XLOC_009084 (gene) - C. hemisphaerica

Overview
NameXLOC_009084
Unique NameXLOC_009084
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000232:308181..312787+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009084 ID=XLOC_009084|Name=XLOC_009084|organism=Clytia hemisphaerica|type=gene|length=4607bp|location=Sequence derived from alignment at sc0000232:308181..312787+ (Clytia hemisphaerica)
atgcattttcgctaaacgatatattttctgactgatttttttctcctcgc attgctatctaactttcatcatcaggtaggtccattcagcatctagcttg tttgtGATGCACCTGCTGGATGCCACGTACTGGGTGTTAAACAGGTTTTC GCTCGAGTAGTTTCACTCGAGGCAAATTTTTAATGGGACTGACCTAAATC ATCGGGGGTACCATGCTTCCCTAGCGGAACCTAAGAATTGGGCTGAAACC ATGTGAAAACACCATATCTTGGAAACTGATTTAAATCAAAAAGGTTCATT CAGCTACTATGTGAACAATTATAGTATGTGTAACaattgaaaatcttaaa aagaaTTACTCCAAAGTGGAGAAAATAACATAATATCTGGAAATTCTTCC TCTCAAATAAAaatctcaaataaaaaatttctcatgAAAAAAAATGTGAA TGCTTCGAGTCATTTAAACAAGTAAATTTATTTAAACTGATGTATAAGTT ATATCCAGAAAGATGCAAATTACCTTAGAGGGAACTTTTGgggtcgaaaa aaaaatcaattcccacgaaaattagttttcTTCAGGTACCCATTTTATGG GACGATATACCCTTTTGAAcactgaaaacagttactccataGTGGGGGTG GAGATGATAAAGATTTTTCAACTTGGCAGTTACTCATCTTAGTGTCATTG AGTAACTACGCGATCCCCCTATTTGAATCAATAATTCTTTCTTCTGTTAG GTATAAACAAGATGGATGTAGTTGTCAACATATTACGTTCCATTCCTTTC ATCAGAGGACCATATGATTATATAGCAAGCATTGAAACACACATGGTAAA CCTTCGTTTTATTTCCTTCTTTCCTTTcgatgggcttttccagaaaaaat tttacgtatcgaaccccctggatatcctactttattagtaaaaaccccct ggatatccactcttaaaaacaTGCTCAACCTCTTGGATATCCTCTCTTtc aaagatgcttacccctggatatcgtattttttacttgaaaagacacttta cccccctggatatccgctcccttgtagatatttaaccccctggatatcca cttttgaacaaaaatcgttaaccccctcgatatccgatatcctcaacagg ggggcacggactatttctggaaaagcccaatcgtATTCAGTACTCATTAG ATTAtgcatttgtttttcttttccagttttTAAGTTGTATCTTTCTCATC TCTTTCCAGGATTATGAAGGTCAAAGGAAAGCAGAGAAGATTTATCAAGT TATTTTAACAGTGTTTGGGGTGAGTTTGATCAGCTTTTAATACTGACATA ATAATTATGCTAATTTGTAGGAGAGTTGgtatttattgatttttccaATT AACTCGGacaatattcgattgtgttttcCATTTCCTCTAATATCCTCAAA TAAGTTGCGAGTAAAATTACAAATGAGAAAAAGTTTTGATATAAATCGAA TTAGATTGACGATCTTGTGTTCTTTGAAAAGATTATTGTGACGGAAATAT TATCATANATCTTTCTCATCTCTTTCCAGGATTATGAAGGTCAAAGGAAA GCAGAGAAGATTTATCAAGTTATTTTAACAGTGTTTGGGGTGAGTTTGAT TAGCTTTTAATACTGACATAATAATTATGCTAATTTGTAGGGGAGTTGgt atttattgatttttccaACAGAATTGGTGCTTCTTTAACTCGGacaatat tcgattgtgttttcCATTTCCTCTAATATCCTCAAATAAGTTGCgagtaa aattaaaaatgcgATTAACTTTTGATATAAATCGAATTAGATTGACGATC TTGTGTTCTTTGAAAAGATTATTGTGACGGGAATATTATCATATTTAAaa atcatagtgtcctccagggtttgttccctcaccaaattctagattttttt aaattcccccccccctctttttttccccctattacttttcagtttttcag ttttccccctcttttttgctttccccccagaaaattctgaaaatatcagt tccccccatatacccatataaatttctcaaatttcaacctacATTACGGT TTTTATGCCTAGtgaatttttcaatcatgatctaatcacatgatatcata GAAGAACCTTTTTTAAAATCTGTAAAGTCGACCCGGGTCTGACATCTAGA ACCAtctcttttgattgaatgaatattgaaaacattttcacaaTGCTGAA TTGTGAGATTGAAAATTTACTGAAGTAAATTCATAGGATAATTCAAacag aagttgattttttatctATTCTTCATTGCcaccttttttcaaaagttttt