XLOC_008804 (gene) - C. hemisphaerica

Overview
NameXLOC_008804
Unique NameXLOC_008804
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000216:80218..90267-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008804 ID=XLOC_008804|Name=XLOC_008804|organism=Clytia hemisphaerica|type=gene|length=10050bp|location=Sequence derived from alignment at sc0000216:80218..90267- (Clytia hemisphaerica)
ATTAAATGCCCTGAATGTCGAGAAGAAACCAAGGTTTGTTTCAATATTTT
ACTGATCTTACTGAATATTACTTTTACTATAAGATCATAATAAAAACATC
ATAAAACATCACTGGTGTCTGAGTTATTACTAAGAATAATGAATTTGGAG
TTTGTGGTATCAAAACTCGTTGTTTCAACGATATAAGAAATTTCATGTAT
ATTTTCTTTACCAAAAAAAAGGACATTGGTGAAATGAGGGCCAAAAAAGC
TCTAAAGAATCATCATTACTTCTCGCAAATTCTCAAATCTAAGTGTCCTT
TGATAGTAGTCAACAGTAATAATCTTTTATATTATTTGAGATAAAATAGT
GGAAAAATACGAAAGTACATTGGTTAAAACAAATAAATTACCGAATGTTA
TCAGTTGCTTCCAATAAATACCCTTGAACTGTCGGTACACGAAATTGTGC
CCACTAAAATGGCTGGTGTGGAAGTTGGAGAAGAGATGTGCTTCATGATA
GTTAAAAGTAATCACTTTTTATATTCTTTTAGATAAAAAAAGTGGAAAAA
ATACAAAAATATAAAATGAAAAAGTAAACAAGAAGCCCGTTGGGCGTGAA
GGCCCAGCGAAAAGTAACGTGTTGAAAACAAGCGTGCAAAACAGCAAATG
TATGACCCCGTTGACATGGATCAAAGTGAAGACAGGAAAAAAATTTTCAA
AATCACCGTGGTACTTCTCATTGGTTAGACGCTTGAAATTTTATTGAATG
GTCTCCTAACAACCGGGCCTACACAGGCGCAGGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCATTTTAAAAAGGCTCCTTTCCAGCGGCCATTTTGTTTAGAAATG
AGCCTGTGTTTTCATTTTCATTTGTTCATCTTTTTTCACAAGGTCAGCTT
TTTCCCTAAATTATGCGCGCCCATAGAAAAATATAAAAAAATTCCCCGAA
TATTCTGCTTAGTGAGTGGGCACTTTTTAACGAATTAGGTGCACTCACAT
ATACAGGGAGAAATATCCTTGCAGGCATGTTAGTTGGACCAGACCGTAGA
CCAGAAAAATGATCTTTAAAGAACTAGACGGTGGAATAGTTTTTATGGTC
TGCATATCCAAGCTAATAAAATTCATGTGGTTAATGTGAGTTAACAGTTA
ATGCGAAGATCCAGAAATGACCATTTTCACTGTTCATNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCGACCGCCATCTTGTTTTGTTTTGAAAATTGTTTTTGAAAGAGC
GCGGAATCAGAAAATATATCTTTTGTAGCCAGTATCCGACTTTAGCAACC
TTTTCCCTCTCGAAACGGCAAAATTAAAAAGTGTGGTACTGGTTTTAAGC
GCCGTTTCTATCAAAACGGACGGACAGACAGCGGAAGGACGGACGGAAAG
TTGCAAATGAAAGGCCCTATCGCTAGCGCTGGGCCAATAACATAATACTA
TCAGCTGCTTCCAATAAATAATCCTGAACAGTCACTAGAATGGCTGGTGT
GGAAGTTGGACAAGAGTTGGAATGTTGCGTTTGTCTGGATCAATTTGTAA
AACCAAAGCTTTTGAATTGTATGCACACTTTATGTGAGGGATGCATCGAC
AAACTGATTCAGACTGGAACTATTAAATGCCCTGAATGTCGAGAATAAAC
CAAGGTTTGTTTCAATATTTTACTGATCTTACTAAATATTACTTTTACCA
CTTCTATAAGATCAATCATAAAACATCACTGGTGTCTGTGATCGATACAG
TACGGTCAGAACAATACACCTATCAACCTTAAACAGCAAGGTCATGAGGA
GACTGGTAACAAATTTACAGAAAACTCTTTTCAACACGTTGCATTTCCAA
