XLOC_021221 (gene) - C. hemisphaerica

Overview
NameXLOC_021221
Unique NameXLOC_021221
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001413:8148..15367+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021221 ID=XLOC_021221|Name=XLOC_021221|organism=Clytia hemisphaerica|type=gene|length=7220bp|location=Sequence derived from alignment at sc0001413:8148..15367+ (Clytia hemisphaerica)
ATCTTTCAGTGCTAATTAACAAAATATCTGTACTATAACATCATCTGCTA
AACAtcaattgcaatgtcttccacacAACTCATCAGATCTCTTCGACAAC
CATTGGTATGTATAAattattgttttaatttttattcttAACTGATTGAA
ACACAttcccatttttttttttctttgtaccAATCCGNATTTTTATTCTT
AACTGATTGAAACACAttcccattttttttttttgctttgataTACAGTA
CCAATACgtggcttttttttaatttaaagatACTGTCTGTTGGCTATTCT
GCTATGATTTTCCTCTAAATTCTTTAAGAAAACACAACTTAGCAGAATTT
AGTTGAATGATGCTTCTGTGAAGCCAATAGTCAAACATTGACATTATGTA
GTAACGTTGCTATTTTGGGTGTGAGGATCTTAGATAGTGTGGATGTGAAG
CTTTGTTGATTGTTGTAGAGTCTTCGAGTTTGAATAACAGTGACCTTATG
TACATTTTTCCTGTTGCTTTAAGTTGCTTTAAGTAAGCCTATGTTCATTG
AACAGTGGAGTCTATTTACTCGGACCTTTATAACTTGAATGTCTCCTTGA
CTCGAATGAggtttatggtcccttcagttaacaatgccttctAAACCTTA
TTCTATGACTCAACATtttcttaactcaaacaaattaGTGTTCGAGTTAG
GGAGACCCAAACCGTAAAACCCATTTGTTTTTTTCCTGTTTGGCAATATC
AGATTACACCATACAAGAAATATTTGCACAACTTAAATCTATATATTGTT
TTCTCTTCTAGCAACAATGTGTGTACAGAACCACTGTTCGATCTCTGTCA
ACAGCAAGAACTGTAGCCTGCAAAGTCACCGATAAAGGTATGTTTTGAAT
GTTgtctaaaataccaaaattaaaGATACTGTAgtattacttttattttt
tatttttaaactttacTGTGTATCTAGTTCTAGCTAAACTATATTCTTTA
AATAATGCGCACTGTTACCAATAACTTATTCTTCTTTTAGCATCTACACC
AGTAGTTGAAGTTGCTGCTGAAAACGCGAAATGTatgatttgttgttttt
aacTGTTGTTACAGCTCTTTAATCTGTTACTTTAGTTTTCCCATGTTTAC
AAGATTCCTCTGTTCATTGGAGAAACTCACCCAGCCCTAGTTTTCGCTTT
ACAAGGTGTCACTTACACCCCATACCAGTTGACATCCATTGTATATTAGT
ATGAGTAGAGGTGGATGGATGATCACCAATGAAAAGTGCTCTAAAAAAAG
GAACAATATAATAATATCCATTGTATAGCGTAGTTAGCCTTTTTAAGATG
CCCAAATGCAGAGAAGTGTCGTTCTGGAGGGAATTGATTGTTGGATATGG
CTGCCACACATTGTTTGGAGTGATTCTCGAGCTGTCTAAGGCTCTTAGGC
CAAAGTAGGGTTCCTGGTTTGAGATAACTGGATTATCCACTCAAAACATC
GAAGATCAAACTGTTCACTTCATATGTTTATTCTCTTCTTTTAGCTACAA
CGCCTATAGTGGAGGCTGTAGCAGAGGCAATTGCTGATCCCACGCCAGCG
GAGTGTAAGATGTGTCTTCTTTTCGACGCTTAGGTCGTCCCTCTGTTAGA
ATCAGAGAACAGACACATCACGCACACACACCATTCATTTGTTTCTTCTA
TCTTGCTATATTAACTCGGTAAGCTCTGGTTTCGACGGCAGAATTTCctc
