACCATGTTCGCACCATAAATTCTCTTAGATTTTCTGAtgta
aaatctaaatttcattTCGCGCGACGCTTCGCG
Run BLAST on NCBI

protein sequence of TCONS_00037227-protein

>TCONS_00037227-protein ID=TCONS_00037227-protein|Name=TCONS_00037227-protein|organism=Clytia hemisphaerica|type=polypeptide|length=553bp
MVGEQHNIEPGSSNETGESRLSDPHRCLVGRRLGSFPRGGEINRGSVDER
GEGEPPHKRVRTHSSRVSSENFFEGQEAQVSTYIHGQHDSITLPNTQRGD
QIEKNNNYSQKVLGISQREWDHDYCVLDPIKRKQNSGLEVKTKSKLQRVG
AIKPNILETNKFMGITGNRLLCIKDNEKTTSLHVPKSRPRVVSNKFSLPE
LGKIPLPVSTLLPNGQGFKDHQETINSKSASNSSALARTTLVSSVAINVD
SRTCPVTSEKKHTSESHAKTTPVSLKPHPTTCGVSSIREQLQKQGFSESA
SSIMVQARRESTTCAYKTPWRKWVLWCGGKQVDPFEAPVNVVVEFLTELY
HEGYEYRTINVYRSAISAYHHPVNGIRVGQTKEVCLLLSGIDNLRPPTPK
YNVIWEVEDVLNCLRDLGKDQELTNKDLTLKTVMLMALTAIKRCSDLHIF
DTRYMAVGENKIVFKLSQKPKGFRKKGKSPKPVCFIASGVRLCPVSTIKS
YIDRTKAWREENGETRFFLSFVNPHKGVTSSTIGRWLKTVLGWNGRGRGR
GFN
Run BLAST on NCBI

transcript from alignment at sc0001592:58409..61921+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037227 ID=TCONS_00037227|Name=TCONS_00037227|organism=Clytia hemisphaerica|type=transcript|length=3513bp|location=Sequence derived from alignment at sc0001592:58409..61921+ (Clytia hemisphaerica)
cGAGTGTTAATGCAAGCAaataccaatgaaaaagtaactttattgttttc tatttttctgtTCATTTCGAAAAGGAAAAATAGTCGAGAAATAAAACTCT CGGAAGAATCCCTAAAGGAACTACAATGGTGGGTGAACAACATAACATTG AGCCAGGGAGCTCCAATGAAACTGGGGAATCCAGACTTAGTGATCCACAC CGATGCCTCGTCGGAAGAAGGTTGGGGAGCTTCCCTAGAGGGGGGGAGAT CAACAGGGGGAGTGTGGACGAAAGAGGAGAAGGAGAACCACCACATAAAC GAGTTAGAACTCATAGCAGCAGAGTTAGCTCTGAAAACTTTTTTGAAGGA CAGGAAGCCCAGGTTAGTACATATATTCATGGACAACATGACAGCATTAC ACTACCTAATACACAAAGGGGGGaccaaatcgaaaaaaataacaactATA GCCAAAAGGATTTGtagtaggggccactatgtcttcccgtgtgcagaAGC TTGTGCGGAGGgtttttatgattgaatattgttccttgaatgtagaagat caaaatttgagaggtggggccgggtgtgaccacccgttgccatggaaact gacgtcataggttactatggcaaccaaaattaaaagtcgtcaaaattgaa aattttttgttcaattcgaaagagcatgaaaaactgataaagaaaaaggt cacaacctatatctgaaaatgaatatatcaggagatattgaggaaataag gcaaaatgacgtcataaaacgatgacgtcatcggaaaataaaaatttgtc aaaattcgaaaatttttggttttttggaaagaagaccctccagtgaacat aaaatattattacgaaaaagtctgaaaatcctttttcaGAAGTCTATTAG CCAAAattgagattttaaaattttgcctgTCGAAGGTTGGAGCTTGGGGT ACGCACAGCCAGCACATTTAcaggcaaaattttaaaatgtcaattttggc taatagacttcttaaaaaggattttcagactttttcgtgaTATGATTTTA TGTTCACTGGAAGgtcttctttccaaaaaaacaaaaattttcgaattttg acaaatttttatttttcgatgacgtcatcgtttcatgacgtcattttggc ttatttccttaatatctcctgatatattcattttcagatataggttgtga