TCTTCAAACGAAATCAACACAGAAGCTTATTCTACCCAAGACTATATTCC
AGTTGAGGGAATCTTTGCGGTGGAGCGCAAACAATATCTAGCTGTTCCTG
CGTTTGAATTGAGCCATTCGCCTATAGATTGACATAAAAATGATGATATA
ATTATAAAAGGTGTGCACATAGAAGGTGTCGTCAGTGTTTTTTTAGCTCT
ATGTTTAAGCGATTTAGATCACAACCAATAGATTTAAATAGACTAAATTA
AGAAGACTGCTTGACAGGACAATTAGTACGAATCACTAAGGATTAGTACT
CTTACTACGACTGTAACTTTGCAATTTTGATAAGTCTCCTCTCAAGCTTG
CTGTGTCGCTTAACTGTTTATAGATGTATATAGATTACTTATCTATGTTA
TAGGTCCCAAATGGTGCATCTGAGCTATCTACCAATTATATTGCACAAAA
TATCATCGACAAAGTGAAAAATGCTGCAAGAAAGGCCCTTTCTGTCAAGA
TTGTGTCGCCGAGTCTCCTGCTTCAAACCATTGCGAAACTTGTGTTTTGA
ATTTATGTCAAAGATGCACAAAGTACCATCAAGAATGTGTCAGGTTTGTA
AGTCATAAAATTATTGACATACAAAATGTATCTAAGAAGATTTCTAGTTC
GAAGCGTTACTATCCGAAACATAATGAGCTGTTGAAATATTTTTGCCAGC
AATGCAAGGTTGTCGTATGTAATGATTGTTGTATGATAAGTGCACAACAT
AAAAATCATGATATTACATTGGTGTCGGAAGCTATCGACAAAGCCAAAGA
AGAATTAAATCAAAAGCTCAAAAAGATGAGAGAGAGTGAGTTAACAATGG
TTGAATGCCTTGGAAAAGTCAAAGAATTTCACCAAAAAATTGCTGCAGAA
GAGGAAAACAATGCTAATATGATCAAACAAGCTTTTAATGAAATAAGATT
TGTTCTTGCCAAGAAGGAAGAAGAACTGGTAAAACAGCTTGCAACAATTA
GAGCAGACAAAAAGGAGAAGCTTAAATTGGACAGATTTTCATCAGCAACC
AGCAAAGTTTCCCAATCTGTACAATACGTTGAATCTATCCTGAATGAAAA
TTGTGATGATCTAGATATCATATGTGATCTCACAAAACAATTGGATGAAA
TCTGCAAGGAATATAGTTTGAATGGTACGTTTATTGTATCTTCTACACCT
CTACCTTTATATTTGCAACTGAAAGGAAAATCAACGAAACCACCTCTTCT
GATCCTCAAGAGTAAGGCAATGTTAACACTGTATCATAAAAATGCGCTCT
CAGGAAGTTCGCTGGGCTTTGATATGAGGCTAAAAAAGTATTCAATCAAT
CCTAGCAGGGATGCATTGATATCTGAGCAAATAGGAGCCTTGTCATTATC
GTAATAATTTGTATAACAATATTGGATGATAATTATAAACAAAATAACTA
AAACAATGATGCATACACAATCATATATATATGATTGATCGTATATTTTA
CAAATATTTGTTGTTGTTTTTTATCCTATTTTTATTACCACAATTGATAT
TCTATCATTATTATATTCACACCAATCCAAAGTAATCTTAAAAACTGTAA
ATTTATGCTCCGTCAATCCTGTAGAATTATAAGAGAAAATACATACATCT
TTAAGGGAAAGTATGAATGTAAATTTTTCCTATCAAAGTTACTAGGTTGC
TATGTTTATACATTAATTTTTAGAATTTTTCTATAAAATGCGATTTATTT
AGCACAGAGTGCCTATGGATATATTTTTCAAGGGTCTTTTTTTAATTCCG
GTATTTGAAAGACAACAATCTTCATAAACGTTAAATTTTATTTTTCAGTA
ACGAAATTCTTACAATTAATACTGTGCTTATTACTTGTTCATTATTGTTT
CATTGTTTTGTTGTTTTGTTGTTTTGTTTGGGGTATCAAAATATTAATGA
ATTTGAAAGATGCATGAGAGTTACAAAGTTACTTTTATGGTCGTATCAAC
CCTTAGGATAAATCGGTATTCAGTCATTGTTTCAATGCTGTCAAGAATTT
AATGAATAACTGCTTTACACAAAAGAAGAAATTTTGTGAAATTTGCGTTG
AAAAAGCTCTGCAAAATTGTCACTTCTTCTCGCAAATTCTAAAATCTATG
TGTCCCTTGATAATTTTCAACAGTAATAATCTTTTGCATTCTTTTAGATA
AAAAGTGGAAAAAATACGAAAATATAAAATGAAAAAGTAAATAACATAAT
ACTATCAGCTGCTTCCAATAAATAATCCTGAACGGTTACTAGAATGGCTG
