XLOC_014184 (gene) - C. hemisphaerica

Overview
NameXLOC_014184
Unique NameXLOC_014184
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000529:105935..116159+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014184 ID=XLOC_014184|Name=XLOC_014184|organism=Clytia hemisphaerica|type=gene|length=10225bp|location=Sequence derived from alignment at sc0000529:105935..116159+ (Clytia hemisphaerica)
GCTGCCCAAAGACACCATTAAATTATCAGCTACAGAGGTAAGTTTgcaga
agcagccggcgaaggaattttttagaaatatgtgttcttatcttctagga
gatcaaatgttatgacctttcagcaatttttcatacaaatgatgtgttct
tatttctaggaaacctttatccgcactatttgtctccctaaacttattac
ttctttatggtttgatgtgttctaaaatctaggaaaaacagtttgccaag
acaaacttgtaagatatttgtttttctctacgaaagatgtgttctaaaaa
tttccagggttactaggcaacaagattacatcaatttttgcTTTATTATA
CCCgtctccttaaaagatgtgttctgaagctttctagggttacctagccA
ACAAGAACCCGtagatgaccttgattataccccNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNat
gctagaattttgaccattttttgcacgaaagggatcgaaaatttggggga
aaatgcactctaagggtatgattttcactgatttttgctgcactgtaatt
GCTGCACTGtagtgcaattttaaaagccaatttttggcccgcacataccg
tcagtccgcaaacccagtgccccccccgggattaTACCCCTGTttcgtca
gaacacatcatcatttctagacatttctagctgattaattttcgaagatt
tgatcagaacagatcaaaatttctagctgaaatatgctcttagaacacat
cggaaaaaaaggtcgcctcgccggctgctttcgagTTTGTATTAAAATCG
AGATTGTAACATGGCATGGTTCGACCCTGCACTTTCGCTTATAATTTCTA
AGAGAGGACACAAGTCCCATCCTGTTGTAATAATAATTAGTGCACCGCTA
AATCAGGGAAATGGTAAATATAGGTTATTTAGAGAGTTGGGGATTTTTAA
ATTGTAATGTTTAGGGCCCAAAACATTTTCCAGTGGATAAAAGGTGCCAC
CAGGTCACACGGTATATTTATTGAGAAATTACTACAAAATGCTGGTAAAG
AACGTTCAACCAGAGTGAGAATAAGAGAGTACAGTGTGCAACATGGATTT
TCCAACATTTGTCGAAGAGGACGTAGAAAACATAAAGTTACTCAAAATTT
AAGAGGGCGTTCAGGTTTGATGGTGTGATAGTATTagcccttttttctgt
cggtgcTTCGGTGTTGGCTAGGGTATATCTTGCTTAATTGAGTCTACAGT
AATCTAAATTTCAAACGAGAATCTTACAATATCGATTTCAAAGTGTCGAC
ATTCGACAGTTTCTAGTTACTAAAGTGTGGCACCTCGATACAGGAGAGGG
GAGGAGCTAAAATACAAACTCGACACCGTTCTGGAAATGTGAGGAAGGAA
TCGGGAAACCTTATTTTCTGCCTCACATTGATGGCCCATCCATGACACGT
TTGGTTAAACAACAAGATAATCCGCAATGTAAACAAATCTTTATTCCGTA
AGAAAATAAGGATGTAATTACATGATAAACCTTTCCTTCGCTAGGGCATG
TTTCCAACGAACTATTATACATACATAGGACTAgattgtgcaaagtttca
gaTCAGCGAAAACAAAATAAACTTTTCGTCCATCCGTTTTTAGGAACTCA
AAGCTCACTATACAGAACGCAGTCTGGTCAATGTTGTAGCACATTACTCT
ATAAGTGAAGCTAGAAAACACCCCTGTATTTTGCCTGTATCAAAGCTAAC
CAATGTTAGTTCACAAATACCCCTGTCTTAAATAGAATAGGTACGCTAAG
ATTTCGAGTTATGAACAGGCGAGGAGGGACAAAGAGAGATGAACTCAACA
TGGATAGGGaaatcaatttgaaaacttATTAAACTCCGTAAACAGAGGCC
