TCONS_00018786-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018786-protein
Unique NameTCONS_00018786-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length169

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018786-protein ID=TCONS_00018786-protein|Name=TCONS_00018786-protein|organism=Clytia hemisphaerica|type=polypeptide|length=169bp
ACGVVPSPFDCYLANRGAKTLKVRMLQHQKNAMAVAKALEAHPLVERVYY
PGLKSHPAHELVKRQCTGFSGMVSMVIKGNLETASNFMKALKVFTLAESL
GGFESLIEHPAIMTHASVPEDQRTKLGITDTFLRMSVGLEEAEDLVADIE
QALAAANSEDPPSKRQKIA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010519XLOC_010519Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018786TCONS_00018786Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000277Cys/Met-Metab_PyrdxlP-dep_enz
IPR015422PyrdxlP-dep_Trfase_sub2
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..159
IPR000277Cys/Met metabolism, pyridoxal phosphate-dependent enzymePFAMPF01053Cys_Met_Meta_PPcoord: 2..153
e-value: 4.5E-62
score: 209.7
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 23..169
e-value: 7.9E-57
score: 190.9
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 3..154

Blast
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BLAST of TCONS_00018786-protein vs. Swiss-Prot (Human)
Match: CGL (Cystathionine gamma-lyase OS=Homo sapiens GN=CTH PE=1 SV=3)

HSP 1 Score: 198.749 bits (504), Expect = 5.505e-63
Identity = 107/161 (66.46%), Postives = 127/161 (78.88%), Query Frame = 0 
Query:    3 GVVPSPFDCYLANRGAKTLKVRMLQHQKNAMAVAKALEAHPLVERVYYPGLKSHPAHELVKRQCTGFSGMVSMVIKGNLETASNFMKALKVFTLAESLGGFESLIEHPAIMTHASVPEDQRTKLGITDTFLRMSVGLEEAEDLVADIEQALAAANSEDPPS 163
            G VPSP DCYL NRG KTL VRM +H KN MAVA+ LE++P VE+V YPGL SHP HELVKRQCTG +GMV+  IKG L+ A  F+K LK+FTLAESLGGFESL E PAIMTHASV ++ R  LGI+DT +R+SVGLE+ EDL+ D++QAL AA+   PPS
Sbjct:  244 GAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAH---PPS 401
The following BLAST results are available for this feature:
BLAST of TCONS_00018786-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CGL5.505e-6366.46Cystathionine gamma-lyase OS=Homo sapiens GN=CTH P... [more]
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