cctttttctttatcagtttttcatgctctttgGAATGGAACAAACATTTT TCAATTTTGATGACTTTTTATTttggttgccatagtaaccaatgacgtca gtttccatggcaacgggtggtcacacccggccccacctctcaaattttga tcttctacattcaaggaacaatattcaatcataaaatccctttgcacaag ctgctgcacacgggaagctttttcgcgacatagtggccTTTACTATTGGG AATTTCTCAACGAGAATGGGACCATGATTACTGCGTCCTGGATCCcatca aaagaaaacaaaatagcGGATTGGAGGTCAAGACAAAAAGCAAACTCCAG CGAGTGGGAGCTATCAAACCAAATATTTTGGAAACTAACAAATTTATGGG GATTACCGGAAATAGATTGCTTTGCATCAAGGATAATGAGAAAACTACCT CTTTACATGTCCCTAAATCCAGACCCAGAGTCGTTAGCAACAAATTCTCT TTACCAGAACTGGGGAAAATACCCTTACCTGTTTCCACCCTTTTGCCTAA TGGGCAGGGTTTTAAAGATCATCAAGAAACAATCAACTCCAAAAGCGCTA GTAATAGCTCCGCTTTGGCCAGGACAACCTTGGTTTCCAGTGTTGCTATC AATGTTGATAGCAGAACCTGTCCTGTTACCTCAGAAAAGAAACATACTTC TGAATCACATGCAAAAACCACACCCGTTAGTCTTAAACCACACCCTACAA CTTGCGGCGTTTCTAGTATCCGGGAACAGTTACAGAAGCAAGGCTTTTCA GAATCAGCTTCCTCAATCATGGTCCAGGCAAGACGCGAAAGCACAACTTG TGCTTACAAAACGCCTTGGAGAAAGTGGGTTCTGTGGTGTGGCGGGAAAC AGGTGGATCCCTTTGAAGCACCTGTAAACGTGGTAGTTGAGTTTCTCACA GAACTTTACCATGAAGGATATGAATACAGAACTATTAATGTGTATCGATC AGCCATATCTGCCTATCATCATCCTGTGAACGGGATCAGGGTAGGACAGA CTAAAGAAGTTTGTCTATTGTTGTCTGGGATAGACAATCTAAGACCCCCG ACCCCAAAGTATAATGTAATCTGGGAGGTTGAGGACGTCTTGAACTGTTT GAGAGACTTAGGAAAGGACCAAGAGTTGACTAATAAGGATTTGACTTTAA AAACAGTTATGCTGATGGCCTTAACTGCCATTAAGAGATGTTCAGACCTT CACATTTTTGACACAAGATACATGGCAGTTGGAGAAAATAAAATAGTTTT TAAACTTAGTCAGAAACCAAAAGGTTTTAGGAAAAAAGGGAAGAGTCCAA AACCGGTGTGCTTTATTGCGTCAGGGGTTAGACTATGCCCAGTCTCCACC ATCAAAAGTTACATAGACAGAACTAAAGCGTGGAGAGAAGAGAATGGAGA AACAAGATTTTTTCTCAGTTTTGTCAATCCACATAAGGGTGTCACCTCTA GCACTATTGGGAGATGGTTAAAAACAGTCTTAGGTAACGTTGGGGTAGAC ATCTCAAAATTTACAGCACATTCTACTAGATCTGCAGCCTCCTCTAAACT CAAGGTATTGGGAGCCTCAGTGTCGGAAATAATGAATTGTGGGAATTGGA GCAGTGCTTCAACATGGCAAACTTTTTATCATAAACCTATTCTTAGCAAT CTTGAACAGGCTCAGAAGGAGATGTTAAAATGAGCTTTGAACAAGGAAGG GCACTGGCCGAACGCGGCCTTTTGGCCACTTTTCGGATCCCATGGTCGCA CCATAAAATCTTGCAAGATTTTTTGATGTAAAATTCGAGAATTTTATAAG CGCGACGCGAAGCGTCGCGCGAAATGAAATTTAGATTTTACATCAGAAAA TCTAAGAGAATTTATGGTGCCTCGCCCTCCCTCCCTGTTGACATAAATTC TTATCATCTGATTCTATCATATTTTTCAGGATGGAACGGTCGCGGAAGAG GACGCGGTTTCAATTAATTTTTATTAAAGAAATAAAACGATTAACCCTGT ACGGGTCAAAAACATATTTATTGTCTCAGATTTCTTTTGTGAATCATTTT ATAGCGATTTAGATTTAGTTAAAACTTGTTTCGATCACTCAGGACAATTT TCGGCATTATTCTTTATTATAAAACTCTAGATTAAAACCTAACGTAATCT TTATCCATTGTGCTGGTCGGTTAGTTAGGCCTTTTCGGAACCATGTTCGC ACCATAAATTCTCTTAGATTTTCTGAtgtaaaatctaaatttcattTCGC GCGACGCTTCGCG

Coding sequence (CDS) from alignment at sc0001592:58409..61921+