cctgcctattctaattattagtagagtaggcagaaagttggtgtttaaaa
tctttgcttgaaaaggattggtcattgcattgacgtcaaaaaaggacAAC
TTTTACCAACTTTAGTTCACAACTGGAATAGGCAGGACAAAAGGTAGGCC
GTCCAAACCAGAGCTAATTCATTACATTGTTTTGTCACCAGTATCGTATC
TATTCAGTTTATTTCATGATACATCAACTACATACCATCGTAACTTCTAC
TAATGTAATTTATATAAAGCCAATAACAATCTACTTACACTTGACATAGA
AATAATAAACTAACCTTATATCAGCTTAGACAGCTTATCAGTGATCACGT
CAGGTGACACTCCAACAGATTAATACAATTGTTGATACGAACAACCATAA
TCTTTTCAATTATAGCTGTCGCAATAGAATCGGAAGCAGTCGCCGAAGAA
ACCGTCGAAGCTGTCTCTGAAGTTGCCGAAGCCGTTGAATGTATGCAAAC
CAATTAACAGTTTAGACGTTTAGAAACTCTCTCTTAGTATGAGAAGTTTA
TAGCATACACGTACACCGTTCGTCTGTATTTTCCGTATAAATTGCTCTTT
CGTTATACTGTAGTACCATAGTAATATCTTTAGATCTAGCTATCTTGTCT
GCTTTACTTACCTGCTTTATCGTTGTCATCGCGTGGAATGTAGACGTTTA
GAAATCTTCTCTTAGAACGAGAAGAAGGGGTCCAACATACACACACAACA
TTTGTTATGAACTTGTATTAAGTTCAACTCTAAAGTGTGTTTCAATATTC
TTGTAGCAGTTGTCGAGGAAGTTGCTGCCGAAACTGCAGTTGTTGAGGAA
GCTGCTGCCGAAACTACAGTTGTCGAGGAAGCTGCTGCTGAAACTGAAGC
AGTCATTGAGGAGGCTGCTGCCGAAACTGAAGCAGTCGTCGAGGAAGTTG
CTGCTGAAACTGAAGCTGTTGTCGAGGAGGTAGCTGCTGAAACTGAAGCC
ATCGTCGAAGAGGCTGCTGCCGAGACTGAAGCAGTTGTTGAGGAAGTTGT
TGCCGAAACTGAAGCCATCGTCGAAGAGGCTGCTGCTGAAACTGAAGCAG
TCGTCGAGGAAGTTGTTGCAGAAACTGAAGCCATCGTCGAGGAGGCTGCT
GCTGAAACTGAAGCAGTCGTCGAGGAAGTTGTTGCCGAAACTGAAGCCAT
CGTCGAAGAGGTTGTTGCTGAAACTGAAGCTGTTGTCGAAGAGGCTGCTG
CCGAGACTGAAGCAGTTGTTGAGGAAGTTGCTGCCGAAACTGAAGCCATC
GTCGAAGAGGCTGCTGCTGAAACTGAAGCTGTCGTCGAGGAAGTTGCTGC
CGAAACTGAAGCCATCGTCGAAGAGGCTGCTGCTGAAACTGAAGCTGTCG
TCGAGGAAGTTGCTGCCGAAACTGAAGCCATCGTCGAAGAGGCTGCTGCT
GAAACTGAAGCTGTCGTCGAGGAAGTTGCTGCCGAAACTGAAGCCATCGT
CGAAGAGGTTGTTGCTGAAGCTGAAGCAGTCGTCGAGGAAGTTGTTGCTG
AAACTGAAGCAGTCATCGAAGAGGCTGCTGCTGAAACTGAAACAATTATT
GAGGAAGTTGCTGTCGAAGCTGAAGTAGTCGTCGAGGAGGTAGCTGCTGC
TGAAACTGAAGCTGTTGTTGAGGAGGCTGCTGCTGAAACTGAAGCAGTCA
TCGAGGAAGTTGCCGCTGAGACTGAAGCAGTTGTCGAGGAAGTCGCTGCC
GAAACTGAAGCGGTTGTCGAGGAGGCTGCCGCTGAAACTGAAGCAGTTGT
CGAGGAGGCTGCCGCTGAAACTGAAGCAGTTGTCGAGGAACTCACTGCCG
AAACTGAAGCGGTTGTCGAGGAGGCTGCCGCTGAAACTGAAGCAGTTGTC
GAGGAGGCTGCTGCTGAAACTGAAGCAGTCGTCGAGGAAGTTGTTGCTGA
GACTGAAGCAGTCGTCGAAAAAGTTACTGCAGATTCTGAAGCAGTCATCG
AAGAGGCAGCTACTGAAACTGAAACAGTCGTCGATGAGGTAGCCCCTGAA
GTAGAAGCAGTCGCTGAAGAGGCAGCCCCTGAAGTAGAAGCAGTCGCTGA
AGAGGCAGCCCCTGAAGTAGAAGCCGTCGCTGAGGAGGCAGCCCCTGAAG
