XLOC_010519 (gene) - C. hemisphaerica

Overview
NameXLOC_010519
Unique NameXLOC_010519
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000306:250672..255312+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010519 ID=XLOC_010519|Name=XLOC_010519|organism=Clytia hemisphaerica|type=gene|length=4641bp|location=Sequence derived from alignment at sc0000306:250672..255312+ (Clytia hemisphaerica)
TAGCATGTGGTGTTGTTCCCAGTCCTTTTGATTGTTACCTTGCCAACCGT GGTGCTAAAACATTGAAAGTGCGCATGCTCCAACATCAAAAGAACGCAAT GGCCGTTGCTAAGGCTTTAGAAGCCCATCCATTGGTTGAACGTGTTTATT ACCCAGGTTTGTAAAATTTATGCATTAAACATTTTTCTATTTCTGTAGAC CAATCATTACAAGCGATTTTAACAAATAAGATGGAACGTTCCAGCAAAAA GAACGATACTGAACGTTCTAAGATGTTCAGGTGCGTTAGAGGACGTCCTT GAACGGATCCCCAAATTGACGCTTCTTCCTGGAGGAAACTAGTTTTCGCG TTTTTTTGGTTTGAAGAAAAATCTAAACCTTCCAAATGTTAAAAGTTTTC TCGATCTTATTCAGAAATTTAGCGAGTCAGAATAAAAAATTCTCCATCTA GTACTAAATAAACTCTTGCACCGCAAAATAGGTTACGCGAAAAGaaattc cgcgaaaataagttgtTCCCTTATTAGTATAACAAAATGAATACCTTGCC TTTTCTTTAGGATTGAAGAGCCATCCAGCTCATGAATTGGTCAAACGACA ATGCACTGGCTTCAGTGGTATGGTTTCCATGGTCATCAAAGGAAATTTGG AAACCGCTTCCAATTTCATGAAAGCATTAAAGGTATGAAGAAAGGGTTAA ATAATCTCCAATCTCCAAaagatttatttatgatttacgAATCATTCTCA TTTTGTgctattttcaaagttttgagcTCCCCTAAAGGCCTATAATTTCA CGAAATGATATTTTACTATGAGTCTATCAAAATTTTCTAGATACAGTTTG GTTAGTAAATAGACTGATGAAACGCCATTGCGAACTTTCACTCGAtgaat cttttgaaaatagtttccTTTAGGAAATCGTTTGACCTTTGGTTTACTTT GATGGTATAAAATTTCGAAACTGCGAAATGTTATACCATTAAAGTATAAT ACATAGGGAATTTTTCAATCCTCCCATTTTTACGTAACGATTGAAATCCT CAAACATTTTCTAGTACAATTATATGGGTTTAGTGACTGTAGACCTTAAC CTTTTAgacttttttcaatattttgttcaCCTATATTTCAGGTGTTCACT TTGGCCGAAAGTTTGGGAGGATTTGAGAGCTTAATCGAGCACCCGTAAGT AAAGTGTCAATTTCTCCCAAGAATCACCTATCTTTAATTTTCACTCTATT ACGAAGACTAACTATGCTCCACTCCAATTATATCCCTGGCCTTTTTGTAA CACTTAACAAAATACAATCTACGCGATACTTAGTAACTCTTAGTAAATTT CGTGgttacacatttttttcaaaaggatacTAGCCAGTTTTGGCTGAAGA ATAGCTGTTCTTTTTTTTCGTAATTTCTAGGCTTAaaggttcttaaaatg tttttaaaatgtttttaataagcTTACTTTATTAATTTATTGAGACTTGA AAAAGCTTTCTTAGCCATTGCTAAATCTTTGTTCTTCGAATTTGAGCCTc atgatgttcttataaaatcgtACCCAtagaattgtttttataaaatagcg TGTAATTACAGGTATCTATATAATAATAGCCGTACGTGTCTGAATCCCTT TTTGCAGCGCTTTTGTTTTCGATAGCGGTTTTAGCTTGGGACGTCACAAA ATTAATtgcaaaatagagaaaaaaacagGATTACTCCAAACACATTTCGT CAGTCATCATGTACATTCTACGATAAAAGATAATTAGCAACGGATTTGAA GGCCCTAAATGTGAAACTGATAATTTTGCATCGAAGGATAAAGTCAACTT CACACCTGAGATGGCTATTTTTATAATGACAAAGTCGNAACTGATAATTT TGCATCGAAGGATAAAGTTAACTTCACACCTGAGATGGCTATTTTTATAG TGACAAAGTCTTCTTTGACGACGTCTGGGACCGCTATTTAACAAAATGAG TTGATTTTTCTTCTAGCGCTATTATGACCCACGCTTCAGTTCCAGAAGAT CAACGAACAAAACTCGGAATTACTGATACTTTCGTATGTtaatttttcca tttcttttatttaaaatatctCACTCTAAAGGAGCTAAGATTTTTTGGGT TAGATTTCCTTGTTATTCATTGCAAGGTCACACGTTTTTAACTTTCTGTT CATACTGCAGTATaattttattcattcgttttCAAGAAATATAAATCAGA TTTTCATGACTTTTATGGTAAATTCCGTTGAAAAGGAACTTAAAGGTTTG TATAGTTTAAACACAACCTTGTCACCGTGTAtgccaggctttatttacgt tactgattgacgtcTGGCGCTAAcagtaagcataaaaagctgataatacg