TCONS_00015762 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015762
Unique NameTCONS_00015762
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length959

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015762 ID=TCONS_00015762|Name=TCONS_00015762|organism=Clytia hemisphaerica|type=transcript|length=959bp
atTAAATGCCCTGAATGTCGAGAAGAAACCAAGGTCCCAAATGGTGCATC
TGAGCTATCTACCAATTATATTGCACAAAATATTatcgaaaaagtgaaaa
atgctgCAAAGAAAGGCCCATTTTGTCAAGATTGTGTCGCCGAGTCTCCA
GCTTCAAACCATTGCGAAACTTGTGTTTTAAATTTGTGTATAAAATGCAC
TGAATATCATCAGAGTTGTGTGAGGTTTGTAAATCATAAAATTATTGACA
TACAAAATGTCACAAAGAAAATCTCTAGTCCGAAACGTTACTGTCCAAAA
CATAATGAgctgttgaaatatttttgccAGCAATGCAAGGTGGTTGTTTG
TACTGATTGTATGGTCAGTGTAGAGCACAAACAACATAACATCTCCTTGG
TGTCAGAAACTACTGCCAAAGCTAAAGAGGAATTGAAGCAAAAACTTGAA
AAGATGAAAGACAAGAAGCAAACAATGGGTAATTGTCTCCAACAAGCAAA
GTCTTTTTATAAAGATGTTATAGATGAAGATATAGCGAGCGTTGAATTAA
TCAAGAAAACTTTCAACGAAGCGCGAAGTATTCTCGCTGAAAAGGAAGAG
CAGCTCATTGCTCAAGTTCAAGCCCAAAGCATgtcaaaaggtgaaaataa
gcTTAATCTTGATAAATTCTCAAAGGCTGTTCATGCAGTCACTCAGACAG
CAAATTATGTGGAATCTGTCGTAAAGGAAAATTGTGATGATCTGGAGATG
ATTAGTGAAATGTCCAAATAGATGGATAAAGTCTTCCAAGAATATTATCT
TGATGAACCCATTACACTCATTTTCCAGTGGGCCTTCACTATTCttcaga
aaattcttttttctgcAGAGCTCCCAATGTAATCAGATTTTCTGTGAATC
ATCGAATACCATGAATGTTACGCAAACAATATATGAAAAGTTCTAGGCAA
AAGCCCACT
Run BLAST on NCBI

protein sequence of TCONS_00015762-protein

>TCONS_00015762-protein ID=TCONS_00015762-protein|Name=TCONS_00015762-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
IKCPECREETKVPNGASELSTNYIAQNIIEKVKNAAKKGPFCQDCVAESP
ASNHCETCVLNLCIKCTEYHQSCVRFVNHKIIDIQNVTKKISSPKRYCPK
HNELLKYFCQQCKVVVCTDCMVSVEHKQHNISLVSETTAKAKEELKQKLE
KMKDKKQTMGNCLQQAKSFYKDVIDEDIASVELIKKTFNEARSILAEKEE
QLIAQVQAQSMSKGENKLNLDKFSKAVHAVTQTANYVESVVKENCDDLEM
ISEMSK
Run BLAST on NCBI

transcript from alignment at sc0000216:80218..90267-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015762 ID=TCONS_00015762|Name=TCONS_00015762|organism=Clytia hemisphaerica|type=transcript|length=10050bp|location=Sequence derived from alignment at sc0000216:80218..90267- (Clytia hemisphaerica)
ATTAAATGCCCTGAATGTCGAGAAGAAACCAAGGTTTGTTTCAATATTTT