TAGAAGCAGTCGCTGAGGAGGCAGCCCCTGAAGTAGAAGCAGTCGTTGAG
GAGGCAGCCCCTGAAGTAGAAGCAGTCGCTGAGGAGGCAGCCCCTGAAGT
AGAATCAGTTGTTGAGGAGGTAGCTCCTGAGCCAGAGGTTGTAGCAGAAG
AGGCATCTGCTGGACCAGAGAGTATGTTGTTAATGCTCTTAAATTTTTAC
GCCCTTAATAGTTgtctttggtttgattttcCCAGCAATCTCGAGTTCGT
TATCCTCTGATCTTTAATTAAGTGCGTCTGAACTTTGCTTTTCTTTCTCT
TCCCTTAGAAAAGGGCAAATGAATTGAACTTTAGAAACTGCTGCTTTCTT
CATCTCCTGCGATTTTCTGAGTCCTTTTCCTAGCTCTACTTTTACTATCC
ACTAATACTGAATACTGATAATAATTTTCTGTAATTTATTTGTCCTTTTC
TAGAACCAGAGCCGAAAACTCTTTGGGAAAAGATTAAACGaatcttcaat
ttttaagtCGTCGGCAAACTCAGTTGACGGCGTAGTAGTGAAGTATGTCG
TGTTTTATCGTTATATTTAACCTTAGATTAGATTTTCAACTTGGTTGGAC
ATGAATAATTCTAACGAGGGAAATCTGTATATTATTTCAACGGTTTCTTA
TATCAACTTGGCTACTTCTTCTCTTGCAATTTTAAGGGTGTCAATATTGt
ctgttttttcttttcaaataacgTCATTCATCGTCAATTtacctttataa
accctggaccaagctatttCCACCatatttgatcggagtttttatgaaag
tggtacccgcaaagaattTATAGTTAAGATTTTGTTTGAcaacaaacggc
gctacatcacttGCGTGCAAgcgaaagtagatctagcgctctcgatgcgg
gtaccactttcaaaaatattccgaTCAAAATATGTTGGTTGGCCGGGACT
GAGAAACTGCCTCCGGGGTTTATGTAAAGCTCAATCAACTATGAATTATG
AATCATTTCTAAGTTCAACGTATTCTGATAATGTAATATCAAGTCTCAAA
TTGAATGCAATCCCTCTGTATCTTTCAATGATCGGAGGGCTTCTTTGAGT
CAGTAAcgccatagtataagaaagccgcggctggaatgatgacgctattg
tttttgtcgttAATGGATGTTTTATCTGTGTCTCCGTGATTTATAAGAAC
TAAATCTAAGCTAGCAAAATCTTCAACCTGAAAAGTGTTTATAAAATTCA
ATTAAAGAATAATTACTTTTCAAGTCTTAGATTTTTCTCACTGCCCTCTA
ATTAGCTTGTTcgaagtatattcttataaattccagataaaattttaaaa
atttaggaCCAAATAACGCACATTTTAAtacaagaactaattttcaaatg
ttaaactttGAATGCTTGCCGTCATCTCAATACTGTTGATTTTCGAATGA
AGTTTTCAAGAATACTGCTTgaatattgattttttaataTCAGTAAGAAT
TGTTCAAAATAATCAGGAAGGCACTTCGAAGCACttaattttcttcaagt
tcttaaagcacTGACATTCTGTTCGCTCTAATATTTTAAACCGAAactct
tttcttttactttgatattatgaatgcgtgaattatcaagagatttgtgt
ttatgagcaaaattacgTCTTACGAGGGACTTTGTTAAAAGTCAGATTAA
ATTGACAATGGAAATTGTCATtgaaccataaaaaaattcgttcttacgac
atagatagaacaacagaaattcaactgaactcattccagccgcggctttc
ttatactatggtaacGCTTTTCAGGTAATTAACGCTCATTACCATATCTA
GGCTTTGCTTACTTTTAGGTGTACACACTttcacgagcagaaactttcgc
gaggtcgaaaaatcgtaacatttactttcgcgaatttgacaaaaaaaatt
ttcgttagcataaactttcgcgaatgaggTATATTTTTAGTAGAAAATTC
AAGTTTTCGGTGCATAAAACCAGTTTTTGATGGACTTTCGCATAATATCT
ACACTAAATTTTATCCTTGTTATCATCAAGACGTTTACTTTCGCGACAAg
ggctaaaattcgcgaaaatcgtttctgctcgcgaaagtttgtacgcctaa