>TCONS_00037227 ID=TCONS_00037227|Name=TCONS_00037227|organism=Clytia hemisphaerica|type=CDS|length=4986bp|location=Sequence derived from alignment at sc0001592:58409..61921+ (Clytia hemisphaerica)
ATGGTGGGTGAACAACATAACATTGAGCCAGGGAGCTCCAATGAAACTGG
GGAATCCAGACTTAGTGATCCACACCGATGCCTCGTCGGAAGAAGGTTGG
GGAGCTTCCCTAGAGGGGGGGAGATCAACAGGGGGAGTGTGGACGAAAGA
GGAGAAGGAGAACCACCACATAAACGAGTTAGAACTCATAGCAGCAGAGT
TAGCTCTGAAAACTTTTTTGAAGGACAGGAAGCCCAGGTTAGTACATATA
TTCATGGACAACATGACAGCATTACACTACCTAATACACAAAGGGGGGac
caaatcgaaaaaaataacaactATAGCCAAAAGGTATTGGGAATTTCTCA
ACGAGAATGGGACCATGATTACTGCGTCCTGGATCCcatcaaaagaaaac
aaaatagcGGATTGGAGGTCAAGACAAAAAGCAAACTCCAGCGAGTGGGA
GCTATCAAACCAAATATTTTGGAAACTAACAAATTTATGGGGATTACCGG
AAATAGATTGCTTTGCATCAAGGATAATGAGAAAACTACCTCTTTACATG
TCCCTAAATCCAGACCCAGAGTCGTTAGCAACAAATTCTCTTTACCAGAA
CTGGGGAAAATACCCTTACCTGTTTCCACCCTTTTGCCTAATGGGCAGGG
TTTTAAAGATCATCAAGAAACAATCAACTCCAAAAGCGCTAGTAATAGCT
CCGCTTTGGCCAGGACAACCTTGGTTTCCAGTGTTGCTATCAATGTTGAT
AGCAGAACCTGTCCTGTTACCTCAGAAAAGAAACATACTTCTGAATCACA
TGCAAAAACCACACCCGTTAGTCTTAAACCACACCCTACAACTTGCGGCG
TTTCTAGTATCCGGGAACAGTTACAGAAGCAAGGCTTTTCAGAATCAGCT
TCCTCAATCATGGTCCAGGCAAGACGCGAAAGCACAACTTGTGCTTACAA
AACGCCTTGGAGAAAGTGGGTTCTGTGGTGTGGCGGGAAACAGGTGGATC
CCTTTGAAGCACCTGTAAACGTGGTAGTTGAGTTTCTCACAGAACTTTAC
CATGAAGGATATGAATACAGAACTATTAATGTGTATCGATCAGCCATATC
TGCCTATCATCATCCTGTGAACGGGATCAGGGTAGGACAGACTAAAGAAG
TTTGTCTATTGTTGTCTGGGATAGACAATCTAAGACCCCCGACCCCAAAG
TATAATGTAATCTGGGAGGTTGAGGACGTCTTGAACTGTTTGAGAGACTT
AGGAAAGGACCAAGAGTTGACTAATAAGGATTTGACTTTAAAAACAGTTA
TGCTGATGGCCTTAACTGCCATTAAGAGATGTTCAGACCTTCACATTTTT
GACACAAGATACATGGCAGTTGGAGAAAATAAAATAGTTTTTAAACTTAG
TCAGAAACCAAAAGGTTTTAGGAAAAAAGGGAAGAGTCCAAAACCGGTGT
GCTTTATTGCGTCAGGGGTTAGACTATGCCCAGTCTCCACCATCAAAAGT
TACATAGACAGAACTAAAGCGTGGAGAGAAGAGAATGGAGAAACAAGATT
TTTTCTCAGTTTTGTCAATCCACATAAGGGTGTCACCTCTAGCACTATTG
GGAGATGGTTAAAAACAGTCTTAGGATGGAACGGTCGCGGAAGAGGACGC
GGTTTCAATTAAATGGTGGGTGAACAACATAACATTGAGCCAGGGAGCTC
CAATGAAACTGGGGAATCCAGACTTAGTGATCCACACCGATGCCTCGTCG
GAAGAAGGTTGGGGAGCTTCCCTAGAGGGGGGGAGATCAACAGGGGGAGT
GTGGACGAAAGAGGAGAAGGAGAACCACCACATAAACGAGTTAGAACTCA
TAGCAGCAGAGTTAGCTCTGAAAACTTTTTTGAAGGACAGGAAGCCCAGG
TTAGTACATATATTCATGGACAACATGACAGCATTACACTACCTAATACA
CAAAGGGGGGaccaaatcgaaaaaaataacaactATAGCCAAAAGGTATT
GGGAATTTCTCAACGAGAATGGGACCATGATTACTGCGTCCTGGATCCca
tcaaaagaaaacaaaatagcGGATTGGAGGTCAAGACAAAAAGCAAACTC
CAGCGAGTGGGAGCTATCAAACCAAATATTTTGGAAACTAACAAATTTAT