ACTGATCTTACTGAATATTACTTTTACTATAAGATCATAATAAAAACATC
ATAAAACATCACTGGTGTCTGAGTTATTACTAAGAATAATGAATTTGGAG
TTTGTGGTATCAAAACTCGTTGTTTCAACGATATAAGAAATTTCATGTAT
ATTTTCTTTACCAAAAAAAAGGACATTGGTGAAATGAGGGCCAAAAAAGC
TCTAAAGAATCATCATTACTTCTCGCAAATTCTCAAATCTAAGTGTCCTT
TGATAGTAGTCAACAGTAATAATCTTTTATATTATTTGAGATAAAATAGT
GGAAAAATACGAAAGTACATTGGTTAAAACAAATAAATTACCGAATGTTA
TCAGTTGCTTCCAATAAATACCCTTGAACTGTCGGTACACGAAATTGTGC
CCACTAAAATGGCTGGTGTGGAAGTTGGAGAAGAGATGTGCTTCATGATA
GTTAAAAGTAATCACTTTTTATATTCTTTTAGATAAAAAAAGTGGAAAAA
ATACAAAAATATAAAATGAAAAAGTAAACAAGAAGCCCGTTGGGCGTGAA
GGCCCAGCGAAAAGTAACGTGTTGAAAACAAGCGTGCAAAACAGCAAATG
TATGACCCCGTTGACATGGATCAAAGTGAAGACAGGAAAAAAATTTTCAA
AATCACCGTGGTACTTCTCATTGGTTAGACGCTTGAAATTTTATTGAATG
GTCTCCTAACAACCGGGCCTACACAGGCGCAGGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCATTTTAAAAAGGCTCCTTTCCAGCGGCCATTTTGTTTAGAAATG
AGCCTGTGTTTTCATTTTCATTTGTTCATCTTTTTTCACAAGGTCAGCTT
TTTCCCTAAATTATGCGCGCCCATAGAAAAATATAAAAAAATTCCCCGAA
TATTCTGCTTAGTGAGTGGGCACTTTTTAACGAATTAGGTGCACTCACAT
ATACAGGGAGAAATATCCTTGCAGGCATGTTAGTTGGACCAGACCGTAGA
CCAGAAAAATGATCTTTAAAGAACTAGACGGTGGAATAGTTTTTATGGTC
TGCATATCCAAGCTAATAAAATTCATGTGGTTAATGTGAGTTAACAGTTA
ATGCGAAGATCCAGAAATGACCATTTTCACTGTTCATNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCGACCGCCATCTTGTTTTGTTTTGAAAATTGTTTTTGAAAGAGC
GCGGAATCAGAAAATATATCTTTTGTAGCCAGTATCCGACTTTAGCAACC
TTTTCCCTCTCGAAACGGCAAAATTAAAAAGTGTGGTACTGGTTTTAAGC
GCCGTTTCTATCAAAACGGACGGACAGACAGCGGAAGGACGGACGGAAAG
TTGCAAATGAAAGGCCCTATCGCTAGCGCTGGGCCAATAACATAATACTA
TCAGCTGCTTCCAATAAATAATCCTGAACAGTCACTAGAATGGCTGGTGT
GGAAGTTGGACAAGAGTTGGAATGTTGCGTTTGTCTGGATCAATTTGTAA
AACCAAAGCTTTTGAATTGTATGCACACTTTATGTGAGGGATGCATCGAC
AAACTGATTCAGACTGGAACTATTAAATGCCCTGAATGTCGAGAATAAAC
CAAGGTTTGTTTCAATATTTTACTGATCTTACTAAATATTACTTTTACCA
CTTCTATAAGATCAATCATAAAACATCACTGGTGTCTGTGATCGATACAG
TACGGTCAGAACAATACACCTATCAACCTTAAACAGCAAGGTCATGAGGA
GACTGGTAACAAATTTACAGAAAACTCTTTTCAACACGTTGCATTTCCAA
TCTTCAAACGAAATCAACACAGAAGCTTATTCTACCCAAGACTATATTCC
AGTTGAGGGAATCTTTGCGGTGGAGCGCAAACAATATCTAGCTGTTCCTG
CGTTTGAATTGAGCCATTCGCCTATAGATTGACATAAAAATGATGATATA
ATTATAAAAGGTGTGCACATAGAAGGTGTCGTCAGTGTTTTTTTAGCTCT
ATGTTTAAGCGATTTAGATCACAACCAATAGATTTAAATAGACTAAATTA
