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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018786 ID=TCONS_00018786|Name=TCONS_00018786|organism=Clytia hemisphaerica|type=transcript|length=1507bp TAGCATGTGGTGTTGTTCCCAGTCCTTTTGATTGTTACCTTGCCAACCGT GGTGCTAAAACATTGAAAGTGCGCATGCTCCAACATCAAAAGAACGCAAT GGCCGTTGCTAAGGCTTTAGAAGCCCATCCATTGGTTGAACGTGTTTATT ACCCAGGATTGAAGAGCCATCCAGCTCATGAATTGGTCAAACGACAATGC ACTGGCTTCAGTGGTATGGTTTCCATGGTCATCAAAGGAAATTTGGAAAC CGCTTCCAATTTCATGAAAGCATTAAAGGTGTTCACTTTGGCCGAAAGTT TGGGAGGATTTGAGAGCTTAATCGAGCACCCCGCTATTATGACCCACGCT TCAGTTCCAGAAGATCAACGAACAAAACTCGGAATTACTGATACTTTCTT GAGAATGTCAGTTGGGCTAGAGGAAGCAGAAGACCTCGTCGCTGATATTG AACAAGCTTTAGCTGCTGCCAACTCTGAAGATCCCCCAAGCAAACGACAA AAGATTGCATAAACAAAACACGTACACACACTTATAATAAACAGAATTAA TTTTGGGTGACGGTATGTAATTTTTTTGGTGTTGACGAAAAAAATGACtg aattttatttataaaatggACATgtctaattttattttttagaaaaagaa aaatctattttattttgttatttatatCAGCAATTaaaattcaaccaaaa atattttaggtatttttcagttgatgatttgttttttatgaaagtaagtt tgaaaaattcgGTTTCAggtttatgttttaaaatttgcTTTTTGAGGAAC ATCTTTTATTATTGAAGGATTATTTTccctgttttttttatttctaaatt cTCTTTTTCAATTTAGAAACCTTTCGCACTTAAGAACCATGATACTAATT TTTAGGGATTtctagatttttaaaagaatagtaaaattgataaaaaattg aaagataaaGATCTAATAGTGACattgcaaaaatttttcttttttctgtt tgAAACCATCcccatttaaattttttttctgtttttaggtttgagatatt ttaagCTTTTAGTCACCCAATACTCCAGTTTTTTACATAACAGCGAGGCT CAAAAACGCTGAGAAATGAGAACAGTTAAAGAACAAAGCTGAGCCTGGAA TTTCTTAATTTCAAGTGAgtcaaaaacgtaaaaatttgattgaaacCTAA ATTGCCTCTATTTTGACCGAAAATAAAACAGTATTACGAGAATTTTGTGC CGCAAGTGCCTCTGCAAAAATTTAGGCCTTTAAAAACAATTGTAGcattt tttgatagtttttccNGCCGCAAGTGCCTCTGCAAAAATTTAGGCCTTTA AAAACAATTGTAGCattttttggtagtttttccttTTAGTTTTCTTAGAT CTTTATTGTTACgttgttctcattttttttaattgggccattccaataaa tctccatacaggggggggggtggacgtATAGTATAGGTATGTGTGAATAC CCtctgg Run BLAST on NCBI protein sequence of TCONS_00018786-protein >TCONS_00018786-protein ID=TCONS_00018786-protein|Name=TCONS_00018786-protein|organism=Clytia hemisphaerica|type=polypeptide|length=169bp
ACGVVPSPFDCYLANRGAKTLKVRMLQHQKNAMAVAKALEAHPLVERVYY PGLKSHPAHELVKRQCTGFSGMVSMVIKGNLETASNFMKALKVFTLAESL GGFESLIEHPAIMTHASVPEDQRTKLGITDTFLRMSVGLEEAEDLVADIE QALAAANSEDPPSKRQKIA Run BLAST on NCBI transcript from alignment at sc0000306:250672..255312+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018786 ID=TCONS_00018786|Name=TCONS_00018786|organism=Clytia hemisphaerica|type=transcript|length=4641bp|location=Sequence derived from alignment at sc0000306:250672..255312+ (Clytia hemisphaerica) TAGCATGTGGTGTTGTTCCCAGTCCTTTTGATTGTTACCTTGCCAACCGT
