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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037228 ID=TCONS_00037228|Name=TCONS_00037228|organism=Clytia hemisphaerica|type=transcript|length=2123bp
CACTGGAAGgtcttctttccaaaaaaacaaaaattttcgaattttgacaa
atttttatttttcgatgacgtcatcgtttcatgacgtcattttggcttat
ttccttaatatctcctgatatattcattttcagatataggttgtgacctt
tttctttatcagtttttcatgctctttgGAATGGAACAAACATTTTTCAA
TTTTGATGACTTTTTATTttggttgccatagtaaccaatgacgtcagttt
ccatggcaacgggtggtcacacccggccccacctctcaaattttgatctt
ctacattcaaggaacaatattcaatcataaaatccctttgcacaagctgc
tgcacacgggaagctttttcgcgacatagtggccTTTACTATTGGGAATT
TCTCAACGAGAATGGGACCATGATTACTGCGTCCTGGATCCcatcaaaag
aaaacaaaatagcGGATTGGAGGTCAAGACAAAAAGCAAACTCCAGCGAG
TGGGAGCTATCAAACCAAATATTTTGGAAACTAACAAATTTATGGGGATT
ACCGGAAATAGATTGCTTTGCATCAAGGATAATGAGAAAACTACCTCTTT
ACATGTCCCTAAATCCAGACCCAGAGTCGTTAGCAACAAATTCTCTTTAC
CAGAACTGGGGAAAATACCCTTACCTGTTTCCACCCTTTTGCCTAATGGG
CAGGGTTTTAAAGATCATCAAGAAACAATCAACTCCAAAAGCGCTAGTAA
TAGCTCCGCTTTGGCCAGGACAACCTTGGTTTCCAGTGTTGCTATCAATG
TTGATAGCAGAACCTGTCCTGTTACCTCAGAAAAGAAACATACTTCTGAA
TCACATGCAAAAACCACACCCGTTAGTCTTAAACCACACCCTACAACTTG
CGGCGTTTCTAGTATCCGGGAACAGTTACAGAAGCAAGGCTTTTCAGAAT
CAGCTTCCTCAATCATGGTCCAGGCAAGACGCGAAAGCACAACTTGTGCT
TACAAAACGCCTTGGAGAAAGTGGGTTCTGTGGTGTGGCGGGAAACAGGT
GGATCCCTTTGAAGCACCTGTAAACGTGGTAGTTGAGTTTCTCACAGAAC
TTTACCATGAAGGATATGAATACAGAACTATTAATGTGTATCGATCAGCC
ATATCTGCCTATCATCATCCTGTGAACGGGATCAGGGTAGGACAGACTAA
AGAAGTTTGTCTATTGTTGTCTGGGATAGACAATCTAAGACCCCCGACCC
CAAAGTATAATGTAATCTGGGAGGTTGAGGACGTCTTGAACTGTTTGAGA
GACTTAGGAAAGGACCAAGAGTTGACTAATAAGGATTTGACTTTAAAAAC
AGTTATGCTGATGGCCTTAACTGCCATTAAGAGATGTTCAGACCTTCACA
TTTTTGACACAAGATACATGGCAGTTGGAGAAAATAAAATAGTTTTTAAA
CTTAGTCAGAAACCAAAAGGTTTTAGGAAAAAAGGGAAGAGTCCAAAACC
GGTGTGCTTTATTGCGTCAGGGGTTAGACTATGCCCAGTCTCCACCATCA
AAAGTTACATAGACAGAACTAAAGCGTGGAGAGAAGAGAATGGAGAAACA
AGATTTTTTCTCAGTTTTGTCAATCCACATAAGGGTGTCACCTCTAGCAC
TATTGGGAGATGGTTAAAAACAGTCTTAGGTAACGTTGGGGTAGACATCT
CAAAATTTACAGCACATTCTACTAGATCTGCAGCCTCCTCTAAACTCAAG
GTATTGGGAGCCTCAGTGTCGGAAATAATGAATTGTGGGAATTGGAGCAG
TGCTTCAACATGGCAAACTTTTTATCATAAACCTATTCTTAGCAATCTTG
AACAGGCTCAGAAGGAGATGTTAAAATGAGCTTTGAACAAGGAAGGGCAC
TGGCCGAACGCGGCCTTTTGGCCACTTTTCGGATCCCATGGTCGCACCAT
AAAATCTTGCAAGATTTTTTGATGTAAAATTCGAGAATTTTATAAGCGCG
ACGCGAAGCGTCGCGCGAAATGAAATTTAGATTTTACATCAGAAAATCTA
AGAGAATTTATGGTGCCTCGCCCTCCCTCCCTGTTGACATAAATTCTTAT
CATCTGATTCTATCATATTTTTC Run BLAST on NCBI transcript from alignment at sc0001592:59463..61585+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037228 ID=TCONS_00037228|Name=TCONS_00037228|organism=Clytia hemisphaerica|type=transcript|length=2123bp|location=Sequence derived from alignment at sc0001592:59463..61585+ (Clytia hemisphaerica)
CACTGGAAGgtcttctttccaaaaaaacaaaaattttcgaattttgacaa