taAAGTAGTTGCCTGTCAACAGTAATATTGTTAAAAGGTTTTTAGGCCGC
TAATGATAAAGAAAATTGTGTGAGGTATTTCAAATGACCTGCAACTTATA
TAGCTCGCCTATAACATATCACACAAGAATAACTGTGCCGTAGTGTACTC
TTCTGACTTTTTCACTCAGGTTTATTTATCTCAATTTCAAAAGTATTTCT
AATCTTTCTACTAGTTTTGCCTTAAAATGGAAAGAcgtgaaaaattttaa
aggtaTAATGAGATATTTGGCCTCCAGATATTTTCCAAAGTCCTGAGAGA
AACAACCGAAAACTTTTCAGTGCGGATAAGCACAATATAAAAACATATCT
GATTAtacctttaatttttttaacgacTTTCCATTTCAAAGCAAATCTTA
AGGTATTAAGGTATGTTTACACCTTTCTTAACACAATATTTTTAATTGGT
CATATCTACGTCAAAAGTATTTtctgacaaaaaaatcaaaaaaaaggtgt
acacataccttactcttaggtgccaaataaacagggggagttgaaagatt
ttcaacattttaataaacgggggtgacgtaattgccggggggttggaaat
tgtacttctgaaaacccaaaaataaggtaaatataggctaaaatcaggct
atttagagcaaaataagggaccttctctttgacagcttaaaatattctta
aaaattaataaacgggggggtcctaattaGTTCCGGGGGGTTAGAAACtt
ctcgaaaaattaacaagcggggggggggtttatAAGAAAAGAAAGGCTCA
AAATAGTTGGAGCTAAAATTAAGAGCTGATAGTAGTACGCGCTCATTATC
ATAATAACTACttatcatttttctttgtttctcgTTTCCCCAGGTAGAGT
AGACATAGGAGCCAAACAGCCATCGCCAGCAGCTGAACCATCCATTCCAC
AAGATCAAGCAGCATTCGACGCGTACAATGCAAATTACAAATGTCCGGAA
TATTACAAACACGATGAATTCGCGTTTTACGATATCGAAAACGATATGCA
ATCGAGTCGAATCGAGCAACCTAGTGCTTTATAATAGTTGTTGttttaac
aaagaaaattggtgtttttttagattttgttgCTAACTTGGAACTTGTTC
ATACTATTGAAATGTAGATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036091TCONS_00036091Clytia hemisphaericatranscript
TCONS_00036092TCONS_00036092Clytia hemisphaericatranscript
TCONS_00036093TCONS_00036093Clytia hemisphaericatranscript
TCONS_00036094TCONS_00036094Clytia hemisphaericatranscript
TCONS_00036095TCONS_00036095Clytia hemisphaericatranscript
TCONS_00036096TCONS_00036096Clytia hemisphaericatranscript
TCONS_00036097TCONS_00036097Clytia hemisphaericatranscript
TCONS_00036098TCONS_00036098Clytia hemisphaericatranscript
TCONS_00036099TCONS_00036099Clytia hemisphaericatranscript
TCONS_00036100TCONS_00036100Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036097-proteinTCONS_00036097-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001413supercontigsc0001413:8148..15367 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
125.55	129.12	90.83	88.16	20.4	16.72	25.84	25.16	67.93	56.8	60.33	59.93	35.89	38.3	47.64	50.79	136.89	134.45	27.27	32.24	136.95	138.06	249.35	290.72	163.04	133.59	337.25	288.4	233.36	162.79