GGTGCTAAAACATTGAAAGTGCGCATGCTCCAACATCAAAAGAACGCAAT
GGCCGTTGCTAAGGCTTTAGAAGCCCATCCATTGGTTGAACGTGTTTATT
ACCCAGGTTTGTAAAATTTATGCATTAAACATTTTTCTATTTCTGTAGAC
CAATCATTACAAGCGATTTTAACAAATAAGATGGAACGTTCCAGCAAAAA
GAACGATACTGAACGTTCTAAGATGTTCAGGTGCGTTAGAGGACGTCCTT
GAACGGATCCCCAAATTGACGCTTCTTCCTGGAGGAAACTAGTTTTCGCG
TTTTTTTGGTTTGAAGAAAAATCTAAACCTTCCAAATGTTAAAAGTTTTC
TCGATCTTATTCAGAAATTTAGCGAGTCAGAATAAAAAATTCTCCATCTA
GTACTAAATAAACTCTTGCACCGCAAAATAGGTTACGCGAAAAGaaattc
cgcgaaaataagttgtTCCCTTATTAGTATAACAAAATGAATACCTTGCC
TTTTCTTTAGGATTGAAGAGCCATCCAGCTCATGAATTGGTCAAACGACA
ATGCACTGGCTTCAGTGGTATGGTTTCCATGGTCATCAAAGGAAATTTGG
AAACCGCTTCCAATTTCATGAAAGCATTAAAGGTATGAAGAAAGGGTTAA
ATAATCTCCAATCTCCAAaagatttatttatgatttacgAATCATTCTCA
TTTTGTgctattttcaaagttttgagcTCCCCTAAAGGCCTATAATTTCA
CGAAATGATATTTTACTATGAGTCTATCAAAATTTTCTAGATACAGTTTG
GTTAGTAAATAGACTGATGAAACGCCATTGCGAACTTTCACTCGAtgaat
cttttgaaaatagtttccTTTAGGAAATCGTTTGACCTTTGGTTTACTTT
GATGGTATAAAATTTCGAAACTGCGAAATGTTATACCATTAAAGTATAAT
ACATAGGGAATTTTTCAATCCTCCCATTTTTACGTAACGATTGAAATCCT
CAAACATTTTCTAGTACAATTATATGGGTTTAGTGACTGTAGACCTTAAC
CTTTTAgacttttttcaatattttgttcaCCTATATTTCAGGTGTTCACT
TTGGCCGAAAGTTTGGGAGGATTTGAGAGCTTAATCGAGCACCCGTAAGT
AAAGTGTCAATTTCTCCCAAGAATCACCTATCTTTAATTTTCACTCTATT
ACGAAGACTAACTATGCTCCACTCCAATTATATCCCTGGCCTTTTTGTAA
CACTTAACAAAATACAATCTACGCGATACTTAGTAACTCTTAGTAAATTT
CGTGgttacacatttttttcaaaaggatacTAGCCAGTTTTGGCTGAAGA
ATAGCTGTTCTTTTTTTTCGTAATTTCTAGGCTTAaaggttcttaaaatg
tttttaaaatgtttttaataagcTTACTTTATTAATTTATTGAGACTTGA
AAAAGCTTTCTTAGCCATTGCTAAATCTTTGTTCTTCGAATTTGAGCCTc
atgatgttcttataaaatcgtACCCAtagaattgtttttataaaatagcg
TGTAATTACAGGTATCTATATAATAATAGCCGTACGTGTCTGAATCCCTT
TTTGCAGCGCTTTTGTTTTCGATAGCGGTTTTAGCTTGGGACGTCACAAA
ATTAATtgcaaaatagagaaaaaaacagGATTACTCCAAACACATTTCGT
CAGTCATCATGTACATTCTACGATAAAAGATAATTAGCAACGGATTTGAA
GGCCCTAAATGTGAAACTGATAATTTTGCATCGAAGGATAAAGTCAACTT
CACACCTGAGATGGCTATTTTTATAATGACAAAGTCGNAACTGATAATTT
TGCATCGAAGGATAAAGTTAACTTCACACCTGAGATGGCTATTTTTATAG
TGACAAAGTCTTCTTTGACGACGTCTGGGACCGCTATTTAACAAAATGAG
TTGATTTTTCTTCTAGCGCTATTATGACCCACGCTTCAGTTCCAGAAGAT
CAACGAACAAAACTCGGAATTACTGATACTTTCGTATGTtaatttttcca
tttcttttatttaaaatatctCACTCTAAAGGAGCTAAGATTTTTTGGGT
TAGATTTCCTTGTTATTCATTGCAAGGTCACACGTTTTTAACTTTCTGTT
CATACTGCAGTATaattttattcattcgttttCAAGAAATATAAATCAGA
TTTTCATGACTTTTATGGTAAATTCCGTTGAAAAGGAACTTAAAGGTTTG
TATAGTTTAAACACAACCTTGTCACCGTGTAtgccaggctttatttacgt
tactgattgacgtcTGGCGCTAAcagtaagcataaaaagctgataatacg