cagggaaatGAGGTTGGTTTAAACATAGATGTTGTTAAAATTTTGACGCa aatttattcattttcttCTAGTTGAGAATGTCAGTTGGGCTAGAGGAAGC AGAAGACCTCGTCGCTGATATTGAACAAGCTTTAGCTGCTGCCAACGTAA GTGTTTCGTCtctttaattgttctctttaggTTATTCTCTCAGTTAAGGC CATGTTTACACGTCACATGTAAGCGTTATTTCGTCTCACACGCTACTTTC CGCCTCGCTCTGAAACGAAATGAAGTTATTTTATTGGTTGAATTCAATTG TTTCGttacttctaaccaatagagcGGCTTTATTTCGTTTCTGAGTGGAA CGAAACCGTTGTCTGCCAACATGGTCTAATTAACTTCAAGTCACTATACG AATACGAATACGTCAGTGTTCGGTACAATTGACGCTttctaatttgattt tcaaggaGAGTTGGACTTTCATCGAAAAATGtaagcgtcgtttatgagag tttcttgttggcGATATTTCGCCAGTTAATTTTTATAAACTATATGAGCA CACGCGGGCGACCTCCGTGATATACACTATGCAAAAATTCTACTTACACC CCCCCCCAATACATTGAACGTATGTAATGTAGCAATACATTGAACGTATG TAGACGCAAATCAAGTTATAAGCTATCAAGTTAGAACAGAAGAGGAAAAC CATACGATTCTTGCTTATTTACTCATTCATTGACTCGTTCATtcatccat tcattcattcatccattCAGTCTGAAGATCCCCCAAGCAAACGACAAAAG ATTGCATAAACAAAACACGTACACACACTTATAATAAACAGGTACTCTCC CTCCCACCCTGACTTTTACTCCCTCCCCCACCCTGACTTTTACTACCTCT CCCACCCTAACTTTTACTCCCTCTCCCACCCTGACTTTACTCCCTCTCCC ACCCTGACTTTTACTACCTCTCCCACCCTAACTTTACTCCCTCTCCCACC CTGACTTTTACTCCTTTCCAGTAGGTCacagaaaaatgagaaaatgagaa aaatatacATGAGAGAGATATACATTTTTTGTCATTTCCAGTCAATGTTG AagccaatttcaaaaaaaggcCTAATCTTTTTTTACGTAAACATGAATTT GAGGATTCTcttaaaaaaagattgaaaactcGAAGAGCTGTTACAATCTG CTCTCTTCTTTCGCAGAGGGGGGACTGAAAAAATATGTCGTAgtttaatt gttttcttttttttcttatcaTTCTCAGAATTAATTTTGGGTGACGGTAT GTAATTTTTTTGGTGTTGACGAAAAAAATGACtgaattttatttataaaa tggACATgtctaattttattttttagaaaaagaaaaatctattttatttt gttatttatatCAGCAATTaaaattcaaccaaaaatattttaggtatttt tcagttgatgatttgttttttatgaaagtaagtttgaaaaattcgGTTTC AggtttatgttttaaaatttgcTTTTTGAGGAACATCTTTTATTATTGAA GGATTATTTTccctgttttttttatttctaaattcTCTTTTTCAATTTAG AAACCTTTCGCACTTAAGAACCATGATACTAATTTTTAGGGATTtctaga tttttaaaagaatagtaaaattgataaaaaattgaaagataaaGATCTAA TAGTGACattgcaaaaatttttcttttttctgtttgAAACCATCcccatt taaattttttttctgtttttaggtttgagatattttaagCTTTTAGTCAC CCAATACTCCAGTTTTTTACATAACAGCGAGGCTCAAAAACGCTGAGAAA TGAGAACAGTTAAAGAACAAAGCTGAGCCTGGAATTTCTTAATTTCAAGT GAgtcaaaaacgtaaaaatttgattgaaacCTAAATTGCCTCTATTTTGA CCGAAAATAAAACAGTATTACGAGAATTTTGTGCCGCAAGTGCCTCTGCA AAAATTTAGGCCTTTAAAAACAATTGTAGcattttttgatagtttttccN GCCGCAAGTGCCTCTGCAAAAATTTAGGCCTTTAAAAACAATTGTAGCat tttttggtagtttttccttTTAGTTTTCTTAGATCTTTATTGTTACgttg ttctcattttttttaattgggccattccaataaatctccatacagggggg ggggtggacgtATAGTATAGGTATGTGTGAATACCCtctgg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018785TCONS_00018785Clytia hemisphaericatranscript
TCONS_00018786TCONS_00018786Clytia hemisphaericatranscript
TCONS_00018787TCONS_00018787Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018786-proteinTCONS_00018786-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000306supercontigsc0000306:250672..255312 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.75 11.89 16.66 16.41 6.98 6.5 28.44 39.94 103.36 58.05 62.73 105.24 69.84 79.41 10.25 9.15 6.55 7.62 3.71 1.83 18.8 19.84 10.95 8.65 89.83 161.93 16.01 14.64 4.1 3.56