GGGGATTACCGGAAATAGATTGCTTTGCATCAAGGATAATGAGAAAACTA
CCTCTTTACATGTCCCTAAATCCAGACCCAGAGTCGTTAGCAACAAATTC
TCTTTACCAGAACTGGGGAAAATACCCTTACCTGTTTCCACCCTTTTGCC
TAATGGGCAGGGTTTTAAAGATCATCAAGAAACAATCAACTCCAAAAGCG
CTAGTAATAGCTCCGCTTTGGCCAGGACAACCTTGGTTTCCAGTGTTGCT
ATCAATGTTGATAGCAGAACCTGTCCTGTTACCTCAGAAAAGAAACATAC
TTCTGAATCACATGCAAAAACCACACCCGTTAGTCTTAAACCACACCCTA
CAACTTGCGGCGTTTCTAGTATCCGGGAACAGTTACAGAAGCAAGGCTTT
TCAGAATCAGCTTCCTCAATCATGGTCCAGGCAAGACGCGAAAGCACAAC
TTGTGCTTACAAAACGCCTTGGAGAAAGTGGGTTCTGTGGTGTGGCGGGA
AACAGGTGGATCCCTTTGAAGCACCTGTAAACGTGGTAGTTGAGTTTCTC
ACAGAACTTTACCATGAAGGATATGAATACAGAACTATTAATGTGTATCG
ATCAGCCATATCTGCCTATCATCATCCTGTGAACGGGATCAGGGTAGGAC
AGACTAAAGAAGTTTGTCTATTGTTGTCTGGGATAGACAATCTAAGACCC
CCGACCCCAAAGTATAATGTAATCTGGGAGGTTGAGGACGTCTTGAACTG
TTTGAGAGACTTAGGAAAGGACCAAGAGTTGACTAATAAGGATTTGACTT
TAAAAACAGTTATGCTGATGGCCTTAACTGCCATTAAGAGATGTTCAGAC
CTTCACATTTTTGACACAAGATACATGGCAGTTGGAGAAAATAAAATAGT
TTTTAAACTTAGTCAGAAACCAAAAGGTTTTAGGAAAAAAGGGAAGAGTC
CAAAACCGGTGTGCTTTATTGCGTCAGGGGTTAGACTATGCCCAGTCTCC
ACCATCAAAAGTTACATAGACAGAACTAAAGCGTGGAGAGAAGAGAATGG
AGAAACAAGATTTTTTCTCAGTTTTGTCAATCCACATAAGGGTGTCACCT
CTAGCACTATTGGGAGATGGTTAAAAACAGTCTTAGGATGGAACGGTCGC
GGAAGAGGACGCGGTTTCAATTAAATGGTGGGTGAACAACATAACATTGA
GCCAGGGAGCTCCAATGAAACTGGGGAATCCAGACTTAGTGATCCACACC
GATGCCTCGTCGGAAGAAGGTTGGGGAGCTTCCCTAGAGGGGGGGAGATC
AACAGGGGGAGTGTGGACGAAAGAGGAGAAGGAGAACCACCACATAAACG
AGTTAGAACTCATAGCAGCAGAGTTAGCTCTGAAAACTTTTTTGAAGGAC
AGGAAGCCCAGGTTAGTACATATATTCATGGACAACATGACAGCATTACA
CTACCTAATACACAAAGGGGGGaccaaatcgaaaaaaataacaactATAG
CCAAAAGGTATTGGGAATTTCTCAACGAGAATGGGACCATGATTACTGCG
TCCTGGATCCcatcaaaagaaaacaaaatagcGGATTGGAGGTCAAGACA
AAAAGCAAACTCCAGCGAGTGGGAGCTATCAAACCAAATATTTTGGAAAC
TAACAAATTTATGGGGATTACCGGAAATAGATTGCTTTGCATCAAGGATA
ATGAGAAAACTACCTCTTTACATGTCCCTAAATCCAGACCCAGAGTCGTT
AGCAACAAATTCTCTTTACCAGAACTGGGGAAAATACCCTTACCTGTTTC
CACCCTTTTGCCTAATGGGCAGGGTTTTAAAGATCATCAAGAAACAATCA
ACTCCAAAAGCGCTAGTAATAGCTCCGCTTTGGCCAGGACAACCTTGGTT
TCCAGTGTTGCTATCAATGTTGATAGCAGAACCTGTCCTGTTACCTCAGA
AAAGAAACATACTTCTGAATCACATGCAAAAACCACACCCGTTAGTCTTA
AACCACACCCTACAACTTGCGGCGTTTCTAGTATCCGGGAACAGTTACAG
AAGCAAGGCTTTTCAGAATCAGCTTCCTCAATCATGGTCCAGGCAAGACG
CGAAAGCACAACTTGTGCTTACAAAACGCCTTGGAGAAAGTGGGTTCTGT
GGTGTGGCGGGAAACAGGTGGATCCCTTTGAAGCACCTGTAAACGTGGTA
GTTGAGTTTCTCACAGAACTTTACCATGAAGGATATGAATACAGAACTAT
TAATGTGTATCGATCAGCCATATCTGCCTATCATCATCCTGTGAACGGGA
TCAGGGTAGGACAGACTAAAGAAGTTTGTCTATTGTTGTCTGGGATAGAC
AATCTAAGACCCCCGACCCCAAAGTATAATGTAATCTGGGAGGTTGAGGA