AGAAGACTGCTTGACAGGACAATTAGTACGAATCACTAAGGATTAGTACT
CTTACTACGACTGTAACTTTGCAATTTTGATAAGTCTCCTCTCAAGCTTG
CTGTGTCGCTTAACTGTTTATAGATGTATATAGATTACTTATCTATGTTA
TAGGTCCCAAATGGTGCATCTGAGCTATCTACCAATTATATTGCACAAAA
TATCATCGACAAAGTGAAAAATGCTGCAAGAAAGGCCCTTTCTGTCAAGA
TTGTGTCGCCGAGTCTCCTGCTTCAAACCATTGCGAAACTTGTGTTTTGA
ATTTATGTCAAAGATGCACAAAGTACCATCAAGAATGTGTCAGGTTTGTA
AGTCATAAAATTATTGACATACAAAATGTATCTAAGAAGATTTCTAGTTC
GAAGCGTTACTATCCGAAACATAATGAGCTGTTGAAATATTTTTGCCAGC
AATGCAAGGTTGTCGTATGTAATGATTGTTGTATGATAAGTGCACAACAT
AAAAATCATGATATTACATTGGTGTCGGAAGCTATCGACAAAGCCAAAGA
AGAATTAAATCAAAAGCTCAAAAAGATGAGAGAGAGTGAGTTAACAATGG
TTGAATGCCTTGGAAAAGTCAAAGAATTTCACCAAAAAATTGCTGCAGAA
GAGGAAAACAATGCTAATATGATCAAACAAGCTTTTAATGAAATAAGATT
TGTTCTTGCCAAGAAGGAAGAAGAACTGGTAAAACAGCTTGCAACAATTA
GAGCAGACAAAAAGGAGAAGCTTAAATTGGACAGATTTTCATCAGCAACC
AGCAAAGTTTCCCAATCTGTACAATACGTTGAATCTATCCTGAATGAAAA
TTGTGATGATCTAGATATCATATGTGATCTCACAAAACAATTGGATGAAA
TCTGCAAGGAATATAGTTTGAATGGTACGTTTATTGTATCTTCTACACCT
CTACCTTTATATTTGCAACTGAAAGGAAAATCAACGAAACCACCTCTTCT
GATCCTCAAGAGTAAGGCAATGTTAACACTGTATCATAAAAATGCGCTCT
CAGGAAGTTCGCTGGGCTTTGATATGAGGCTAAAAAAGTATTCAATCAAT
CCTAGCAGGGATGCATTGATATCTGAGCAAATAGGAGCCTTGTCATTATC
GTAATAATTTGTATAACAATATTGGATGATAATTATAAACAAAATAACTA
AAACAATGATGCATACACAATCATATATATATGATTGATCGTATATTTTA
CAAATATTTGTTGTTGTTTTTTATCCTATTTTTATTACCACAATTGATAT
TCTATCATTATTATATTCACACCAATCCAAAGTAATCTTAAAAACTGTAA
ATTTATGCTCCGTCAATCCTGTAGAATTATAAGAGAAAATACATACATCT
TTAAGGGAAAGTATGAATGTAAATTTTTCCTATCAAAGTTACTAGGTTGC
TATGTTTATACATTAATTTTTAGAATTTTTCTATAAAATGCGATTTATTT
AGCACAGAGTGCCTATGGATATATTTTTCAAGGGTCTTTTTTTAATTCCG
GTATTTGAAAGACAACAATCTTCATAAACGTTAAATTTTATTTTTCAGTA
ACGAAATTCTTACAATTAATACTGTGCTTATTACTTGTTCATTATTGTTT
CATTGTTTTGTTGTTTTGTTGTTTTGTTTGGGGTATCAAAATATTAATGA
ATTTGAAAGATGCATGAGAGTTACAAAGTTACTTTTATGGTCGTATCAAC
CCTTAGGATAAATCGGTATTCAGTCATTGTTTCAATGCTGTCAAGAATTT
AATGAATAACTGCTTTACACAAAAGAAGAAATTTTGTGAAATTTGCGTTG
AAAAAGCTCTGCAAAATTGTCACTTCTTCTCGCAAATTCTAAAATCTATG
TGTCCCTTGATAATTTTCAACAGTAATAATCTTTTGCATTCTTTTAGATA
AAAAGTGGAAAAAATACGAAAATATAAAATGAAAAAGTAAATAACATAAT
ACTATCAGCTGCTTCCAATAAATAATCCTGAACGGTTACTAGAATGGCTG
GTGTGGAAGTTGGACAAGAGTTGGAATGTTGCGTTTGTTTGGATCAATTT