cagggaaatGAGGTTGGTTTAAACATAGATGTTGTTAAAATTTTGACGCa
aatttattcattttcttCTAGTTGAGAATGTCAGTTGGGCTAGAGGAAGC
AGAAGACCTCGTCGCTGATATTGAACAAGCTTTAGCTGCTGCCAACGTAA
GTGTTTCGTCtctttaattgttctctttaggTTATTCTCTCAGTTAAGGC
CATGTTTACACGTCACATGTAAGCGTTATTTCGTCTCACACGCTACTTTC
CGCCTCGCTCTGAAACGAAATGAAGTTATTTTATTGGTTGAATTCAATTG
TTTCGttacttctaaccaatagagcGGCTTTATTTCGTTTCTGAGTGGAA
CGAAACCGTTGTCTGCCAACATGGTCTAATTAACTTCAAGTCACTATACG
AATACGAATACGTCAGTGTTCGGTACAATTGACGCTttctaatttgattt
tcaaggaGAGTTGGACTTTCATCGAAAAATGtaagcgtcgtttatgagag
tttcttgttggcGATATTTCGCCAGTTAATTTTTATAAACTATATGAGCA
CACGCGGGCGACCTCCGTGATATACACTATGCAAAAATTCTACTTACACC
CCCCCCCAATACATTGAACGTATGTAATGTAGCAATACATTGAACGTATG
TAGACGCAAATCAAGTTATAAGCTATCAAGTTAGAACAGAAGAGGAAAAC
CATACGATTCTTGCTTATTTACTCATTCATTGACTCGTTCATtcatccat
tcattcattcatccattCAGTCTGAAGATCCCCCAAGCAAACGACAAAAG
ATTGCATAAACAAAACACGTACACACACTTATAATAAACAGGTACTCTCC
CTCCCACCCTGACTTTTACTCCCTCCCCCACCCTGACTTTTACTACCTCT
CCCACCCTAACTTTTACTCCCTCTCCCACCCTGACTTTACTCCCTCTCCC
ACCCTGACTTTTACTACCTCTCCCACCCTAACTTTACTCCCTCTCCCACC
CTGACTTTTACTCCTTTCCAGTAGGTCacagaaaaatgagaaaatgagaa
aaatatacATGAGAGAGATATACATTTTTTGTCATTTCCAGTCAATGTTG
AagccaatttcaaaaaaaggcCTAATCTTTTTTTACGTAAACATGAATTT
GAGGATTCTcttaaaaaaagattgaaaactcGAAGAGCTGTTACAATCTG
CTCTCTTCTTTCGCAGAGGGGGGACTGAAAAAATATGTCGTAgtttaatt
gttttcttttttttcttatcaTTCTCAGAATTAATTTTGGGTGACGGTAT
GTAATTTTTTTGGTGTTGACGAAAAAAATGACtgaattttatttataaaa
tggACATgtctaattttattttttagaaaaagaaaaatctattttatttt
gttatttatatCAGCAATTaaaattcaaccaaaaatattttaggtatttt
tcagttgatgatttgttttttatgaaagtaagtttgaaaaattcgGTTTC
AggtttatgttttaaaatttgcTTTTTGAGGAACATCTTTTATTATTGAA
GGATTATTTTccctgttttttttatttctaaattcTCTTTTTCAATTTAG
AAACCTTTCGCACTTAAGAACCATGATACTAATTTTTAGGGATTtctaga
tttttaaaagaatagtaaaattgataaaaaattgaaagataaaGATCTAA
TAGTGACattgcaaaaatttttcttttttctgtttgAAACCATCcccatt
taaattttttttctgtttttaggtttgagatattttaagCTTTTAGTCAC
CCAATACTCCAGTTTTTTACATAACAGCGAGGCTCAAAAACGCTGAGAAA
TGAGAACAGTTAAAGAACAAAGCTGAGCCTGGAATTTCTTAATTTCAAGT
GAgtcaaaaacgtaaaaatttgattgaaacCTAAATTGCCTCTATTTTGA
CCGAAAATAAAACAGTATTACGAGAATTTTGTGCCGCAAGTGCCTCTGCA
AAAATTTAGGCCTTTAAAAACAATTGTAGcattttttgatagtttttccN
GCCGCAAGTGCCTCTGCAAAAATTTAGGCCTTTAAAAACAATTGTAGCat
tttttggtagtttttccttTTAGTTTTCTTAGATCTTTATTGTTACgttg
ttctcattttttttaattgggccattccaataaatctccatacagggggg