CGTCTTGAACTGTTTGAGAGACTTAGGAAAGGACCAAGAGTTGACTAATA
AGGATTTGACTTTAAAAACAGTTATGCTGATGGCCTTAACTGCCATTAAG
AGATGTTCAGACCTTCACATTTTTGACACAAGATACATGGCAGTTGGAGA
AAATAAAATAGTTTTTAAACTTAGTCAGAAACCAAAAGGTTTTAGGAAAA
AAGGGAAGAGTCCAAAACCGGTGTGCTTTATTGCGTCAGGGGTTAGACTA
TGCCCAGTCTCCACCATCAAAAGTTACATAGACAGAACTAAAGCGTGGAG
AGAAGAGAATGGAGAAACAAGATTTTTTCTCAGTTTTGTCAATCCACATA
AGGGTGTCACCTCTAGCACTATTGGGAGATGGTTAAAAACAGTCTTAGGA
TGGAACGGTCGCGGAAGAGGACGCGGTTTCAATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022030XLOC_022030Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037227-proteinTCONS_00037227-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037227-exon-sc0001592-1491911889:58409..58867TCONS_00037227-exon-sc0001592-1491911889:58409..58867Clytia hemisphaericaexon
TCONS_00037227-exon-sc0001592-1510915933:58409..58867TCONS_00037227-exon-sc0001592-1510915933:58409..58867Clytia hemisphaericaexon
TCONS_00037227-exon-sc0001592-1575043694:58409..58867TCONS_00037227-exon-sc0001592-1575043694:58409..58867Clytia hemisphaericaexon
TCONS_00037227-exon-sc0001592-1491911889:59852..61141TCONS_00037227-exon-sc0001592-1491911889:59852..61141Clytia hemisphaericaexon
TCONS_00037227-exon-sc0001592-1510915933:59852..61141TCONS_00037227-exon-sc0001592-1510915933:59852..61141Clytia hemisphaericaexon
TCONS_00037227-exon-sc0001592-1575043694:59852..61141TCONS_00037227-exon-sc0001592-1575043694:59852..61141Clytia hemisphaericaexon
TCONS_00037227-exon-sc0001592-1491911889:61588..61921TCONS_00037227-exon-sc0001592-1491911889:61588..61921Clytia hemisphaericaexon
TCONS_00037227-exon-sc0001592-1510915933:61588..61921TCONS_00037227-exon-sc0001592-1510915933:61588..61921Clytia hemisphaericaexon
TCONS_00037227-exon-sc0001592-1575043694:61588..61921TCONS_00037227-exon-sc0001592-1575043694:61588..61921Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001592supercontigsc0001592:58409..61921 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.661721 0.300287 0.0343349 0.424154 0 0 0.360137 0 0 0 0.00992012 0.21338 0.333988 0.61869 0 0.330149 1.12207 0.501948 0 0.260123 0 0.848118 3.04624e-05 0 0.884998 0.102905
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR023109Integrase_recombinase_N
IPR010998Integrase_Lambda-type_N
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037227 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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