GTAAAACCAAAGCTTTTGAATTGTATGCACACTTTATGTGAGGGATGCAT
CGACAAACTGATTCAGAGTAGAACTGTTAAATGCCCTGAATGTCGAGAAG
AAACCAAGGTTTGTTTCAATATTTTACTGATCTTACTGAATATTACTTTT
ACTGCTTCTATGAGATCAATCAGAGAACATCACTGGTGTTTGTGATCGAT
ACGGTACAGTCAGAACACACCTATCAATCATCCTTAAACAGTACAGTTTT
AGAAAAGCCCCNCGATACGGTACAGTCAGAACACACCTATCAATCATCCT
TAAACAGTACAGTTTTAGAGGAGGCCCCCCAGTGGTTTGCGTGATGGCGT
GATTGGGACTTTTTTCTTGCGTGATGGCGTGATTAGAGATTTTTTTTTGG
CGTGATAGGGCAAAAATTTGAGGCGTGATGCGTGATTTGGGCTATTTTTT
GCTATTTTTTGCGTGATGACAAATTTTAGCGATTTTCTTGATGCGTGATT
GAGAAAATTTTTTTGCGTGATGGCGTGATTAGGGGTGCCGCTGGAGGGGG
CCTCTGAGAGGTAATAAATTCACAGGAAATTCTCATTTTCAAGCGACATC
TTCAAACGAAAGCAGCACAGAAGCTTATTCTAGCACAAACTCTATTCTCG
CTGAGGGAATCTTTGCGTTGGAGCGCAAATAATCTCTACCTGTTCCTATT
TTAATTGAGCCATTTGCCTATAGATAGACATATGTATGATACAATTATAA
AAGATGTGCACATAGAAGGTGTTGTCGGTGCTTTTTTTAGCTCTATGTTT
TTTAAGGTATGTGTTCACCTTTCTTGACACATTCTCTTTAATTGATCATA
TCTTTAGAACAACAAATTTTTGGACCTACCTGGAGGTCCTATAAATTAAC
CTATGTTCGTCCGTCCGTCTGTTACCAGCTTTTCTCGAGATTGGCTCATT
AGTTTTTTCTGATTTTTGGCACAAAGATGCAAAATGGCAATGCCCAAAAT
GTGACGGAGCCCGATTTTCGAAAAAAAAAATTTCCGGCCGAAAATAACGG
AAATATGCCGGAAAAACCGGTTTTTTGACATTTTCTCGAGATTTCATCAT
TAGTTTTTTCTGATGTTTTGCTTAAAGATGCGTATTAACAATGCCCAAAA
CATGACCGGGTCCGATTTTTGAGAAAAAAATTTTTCCAGCTGAAAATGCC
GGAAATATGCCGGAAATCACCGTTTTTCTGAATTTTCATTAGACTTTTTC
CTTATAATTGGTTGTTTTTTCCTTCAAAAACATTATTAATAGCAATGCCC
ACCATCAAGCATTTTTCAATTTTCAATAGAATTGATTTTTGAAGTCGGAA
CTATTAAAAAATCGCCGGAACAACCTCTATTCGCCGGAAAGACAGTATTT
CTTGAATTTCTCGAGCTGTACTTTATATTTTTTTATGAAATTTTGCACAC
TGATGCAAAATGACAGTACCTAAAGTGTGACAGAGCCCGATTTTCGAAAA
ACATTTTTTTCCGGCTGAAAATGCCGGGAATATGCCGGAAAACCGGTTTT
TTTGACATTTTCTCGAATTTTCATCCTTAGTTTTTTTCTGATTTTTTGCA
GAAAGATGCGTATGCGCATTACTCAAAACATGACAGAGTTCGATTTTTTG
AGAAAATTTTTTTTCCGGCCGAAAATGCCGGAAATCGCCGTTTTTGTTTT
CTAGAAACCTTCTTTATTAAGCTGTGCGTTTTTTCTGATAGTGTATTGTT
TTTATAAAGAAAAGCGTTTAATAACTTTTTACTTTTTTTTCATAAGTATT
TTTCAATAGTATTGATAATTTCTACCAATAGATATGCTTCCATTTTATAT
ATTTTTGTATTTTGACCAGTTATGTCTTATGTGTTTCATTGTTTCAATGT
TCATTGGTTAGTTTTGGTAACCAGGTAGGTCAATAAAAGTATCACTTGTT
ATACATCAAAAGTATATATTTTCTGAAAGCCAATAATATTCTCTTTCTAA
TGGTAAAAGTTTCAGCTGAATTTAAAAAACTGGGCAGGATATAATTANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATAATT
TCGATACTATGTTCCCAATAGATCGAACTAAAAAAGTGTCTTGGGATTTT
TTTTGGAATTGACTTTAACTCTTTAAATCCTAAATTCTGTAAAAACATCG
ATACAAAAGTAAATTAAAATGTGATTTTTTCAGTTATCTGTAAATTGAGG
AAAAACAACTCGGTTAGAAATAAAATCCTAAGACACTTTTTAAGTTTGAT
CTTTTGGGAATCTCATAAAAAAAGAATGAAGTCGATATCTAAATGCTATG
GGTGACTTTAACTTCGTTAAAAGTAGTATGGTGTGTTAAAATTCCGTTTT
TTTCTACATCAATTTGAAATTTTTAACGAGATGATTGCTGTTTATTTGAT
TAATCAGTGAAATGTGTCAAAAATATTACTATTCAATAGAGGTGAGAATA
AACATCAGCTGAATTCTCTCTTTTGTCTTTGTTGTTTCCGAAAGAGACAA
TTATTTGAGTAAATAATCCATCATAAGACGAACTTTGTTTTGAAATTTAA
ATGGTTATAACTCTAGATCAAAAAAAGATTTTAAGATCGCAATTTTACCA
AAATGAAATCCAGTAACTTTTCTTCCACTTTGACTGAAAAAAATTTTTTT
GACAAAAAATCGGAAAAAAGGTGTACACATACCTTAAGCGATTGAAATAA
TGATAATAGAGTTAAATAGAAATATTAAGAAAATTGCTTCTAGAGTAAAT
CACTCAGGATCAGTACTCTTACTACTACTGTAACTTTACAATTTTTGTAA
GTCTCCTCTCAAGCTTGCCGCGTCGCTTAACTGTTTATAGATGTATGTAT
ATAGATTACTTATCTATGTTATAGGTCCCTAATGGTGCAGCTGAGCTATC
TACCAATTACATTGCACAAAATATTATCGAAAAAGTGAAAAATGCTGCAA
AGAAAGGCCCATTTTGTCAAGATTGTGTCGCCGAGTCTCCAGCTTCAAAC
CATTGCGAAACTTGTGTTTTAAATTTGTGTATAAAATGCACTGAATATCA
TCAGAGTTGTGTGAGGTTTGTAAATCATAAAATTATTGACATACAAAATG
TCACAAAGAAAATCTCTAGTCCGAAACGTTACTGTCCAAAACATAATGAG
CTGTTGAAATATTTTTGCCAGCAATGCAAGGTGGTTGTTTGTACTGATTG
TATGGTCAGTGTAGAGCACAAACAACATAACATCTCCTTGGTGTCAGAAA
CTACTGCCAAAGCTAAAGAGGAATTGAAGCAAAAACTTGAAAAGATGAAA
GACAAGAAGCAAACAATGGGTAATTGTCTCCAACAAGCAAAGTCTTTTTA
TAAAGATGTTATAGATGAAGATATAGCGAGCGTTGAATTAATCAAGAAAA
CTTTCAACGAAGCGCGAAGTATTCTCGCTGAAAAGGAAGAGCAGCTCATT
GCTCAAGTTCAAGCCCAAAGCATGTCAAAAGGTGAAAATAAGCTTAATCT
TGATAAATTCTCAAAGGCTGTTCATGCAGTCACTCAGACAGCAAATTATG
TGGAATCTGTCGTAAAGGAAAATTGTGATGATCTGGAGATGATTAGTGAA
ATGTCCAAATAGATGGATAAAGTCTTCCAAGAATATTATCTTGATGAACC
CATTACACTCATTTTCCAGTGGGCCTTCACTATTCTTCAGAAAATTCTTT
TTTCTGCAGAGCTCCCAATGTAATCAGATTTTCTGTGAATCATCGAATAC
CATGAATGTTACGCAAACAATATATGAAAAGTTCTAGGCAAAAGCCCACT

Coding sequence (CDS) from alignment at sc0000216:80218..90267-

>TCONS_00015762 ID=TCONS_00015762|Name=TCONS_00015762|organism=Clytia hemisphaerica|type=CDS|length=2313bp|location=Sequence derived from alignment at sc0000216:80218..90267- (Clytia hemisphaerica)
ATTGCACAAAATATTATCGAAAAAGTGAAAAATGCTGCAAAGAAAGGCCC