ggggtggacgtATAGTATAGGTATGTGTGAATACCCtctgg Coding sequence (CDS) from alignment at sc0000306:250672..255312+ >TCONS_00018786 ID=TCONS_00018786|Name=TCONS_00018786|organism=Clytia hemisphaerica|type=CDS|length=3060bp|location=Sequence derived from alignment at sc0000306:250672..255312+ (Clytia hemisphaerica) GCATGTGGTGTTGTTCCCAGTCCTTTTGATTGTTACCTTGCCAACCGTGG TGCTAAAACATTGAAAGTGCGCATGCTCCAACATCAAAAGAACGCAATGG CCGTTGCTAAGGCTTTAGAAGCCCATCCATTGGTTGAACGTGTTTATTAC CCAGGATTGAAGAGCCATCCAGCTCATGAATTGGTCAAACGACAATGCAC TGGCTTCAGTGGTATGGTTTCCATGGTCATCAAAGGAAATTTGGAAACCG CTTCCAATTTCATGAAAGCATTAAAGGTGTTCACTTTGGCCGAAAGTTTG GGAGGATTTGAGAGCTTAATCGAGCACCCCGCTATTATGACCCACGCTTC AGTTCCAGAAGATCAACGAACAAAACTCGGAATTACTGATACTTTCTTGA GAATGTCAGTTGGGCTAGAGGAAGCAGAAGACCTCGTCGCTGATATTGAA CAAGCTTTAGCTGCTGCCAACTCTGAAGATCCCCCAAGCAAACGACAAAA GATTGCATAAGCATGTGGTGTTGTTCCCAGTCCTTTTGATTGTTACCTTG CCAACCGTGGTGCTAAAACATTGAAAGTGCGCATGCTCCAACATCAAAAG AACGCAATGGCCGTTGCTAAGGCTTTAGAAGCCCATCCATTGGTTGAACG TGTTTATTACCCAGGATTGAAGAGCCATCCAGCTCATGAATTGGTCAAAC GACAATGCACTGGCTTCAGTGGTATGGTTTCCATGGTCATCAAAGGAAAT TTGGAAACCGCTTCCAATTTCATGAAAGCATTAAAGGTGTTCACTTTGGC CGAAAGTTTGGGAGGATTTGAGAGCTTAATCGAGCACCCCGCTATTATGA CCCACGCTTCAGTTCCAGAAGATCAACGAACAAAACTCGGAATTACTGAT ACTTTCTTGAGAATGTCAGTTGGGCTAGAGGAAGCAGAAGACCTCGTCGC TGATATTGAACAAGCTTTAGCTGCTGCCAACTCTGAAGATCCCCCAAGCA AACGACAAAAGATTGCATAAGCATGTGGTGTTGTTCCCAGTCCTTTTGAT TGTTACCTTGCCAACCGTGGTGCTAAAACATTGAAAGTGCGCATGCTCCA ACATCAAAAGAACGCAATGGCCGTTGCTAAGGCTTTAGAAGCCCATCCAT TGGTTGAACGTGTTTATTACCCAGGATTGAAGAGCCATCCAGCTCATGAA TTGGTCAAACGACAATGCACTGGCTTCAGTGGTATGGTTTCCATGGTCAT CAAAGGAAATTTGGAAACCGCTTCCAATTTCATGAAAGCATTAAAGGTGT TCACTTTGGCCGAAAGTTTGGGAGGATTTGAGAGCTTAATCGAGCACCCC GCTATTATGACCCACGCTTCAGTTCCAGAAGATCAACGAACAAAACTCGG AATTACTGATACTTTCTTGAGAATGTCAGTTGGGCTAGAGGAAGCAGAAG ACCTCGTCGCTGATATTGAACAAGCTTTAGCTGCTGCCAACTCTGAAGAT CCCCCAAGCAAACGACAAAAGATTGCATAAGCATGTGGTGTTGTTCCCAG TCCTTTTGATTGTTACCTTGCCAACCGTGGTGCTAAAACATTGAAAGTGC GCATGCTCCAACATCAAAAGAACGCAATGGCCGTTGCTAAGGCTTTAGAA GCCCATCCATTGGTTGAACGTGTTTATTACCCAGGATTGAAGAGCCATCC AGCTCATGAATTGGTCAAACGACAATGCACTGGCTTCAGTGGTATGGTTT CCATGGTCATCAAAGGAAATTTGGAAACCGCTTCCAATTTCATGAAAGCA TTAAAGGTGTTCACTTTGGCCGAAAGTTTGGGAGGATTTGAGAGCTTAAT CGAGCACCCCGCTATTATGACCCACGCTTCAGTTCCAGAAGATCAACGAA CAAAACTCGGAATTACTGATACTTTCTTGAGAATGTCAGTTGGGCTAGAG GAAGCAGAAGACCTCGTCGCTGATATTGAACAAGCTTTAGCTGCTGCCAA CTCTGAAGATCCCCCAAGCAAACGACAAAAGATTGCATAAGCATGTGGTG TTGTTCCCAGTCCTTTTGATTGTTACCTTGCCAACCGTGGTGCTAAAACA TTGAAAGTGCGCATGCTCCAACATCAAAAGAACGCAATGGCCGTTGCTAA GGCTTTAGAAGCCCATCCATTGGTTGAACGTGTTTATTACCCAGGATTGA AGAGCCATCCAGCTCATGAATTGGTCAAACGACAATGCACTGGCTTCAGT GGTATGGTTTCCATGGTCATCAAAGGAAATTTGGAAACCGCTTCCAATTT CATGAAAGCATTAAAGGTGTTCACTTTGGCCGAAAGTTTGGGAGGATTTG