cacagCATAACATCCCTCTCCGGATTATCTTTTCAAGAAACAAACACAAA ATGGCTTAAAAACTTGCTCTAATGTTCCTTGGAATATACAAAAAACCAAG TTATCCTTGAGAAATTAAAAAACAGGTGATTTTCCTggagaaataaaaaa agcaattgcctttctttaagaaattttccttgagaaatacaagaAACAAG CGATTTTTTTCTCGAGAATCAACAAAAGACAAGAATTTAGATATAAGACA ATAAGTAagtgattttccttgaagaatacaAACAACCATAAATGAATTTC CTTAGGAAATACAAAAAACGTTTCCCTTGAGAAATAAAGGAGCAAGCGAT TTTCCTCGAAGGAGACAAGAAAACACAagtgattttccttgagttTATGG TACTCATAAAAAGCtatctttctttaaaaatacaataaatcTGAAACGAA TAACTAGTTTCCTTTAGCAAATTTGCCATCTTTCttgtcttgaaaaaaaa atatataagtgAATTTCCTTTCTGTCTACTGGCTTTCTTGAGACACAAAA AATGTAGTCATTTTGCCTGAGCAAGAAATACGTGATTTTCCCTAAGaaat tcattttccttgagaattTATACAAAAAACAAGCGATTTTAATTTAGAAA CAAGAAGTCATTAGTCAGTCATTAGTAAATTTGTTTtgggaaatacaaaa aaagtaGTCATTTCTATTGAGTCAATCAATAATAATCTTATGatatcaac ttgaaaaatacaagCAAACTTTTGACTTGTCTTAGGTAAAGCAAATAAAG caaattattttgtaaatttcttcgggaaaattataaaaaccAACTAACTT CTCTCGGAAAacgcaaaaaataaataaataattgcattagaaatattcaa atcaaACGATCAATCGATTACTAGACTCGCCCAATTTCCATGTATAATAA TTAGTGGTTTTCCTCAAAAAGGAAGGAAAAGTTGAGCAATTTTTTTGGGT TGAAAATTTTCGGGTGTGGTTTTGTTTGTTGACATTTTTCTAATGCTCTT ACTTTTTACAGGTGTAACGAATTTACAAGAAACTTTCACTAAAGATTAAT TCTTAAATCTCGCACGAGtacaaaataatttattataTAGTCTTTTTTTT ATTGCGTTTAGATCGTTGGATTCATCTGGGGCTTTGCAATTCAACAATTA TCTGCGGCTGTTTATACCGTTCTTGCTGGCTTTGCTCTCTCTTGTTTGGT AAGTTTCTACAATAGCTCATTCGTCTCCTCTTCTTCCcctttcatcaaaa tttaaaacaccCCAGTGCCACAGACCCTTTAGACCTGCCCCACTGGAAGA TTTGACCAAAATCTCGTCcttggtgggaaaaataccctacaatttcatcc ccactgtgggagaaagttccaccggggctgtgagacaggagcgtatttta aagaaaatacaaaCGAATTCAGTGTATGTAATTTGTGTGTGGAGGttatt acacccccttctcacagacacaCTGGGAACTCTTctcactgaaaaaattg gcaaaaatatcgtccccagtggaaaattatactctaatatttgtccccgc tgaaaataaccagataagcaaaccctcactgcaaaatattgtgctaattc ttccatccccactgaaagtccccagccataaaaaatatgggaatatcaat cacgagttttggtccgttatttttacccccattggctacgaaatcccacc gggtctgtgagaagggggtgtgttaTTGAACATAGAACCCATATAGAATT TTGACGTAAGACTGTCTTCAATTACACGGGTTGTGGTGATGAAGTATATT TCTCTTGTAGATTACATTACCACCTTGGTCATTCTTTCGACGAAATCCTT TGGAATGGATGCCTGATCAAAGTGAAGTCAAAGAAAAGAGCAATAAGAAG ACTCAATCGCAAGAATCCAAGAAAAAGAAGTGATCTTCCTTTAAGCTCTT ATCAATTTTATCATTATtatgtaattttcatttttttatttatcattGAT AAGATAAACTGGTAACGGACTTGATCTcgtatactttttattgctctACT TCcaagattcaaaataaaataaacattcTCAGTACTGCGTGCACCACAAT CAATTTTCTCAAgttctaccgggtgcgccacaaaaaagtttctctcttta aaactgattttctagaaatctaagaattttaaaagagccattcctatttc attggaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016255TCONS_00016255Clytia hemisphaericatranscript
TCONS_00016256TCONS_00016256Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016256-proteinTCONS_00016256-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000232supercontigsc0000232:308181..312787 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
110.91 113.69 113.91 112.59 67.71 55.35 94.2 90.4 76.61 75 50.95 65.7 51.23 39.5 49.36 51.83 44.57 49.66 26.24 35.34 44.1 44.59 57.18 53.17 46.46 49.75 39.75 41.44 41.74 36.8