TCTGNGATaggaaaatcaatttgaaaacttATTAAACTCCGTAAACAGAG
GCCTCTGTCAGAAAATCTAACCCGTTCTTAATACTTGGATTAAGGGGTAA
GCTGCGGTCTTCTTTTGATTAAGGCTTGATTCATAAACAACCCTTATGTG
GCCTACGgtttaaaaacaataacaaaaagcTATCAATTATCCACTTTTTG
AGTCGCCTTCACCTTCAGAAAGTTGTAGTAAGTACACAGGATTAATGATT
GAGACGTCACCTTTCAACAGATTGTTTTTCATCAATGGCCTTTTACTATG
AAAGGTATATCCCGCGGTGTCCGTGGATAATGATGACTCCATGAAGAGGC
CACGTGGACGCAATGTACTCGAGAATTTTTTACAGAGCTACAGACTCAAT
ACAGGTCGAGATCCTTAATGAATAGTAGTGCTTATGAAATCATTAGGTTG
GTTGCGCAAGTCTACTCCCTTCGATTTGACCACAAGACTGATTACTATCT
CTGATTAGTTGTCTATGTACATTATGTATGACAAACttatgtaatttatg
caatttCTTGTATGAACAGGCAGATAGTAAATAACATCCCTTTAtgataa
aaagatgaaaaattccattttgtttattttggtaaGGAAAATAGAATTTG
AAAGAATGCTTGTTGTTGACGTCCAGACGTTTGTCACGTACAGCGAGTAA
AGAATTCAAACATCCAGCTCAAGTTTCATGTCAACTGTTGACTTATCTCT
ATACAAAGAcactgattggttgaaagtaacgtCATTGTTTCAAGCAACCA
ATCAGGGAGAGTTTTGTAAATAATGTTTAAGCGGTTGAGAGCATTTTTGG
AGAATGAGGCCATGAGGATGAGCCATCAAATTGGAAAGAGGCTCAgtaaa
aatttcatgtttcggctttttgttgtttcttatgAAAATAGAATCGGATC
AAAATCAACTGAGTTGAGGgttgttttatcaaaatgtttCGATTCATTAA
TCCTCTCCCTCTCTCTCACCTATACATCACAACCtcacaaaattcgcgaa
aaacGTTGGGGACTTATGTGAATGAGAGACTTTCTATTAAGCTGACTGAT
GACGAGACTTCTTGAAGACCAGTTTGAGTTAAAACATGTTTCATTGACGA
TAATTTTTTACAACTTGTTATCTATGAGGGTAGAGACAAAGTCAAAGTTT
TGGACGATTAACCATTTTGCTAATTAGTGAAAGAAACCCTAAATTGGGGT
AAAAAGAACTCGAGTGACAATACACGAAATTTTGTACTGAAGaataaggc
ttgaaaaattttACAGGAGAAACTTCTTTTGATTTGCTTGCATAACTGAT
GCGGAACAATGGAATGGATAAAATAACTTCACCGGATATCCGATCACTTG
GTGGAAACCAGGTAATAGTTGGGTTCATTTCaactgaccaatcagaagct
gaGAACACTCTGATAGTTCTATGATGGGGATGAAtgctttttcattaaaa
ataagttaattCTTGGGTTAGTCCTGGCTGTTCTTGTTTTTCGGTGATTT
TCAGGGTACTTATTGTCCTCACATGCATTCACATTTAAGGCGTTTGGCAG
CTATTTATGAAATCTGCACGACTTGGATTTTTCTTAACAGTTTTGGGCAG
AGTCTTTTTTCTAATACAAATGGGTGCACGGAAATAGACCGGTCTGATAA
TACAATGTCATTAAAATTAAGTATCCTTTCAATCTGCATAAAACATTATT
TTAGCAAATAACCGAAAACTTAAATTCATATTATTCTCTTAAGTGCCAGA
TCGAATTTTAGTATGACTGTGAATCAATTTCCAAATCTAACGAGCGATCA
CGAAGCACTTGTTCCCATTATCTTATCATCAGTTGTCGAAAACTTTCGTC
CGAGAACTATGACTGTGCATGACACAAGTGAAACAAAACGTGGGAAAATA
TAATCATGTATGTCTGTTTCTGTCTGTAAACATCTCGCTCAGAAAAAGTT
GTTCAGCAAGTAGATCATCTGTTGTTCGCGTTCATATGAGAGAGGTAGTC
CTTCCGATGAATGGAACAAGCCCTGTCTAGGACAGCATCCCCTGTATTGC
GATAGGGAAACCACTGCGCTTACCTGACCCTGCAAATACGTACATACGAC
ACAGAGCTGCTGGCGCATACCAACTATACCCGAACGACTCGTGAGGACAG
TGGTCGAACCTAACAAGTATTAACAACCACGCCAGAGTCAGACATATCTC
CCCACACGTTTGTATTAGAATATTTTACTGATTAATGTACACAACACTGA
GCAGGAGCAAAACCCGAACTCCTATACGAAATTCAAGACTGTATCCATTA