ATTTTGTCAAGATTGTGTCGCCGAGTCTCCAGCTTCAAACCATTGCGAAA
CTTGTGTTTTAAATTTGTGTATAAAATGCACTGAATATCATCAGAGTTGT
GTGAGGTTTGTAAATCATAAAATTATTGACATACAAAATGTCACAAAGAA
AATCTCTAGTCCGAAACGTTACTGTCCAAAACATAATGAGCTGTTGAAAT
ATTTTTGCCAGCAATGCAAGGTGGTTGTTTGTACTGATTGTATGGTCAGT
GTAGAGCACAAACAACATAACATCTCCTTGGTGTCAGAAACTACTGCCAA
AGCTAAAGAGGAATTGAAGCAAAAACTTGAAAAGATGAAAGACAAGAAGC
AAACAATGGGTAATTGTCTCCAACAAGCAAAGTCTTTTTATAAAGATGTT
ATAGATGAAGATATAGCGAGCGTTGAATTAATCAAGAAAACTTTCAACGA
AGCGCGAAGTATTCTCGCTGAAAAGGAAGAGCAGCTCATTGCTCAAGTTC
AAGCCCAAAGCATGTCAAAAGGTGAAAATAAGCTTAATCTTGATAAATTC
TCAAAGGCTGTTCATGCAGTCACTCAGACAGCAAATTATGTGGAATCTGT
CGTAAAGGAAAATTGTGATGATCTGGAGATGATTAGTGAAATGTCCAAAT
AGGTCCCAAATGGTGCATCTGAGCTATCTACCAATTATATTAAATGCCCT
GAATGTCGAGAAGAAACCAAGATTGCACAAAATATTATCGAAAAAGTGAA
AAATGCTGCAAAGAAAGGCCCATTTTGTCAAGATTGTGTCGCCGAGTCTC
CAGCTTCAAACCATTGCGAAACTTGTGTTTTAAATTTGTGTATAAAATGC
ACTGAATATCATCAGAGTTGTGTGAGGTTTGTAAATCATAAAATTATTGA
CATACAAAATGTCACAAAGAAAATCTCTAGTCCGAAACGTTACTGTCCAA
AACATAATGAGCTGTTGAAATATTTTTGCCAGCAATGCAAGGTGGTTGTT
TGTACTGATTGTATGGTCAGTGTAGAGCACAAACAACATAACATCTCCTT
GGTGTCAGAAACTACTGCCAAAGCTAAAGAGGAATTGAAGCAAAAACTTG
AAAAGATGAAAGACAAGAAGCAAACAATGGGTAATTGTCTCCAACAAGCA
AAGTCTTTTTATAAAGATGTTATAGATGAAGATATAGCGAGCGTTGAATT
AATCAAGAAAACTTTCAACGAAGCGCGAAGTATTCTCGCTGAAAAGGAAG
AGCAGCTCATTGCTCAAGTTCAAGCCCAAAGCATGTCAAAAGGTGAAAAT
AAGCTTAATCTTGATAAATTCTCAAAGGCTGTTCATGCAGTCACTCAGAC
AGCAAATTATGTGGAATCTGTCGTAAAGGAAAATTGTGATGATCTGGAGA
TGATTAGTGAAATGTCCAAATAGGTCCCAAATGGTGCATCTGAGCTATCT
ACCAATTATATTAAATGCCCTGAATGTCGAGAAGAAACCAAGATTGCACA
AAATATTATCGAAAAAGTGAAAAATGCTGCAAAGAAAGGCCCATTTTGTC
AAGATTGTGTCGCCGAGTCTCCAGCTTCAAACCATTGCGAAACTTGTGTT
TTAAATTTGTGTATAAAATGCACTGAATATCATCAGAGTTGTGTGAGGTT
TGTAAATCATAAAATTATTGACATACAAAATGTCACAAAGAAAATCTCTA
GTCCGAAACGTTACTGTCCAAAACATAATGAGCTGTTGAAATATTTTTGC
CAGCAATGCAAGGTGGTTGTTTGTACTGATTGTATGGTCAGTGTAGAGCA
CAAACAACATAACATCTCCTTGGTGTCAGAAACTACTGCCAAAGCTAAAG
AGGAATTGAAGCAAAAACTTGAAAAGATGAAAGACAAGAAGCAAACAATG
GGTAATTGTCTCCAACAAGCAAAGTCTTTTTATAAAGATGTTATAGATGA
AGATATAGCGAGCGTTGAATTAATCAAGAAAACTTTCAACGAAGCGCGAA
GTATTCTCGCTGAAAAGGAAGAGCAGCTCATTGCTCAAGTTCAAGCCCAA
AGCATGTCAAAAGGTGAAAATAAGCTTAATCTTGATAAATTCTCAAAGGC