AGAGCTTAATCGAGCACCCCGCTATTATGACCCACGCTTCAGTTCCAGAA GATCAACGAACAAAACTCGGAATTACTGATACTTTCTTGAGAATGTCAGT TGGGCTAGAGGAAGCAGAAGACCTCGTCGCTGATATTGAACAAGCTTTAG CTGCTGCCAACTCTGAAGATCCCCCAAGCAAACGACAAAAGATTGCATAA GCATGTGGTGTTGTTCCCAGTCCTTTTGATTGTTACCTTGCCAACCGTGG TGCTAAAACATTGAAAGTGCGCATGCTCCAACATCAAAAGAACGCAATGG CCGTTGCTAAGGCTTTAGAAGCCCATCCATTGGTTGAACGTGTTTATTAC CCAGGATTGAAGAGCCATCCAGCTCATGAATTGGTCAAACGACAATGCAC TGGCTTCAGTGGTATGGTTTCCATGGTCATCAAAGGAAATTTGGAAACCG CTTCCAATTTCATGAAAGCATTAAAGGTGTTCACTTTGGCCGAAAGTTTG GGAGGATTTGAGAGCTTAATCGAGCACCCCGCTATTATGACCCACGCTTC AGTTCCAGAAGATCAACGAACAAAACTCGGAATTACTGATACTTTCTTGA GAATGTCAGTTGGGCTAGAGGAAGCAGAAGACCTCGTCGCTGATATTGAA CAAGCTTTAGCTGCTGCCAACTCTGAAGATCCCCCAAGCAAACGACAAAA GATTGCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00018786-exon-sc0000306-1491911889:250672..250827 | TCONS_00018786-exon-sc0000306-1491911889:250672..250827 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1510915933:250672..250827 | TCONS_00018786-exon-sc0000306-1510915933:250672..250827 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1575043694:250672..250827 | TCONS_00018786-exon-sc0000306-1575043694:250672..250827 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1491911889:251232..251353 | TCONS_00018786-exon-sc0000306-1491911889:251232..251353 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1510915933:251232..251353 | TCONS_00018786-exon-sc0000306-1510915933:251232..251353 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1575043694:251232..251353 | TCONS_00018786-exon-sc0000306-1575043694:251232..251353 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1491911889:251813..251865 | TCONS_00018786-exon-sc0000306-1491911889:251813..251865 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1510915933:251813..251865 | TCONS_00018786-exon-sc0000306-1510915933:251813..251865 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1575043694:251813..251865 | TCONS_00018786-exon-sc0000306-1575043694:251813..251865 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1491911889:252688..252754 | TCONS_00018786-exon-sc0000306-1491911889:252688..252754 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1510915933:252688..252754 | TCONS_00018786-exon-sc0000306-1510915933:252688..252754 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1575043694:252688..252754 | TCONS_00018786-exon-sc0000306-1575043694:252688..252754 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1491911889:253143..253217 | TCONS_00018786-exon-sc0000306-1491911889:253143..253217 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1510915933:253143..253217 | TCONS_00018786-exon-sc0000306-1510915933:253143..253217 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1575043694:253143..253217 | TCONS_00018786-exon-sc0000306-1575043694:253143..253217 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1491911889:253842..253912 | TCONS_00018786-exon-sc0000306-1491911889:253842..253912 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1510915933:253842..253912 | TCONS_00018786-exon-sc0000306-1510915933:253842..253912 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1575043694:253842..253912 | TCONS_00018786-exon-sc0000306-1575043694:253842..253912 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1491911889:254350..255312 | TCONS_00018786-exon-sc0000306-1491911889:254350..255312 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1510915933:254350..255312 | TCONS_00018786-exon-sc0000306-1510915933:254350..255312 | Clytia hemisphaerica | exon |
| TCONS_00018786-exon-sc0000306-1575043694:254350..255312 | TCONS_00018786-exon-sc0000306-1575043694:254350..255312 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000306 | supercontig | sc0000306:250672..255312 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
| IPR000277 | Cys/Met-Metab_PyrdxlP-dep_enz |
| IPR015422 | PyrdxlP-dep_Trfase_sub2 |
| IPR015424 | PyrdxlP-dep_Trfase |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0030170 | pyridoxal phosphate binding |
| GO:0003824 | catalytic activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003824 |
catalytic activity |
| molecular_function |
GO:0030170 |
pyridoxal phosphate binding |
Blast
BLAST of TCONS_00018786 vs. Swiss-Prot (Human)
Match: CGL (Cystathionine gamma-lyase OS=Homo sapiens GN=CTH PE=1 SV=3) HSP 1 Score: 198.749 bits (504), Expect = 2.154e-57 Identity = 107/161 (66.46%), Postives = 127/161 (78.88%), Query Frame = 3
Query: 9 GVVPSPFDCYLANRGAKTLKVRMLQHQKNAMAVAKALEAHPLVERVYYPGLKSHPAHELVKRQCTGFSGMVSMVIKGNLETASNFMKALKVFTLAESLGGFESLIEHPAIMTHASVPEDQRTKLGITDTFLRMSVGLEEAEDLVADIEQALAAANSEDPPS 491
G VPSP DCYL NRG KTL VRM +H KN MAVA+ LE++P VE+V YPGL SHP HELVKRQCTG +GMV+ IKG L+ A F+K LK+FTLAESLGGFESL E PAIMTHASV ++ R LGI+DT +R+SVGLE+ EDL+ D++QAL AA+ PPS
Sbjct: 244 GAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAH---PPS 401
The following BLAST results are available for this feature:
|