GTGTGGAAGTTGGACAAGAGTTGGAATGTTGCGTTTGTTTGGATCAATTT
GTAAAACCAAAGCTTTTGAATTGTATGCACACTTTATGTGAGGGATGCAT
CGACAAACTGATTCAGAGTAGAACTGTTAAATGCCCTGAATGTCGAGAAG
AAACCAAGGTTTGTTTCAATATTTTACTGATCTTACTGAATATTACTTTT
ACTGCTTCTATGAGATCAATCAGAGAACATCACTGGTGTTTGTGATCGAT
ACGGTACAGTCAGAACACACCTATCAATCATCCTTAAACAGTACAGTTTT
AGAAAAGCCCCNCGATACGGTACAGTCAGAACACACCTATCAATCATCCT
TAAACAGTACAGTTTTAGAGGAGGCCCCCCAGTGGTTTGCGTGATGGCGT
GATTGGGACTTTTTTCTTGCGTGATGGCGTGATTAGAGATTTTTTTTTGG
CGTGATAGGGCAAAAATTTGAGGCGTGATGCGTGATTTGGGCTATTTTTT
GCTATTTTTTGCGTGATGACAAATTTTAGCGATTTTCTTGATGCGTGATT
GAGAAAATTTTTTTGCGTGATGGCGTGATTAGGGGTGCCGCTGGAGGGGG
CCTCTGAGAGGTAATAAATTCACAGGAAATTCTCATTTTCAAGCGACATC
TTCAAACGAAAGCAGCACAGAAGCTTATTCTAGCACAAACTCTATTCTCG
CTGAGGGAATCTTTGCGTTGGAGCGCAAATAATCTCTACCTGTTCCTATT
TTAATTGAGCCATTTGCCTATAGATAGACATATGTATGATACAATTATAA
AAGATGTGCACATAGAAGGTGTTGTCGGTGCTTTTTTTAGCTCTATGTTT
TTTAAGGTATGTGTTCACCTTTCTTGACACATTCTCTTTAATTGATCATA
TCTTTAGAACAACAAATTTTTGGACCTACCTGGAGGTCCTATAAATTAAC
CTATGTTCGTCCGTCCGTCTGTTACCAGCTTTTCTCGAGATTGGCTCATT
AGTTTTTTCTGATTTTTGGCACAAAGATGCAAAATGGCAATGCCCAAAAT
GTGACGGAGCCCGATTTTCGAAAAAAAAAATTTCCGGCCGAAAATAACGG
AAATATGCCGGAAAAACCGGTTTTTTGACATTTTCTCGAGATTTCATCAT
TAGTTTTTTCTGATGTTTTGCTTAAAGATGCGTATTAACAATGCCCAAAA
CATGACCGGGTCCGATTTTTGAGAAAAAAATTTTTCCAGCTGAAAATGCC
GGAAATATGCCGGAAATCACCGTTTTTCTGAATTTTCATTAGACTTTTTC
CTTATAATTGGTTGTTTTTTCCTTCAAAAACATTATTAATAGCAATGCCC
ACCATCAAGCATTTTTCAATTTTCAATAGAATTGATTTTTGAAGTCGGAA
CTATTAAAAAATCGCCGGAACAACCTCTATTCGCCGGAAAGACAGTATTT
CTTGAATTTCTCGAGCTGTACTTTATATTTTTTTATGAAATTTTGCACAC
TGATGCAAAATGACAGTACCTAAAGTGTGACAGAGCCCGATTTTCGAAAA
ACATTTTTTTCCGGCTGAAAATGCCGGGAATATGCCGGAAAACCGGTTTT
TTTGACATTTTCTCGAATTTTCATCCTTAGTTTTTTTCTGATTTTTTGCA
GAAAGATGCGTATGCGCATTACTCAAAACATGACAGAGTTCGATTTTTTG
AGAAAATTTTTTTTCCGGCCGAAAATGCCGGAAATCGCCGTTTTTGTTTT
CTAGAAACCTTCTTTATTAAGCTGTGCGTTTTTTCTGATAGTGTATTGTT
TTTATAAAGAAAAGCGTTTAATAACTTTTTACTTTTTTTTCATAAGTATT
TTTCAATAGTATTGATAATTTCTACCAATAGATATGCTTCCATTTTATAT
ATTTTTGTATTTTGACCAGTTATGTCTTATGTGTTTCATTGTTTCAATGT
TCATTGGTTAGTTTTGGTAACCAGGTAGGTCAATAAAAGTATCACTTGTT
ATACATCAAAAGTATATATTTTCTGAAAGCCAATAATATTCTCTTTCTAA
TGGTAAAAGTTTCAGCTGAATTTAAAAAACTGGGCAGGATATAATTANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATAATT
TCGATACTATGTTCCCAATAGATCGAACTAAAAAAGTGTCTTGGGATTTT
TTTTGGAATTGACTTTAACTCTTTAAATCCTAAATTCTGTAAAAACATCG
ATACAAAAGTAAATTAAAATGTGATTTTTTCAGTTATCTGTAAATTGAGG