TGTTCATGCAGTCACTCAGACAGCAAATTATGTGGAATCTGTCGTAAAGG
AAAATTGTGATGATCTGGAGATGATTAGTGAAATGTCCAAATAGGTCCCA
AATGGTGCATCTGAGCTATCTACCAATTATATTAAATGCCCTGAATGTCG
AGAAGAAACCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008804XLOC_008804Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015762-proteinTCONS_00015762-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015762-exon-sc0000216-1575043694:90235..90267TCONS_00015762-exon-sc0000216-1575043694:90235..90267Clytia hemisphaericaexon
TCONS_00015762-exon-sc0000216-1575043694:86129..86164TCONS_00015762-exon-sc0000216-1575043694:86129..86164Clytia hemisphaericaexon
TCONS_00015762-exon-sc0000216-1575043694:80218..81107TCONS_00015762-exon-sc0000216-1575043694:80218..81107Clytia hemisphaericaexon
TCONS_00015762-exon-sc0000216-1510915933:90235..90267TCONS_00015762-exon-sc0000216-1510915933:90235..90267Clytia hemisphaericaexon
TCONS_00015762-exon-sc0000216-1510915933:86129..86164TCONS_00015762-exon-sc0000216-1510915933:86129..86164Clytia hemisphaericaexon
TCONS_00015762-exon-sc0000216-1510915933:80218..81107TCONS_00015762-exon-sc0000216-1510915933:80218..81107Clytia hemisphaericaexon
TCONS_00015762-exon-sc0000216-1491911889:90235..90267TCONS_00015762-exon-sc0000216-1491911889:90235..90267Clytia hemisphaericaexon
TCONS_00015762-exon-sc0000216-1491911889:86129..86164TCONS_00015762-exon-sc0000216-1491911889:86129..86164Clytia hemisphaericaexon
TCONS_00015762-exon-sc0000216-1491911889:80218..81107TCONS_00015762-exon-sc0000216-1491911889:80218..81107Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000216supercontigsc0000216:80218..90267 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.466317	0.231967	0.143635	0	1.10324	0	0	0	0.671206	0.832626	0	0.577187	0.538468	0.655116	3.07023	2.22428	1.32375	1.52776	3.86437	3.67776	1.714	0.544572	0.507339	1.47936	0	0	0	1.42098	0.269626	0.293797
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005622 intracellular
molecular_function GO:0008270 zinc ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015762 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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