atttttatttttcgatgacgtcatcgtttcatgacgtcattttggcttat
ttccttaatatctcctgatatattcattttcagatataggttgtgacctt
tttctttatcagtttttcatgctctttgGAATGGAACAAACATTTTTCAA
TTTTGATGACTTTTTATTttggttgccatagtaaccaatgacgtcagttt
ccatggcaacgggtggtcacacccggccccacctctcaaattttgatctt
ctacattcaaggaacaatattcaatcataaaatccctttgcacaagctgc
tgcacacgggaagctttttcgcgacatagtggccTTTACTATTGGGAATT
TCTCAACGAGAATGGGACCATGATTACTGCGTCCTGGATCCcatcaaaag
aaaacaaaatagcGGATTGGAGGTCAAGACAAAAAGCAAACTCCAGCGAG
TGGGAGCTATCAAACCAAATATTTTGGAAACTAACAAATTTATGGGGATT
ACCGGAAATAGATTGCTTTGCATCAAGGATAATGAGAAAACTACCTCTTT
ACATGTCCCTAAATCCAGACCCAGAGTCGTTAGCAACAAATTCTCTTTAC
CAGAACTGGGGAAAATACCCTTACCTGTTTCCACCCTTTTGCCTAATGGG
CAGGGTTTTAAAGATCATCAAGAAACAATCAACTCCAAAAGCGCTAGTAA
TAGCTCCGCTTTGGCCAGGACAACCTTGGTTTCCAGTGTTGCTATCAATG
TTGATAGCAGAACCTGTCCTGTTACCTCAGAAAAGAAACATACTTCTGAA
TCACATGCAAAAACCACACCCGTTAGTCTTAAACCACACCCTACAACTTG
CGGCGTTTCTAGTATCCGGGAACAGTTACAGAAGCAAGGCTTTTCAGAAT
CAGCTTCCTCAATCATGGTCCAGGCAAGACGCGAAAGCACAACTTGTGCT
TACAAAACGCCTTGGAGAAAGTGGGTTCTGTGGTGTGGCGGGAAACAGGT
GGATCCCTTTGAAGCACCTGTAAACGTGGTAGTTGAGTTTCTCACAGAAC
TTTACCATGAAGGATATGAATACAGAACTATTAATGTGTATCGATCAGCC
ATATCTGCCTATCATCATCCTGTGAACGGGATCAGGGTAGGACAGACTAA
AGAAGTTTGTCTATTGTTGTCTGGGATAGACAATCTAAGACCCCCGACCC
CAAAGTATAATGTAATCTGGGAGGTTGAGGACGTCTTGAACTGTTTGAGA
GACTTAGGAAAGGACCAAGAGTTGACTAATAAGGATTTGACTTTAAAAAC
AGTTATGCTGATGGCCTTAACTGCCATTAAGAGATGTTCAGACCTTCACA
TTTTTGACACAAGATACATGGCAGTTGGAGAAAATAAAATAGTTTTTAAA
CTTAGTCAGAAACCAAAAGGTTTTAGGAAAAAAGGGAAGAGTCCAAAACC
GGTGTGCTTTATTGCGTCAGGGGTTAGACTATGCCCAGTCTCCACCATCA
AAAGTTACATAGACAGAACTAAAGCGTGGAGAGAAGAGAATGGAGAAACA
AGATTTTTTCTCAGTTTTGTCAATCCACATAAGGGTGTCACCTCTAGCAC
TATTGGGAGATGGTTAAAAACAGTCTTAGGTAACGTTGGGGTAGACATCT
CAAAATTTACAGCACATTCTACTAGATCTGCAGCCTCCTCTAAACTCAAG
GTATTGGGAGCCTCAGTGTCGGAAATAATGAATTGTGGGAATTGGAGCAG
TGCTTCAACATGGCAAACTTTTTATCATAAACCTATTCTTAGCAATCTTG
AACAGGCTCAGAAGGAGATGTTAAAATGAGCTTTGAACAAGGAAGGGCAC
TGGCCGAACGCGGCCTTTTGGCCACTTTTCGGATCCCATGGTCGCACCAT
AAAATCTTGCAAGATTTTTTGATGTAAAATTCGAGAATTTTATAAGCGCG
ACGCGAAGCGTCGCGCGAAATGAAATTTAGATTTTACATCAGAAAATCTA
AGAGAATTTATGGTGCCTCGCCCTCCCTCCCTGTTGACATAAATTCTTAT
CATCTGATTCTATCATATTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037228-exon-sc0001592-1491911889:59463..61585 | TCONS_00037228-exon-sc0001592-1491911889:59463..61585 | Clytia hemisphaerica | exon |
| TCONS_00037228-exon-sc0001592-1510915933:59463..61585 | TCONS_00037228-exon-sc0001592-1510915933:59463..61585 | Clytia hemisphaerica | exon |
| TCONS_00037228-exon-sc0001592-1575043694:59463..61585 | TCONS_00037228-exon-sc0001592-1575043694:59463..61585 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001592 | supercontig | sc0001592:59463..61585 + |
Blast
The following BLAST results are available for this feature:
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