AAAAACAACTCGGTTAGAAATAAAATCCTAAGACACTTTTTAAGTTTGAT
CTTTTGGGAATCTCATAAAAAAAGAATGAAGTCGATATCTAAATGCTATG
GGTGACTTTAACTTCGTTAAAAGTAGTATGGTGTGTTAAAATTCCGTTTT
TTTCTACATCAATTTGAAATTTTTAACGAGATGATTGCTGTTTATTTGAT
TAATCAGTGAAATGTGTCAAAAATATTACTATTCAATAGAGGTGAGAATA
AACATCAGCTGAATTCTCTCTTTTGTCTTTGTTGTTTCCGAAAGAGACAA
TTATTTGAGTAAATAATCCATCATAAGACGAACTTTGTTTTGAAATTTAA
ATGGTTATAACTCTAGATCAAAAAAAGATTTTAAGATCGCAATTTTACCA
AAATGAAATCCAGTAACTTTTCTTCCACTTTGACTGAAAAAAATTTTTTT
GACAAAAAATCGGAAAAAAGGTGTACACATACCTTAAGCGATTGAAATAA
TGATAATAGAGTTAAATAGAAATATTAAGAAAATTGCTTCTAGAGTAAAT
CACTCAGGATCAGTACTCTTACTACTACTGTAACTTTACAATTTTTGTAA
GTCTCCTCTCAAGCTTGCCGCGTCGCTTAACTGTTTATAGATGTATGTAT
ATAGATTACTTATCTATGTTATAGGTCCCTAATGGTGCAGCTGAGCTATC
TACCAATTACATTGCACAAAATATTATCGAAAAAGTGAAAAATGCTGCAA
AGAAAGGCCCATTTTGTCAAGATTGTGTCGCCGAGTCTCCAGCTTCAAAC
CATTGCGAAACTTGTGTTTTAAATTTGTGTATAAAATGCACTGAATATCA
TCAGAGTTGTGTGAGGTTTGTAAATCATAAAATTATTGACATACAAAATG
TCACAAAGAAAATCTCTAGTCCGAAACGTTACTGTCCAAAACATAATGAG
CTGTTGAAATATTTTTGCCAGCAATGCAAGGTGGTTGTTTGTACTGATTG
TATGGTCAGTGTAGAGCACAAACAACATAACATCTCCTTGGTGTCAGAAA
CTACTGCCAAAGCTAAAGAGGAATTGAAGCAAAAACTTGAAAAGATGAAA
GACAAGAAGCAAACAATGGGTAATTGTCTCCAACAAGCAAAGTCTTTTTA
TAAAGATGTTATAGATGAAGATATAGCGAGCGTTGAATTAATCAAGAAAA
CTTTCAACGAAGCGCGAAGTATTCTCGCTGAAAAGGAAGAGCAGCTCATT
GCTCAAGTTCAAGCCCAAAGCATGTCAAAAGGTGAAAATAAGCTTAATCT
TGATAAATTCTCAAAGGCTGTTCATGCAGTCACTCAGACAGCAAATTATG
TGGAATCTGTCGTAAAGGAAAATTGTGATGATCTGGAGATGATTAGTGAA
ATGTCCAAATAGATGGATAAAGTCTTCCAAGAATATTATCTTGATGAACC
CATTACACTCATTTTCCAGTGGGCCTTCACTATTCTTCAGAAAATTCTTT
TTTCTGCAGAGCTCCCAATGTAATCAGATTTTCTGTGAATCATCGAATAC
CATGAATGTTACGCAAACAATATATGAAAAGTTCTAGGCAAAAGCCCACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015764TCONS_00015764Clytia hemisphaericatranscript
TCONS_00015763TCONS_00015763Clytia hemisphaericatranscript
TCONS_00015762TCONS_00015762Clytia hemisphaericatranscript
TCONS_00015761TCONS_00015761Clytia hemisphaericatranscript
TCONS_00015760TCONS_00015760Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015762-proteinTCONS_00015762-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000216supercontigsc0000216:80218..90267 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.64	10.62	4.63	2.83	5.47	2.7	3.43	3.56	5.07	6.82	3.69	5.3	8.64	4.99	23.18	18.56	12.43	13.78	16.48	19.8	7.94	7.44	13.96	15.29	3.68	4.88	7.28	5.31	8.14	6.55