CACAACTGCGCCATCGGGTTAGTTTACGCTTTACGAAAAAACTTGACAAA
GTATTCAATCTTCAGAATACAAGGATATATtcatcaaaatatataaacaa
aacttttagCTCACTTTAAGTCCATTGTGCTTTTCTGGTAGAATAGGGGG
CAATAAAAAACTCAAGCACAAACGTGAACATAGCAATTGGGGCCCAGGGT
CCATTCTGTAGTTACGCAATCTCAATGAATGAATGGAAATGTTTTGAGAC
TTAAAACAAGAGAGTTAATGGGCTNTTCTGTAGTTACGCAATCTCAATGA
ATGAATGGAAATGTTTTGAGACTTAAAAAGAGAGAGTTAATGGGCTGGCG
GTCTTCTTTATGACATCAGCAAGACTAAGTTCTAACGTGTAGGTGATCGA
TTAAAATTAAGATTTCAAAGATATTTAGATGGAAGGTTTTAATGAAATCA
TCCTACATGATCTAACATGATTCGATAAGTGTTCAGACACCAACCAATTA
ATTAGAGCGATATCTTTTACTTTCCTTCTTCACGAAATATCggagttttt
aaaaaattgcctGAAATCACATGATTTTACAGGACAGTCAATACATAAGC
TCGCCAGTAACTTCGGCGTGGAAGAGAGGTGACCATAACAAGTTAAAAAG
GGTCCTTCCTTAAATAATAAATGTGGATGAATTGTTTGCCATTCTGATGA
ACCTTCAATCTCTCTTTGATCGACTTCTTGAAATTTGGTGATTTGAGGAC
CCTATTAGATTGTCAAaggttgaaaaaagattttatacCCATCCCTCTGC
GCCTTATTCGAGTATCTTATTCAAACCGTCGATCATCgaatttctttatt
cattagGCCGTGAAACGTCACGCAAACCAAAAGATAATTAACAAAGAGTA
GCAAACCATggacaaaaaaactttattacCAGTTTTTGCCATTCTTCTAA
AAAGTTTGTTGTTTCGCATTGAGGCGAAAACAAGAAAAAGGGGACAGTTT
TTTCGACGCAATAATGCGAAAACTAATATTAACATACGAATGTTGATTAA
TTTccatacaaaaaaaacaatttcttgaaatgttttttgttgtatttgtt
tgcGACGGTTGAGAAAGGCTGTCTACTCTACTATGaataaaattacttta
aaaatacaaaaaatgaagCTTTAAGAAATTAGCATTGCGTCTCGCTCGCT
TGCTTGTGTAGAGTGAAATGATGAAAACTTGAGAGGGAAGTTGTGTTTTG
TGAGAGAAAGGAATGCTGCGCCAGAAACGAAAGAAAAGATGTACTTTCAA
AGATGAGACGGTACTTTGAACTCATACTTGAatgagtttttttgtttgtt
acaTAAAATAATGTTGGTAAAATCCCCTTGTAACAAAACTGCCCTGAAAA
TAACcttattttagaattttgacTGCTTCTTTTGTAATGTAATTTTCGAC
CCTGATTGTGACCCAGTCTCTCTTATACTTTCAGTTCGTTCAAATTTCGG
TACGCAATGCAAGAACACATTTGAATGATGGAAAGGCACAATTTACTGAT
TTCGAAATCGAATTAAAGGTATTTATAATAACATCTTCTGATTGGCTTGA
taaaatggttttaattacCCTTGACTATTCATTTAATCCAAAATACCAGA
TATCATTTAAAAGTCTATTCAACTTTTAGGATTCTTAAGTCGAATACGAT
ACGTCTCAAGATTGACGTCATTTACTGATACTAGGCAACATTAATAACAA
ACCAGACCTTCTTCGTCAGAAGCTGACATACAGTGAATGCGTTAAATGGT
GCCTTTTACTTCATTCACCTCAATTACCTTATTTTAGACCAATCCCCTTT
ATTCACCCCAATCAACTCTTTTTTAGACCAATCACATCGCATTCACATTG
AAGAGCTCGAAAGTTCGAAGAAGATATTCAGACTTTGTATGGCTGAGGAA
CAGGCTGTCAAAGGATACAATCGACTCGTAAGTCATCTATTGTCAAACTC
ACCCATCCCTCTGTTTCTCAGAGAGTCAACTATGTACATTTCGTTGATAT
TCTCCCGAAAAGCATTGGGAATAAGAGGAGTGAAGAAGTGATGAGCATCT
GAAGTGATAATTTTAAAGGGAGACATACCTGTCAAACGATCCCTATTTTG
TTTCTGTTCATATAATGCGGCTTTGCCATTCATGTCTAGTGTACTTCGGA
CCATCTCCAATCAgctctgtaaaaataaaaggaagaagtTGCAATGTCAA
GGAGAACAACTACCTTCTTTGCTTGATAGTTCTTATGTCGTTTGGATCAA
TAAATTGTAACGGGGCTAAATACTTAGTGTAATATTTTACGTTTTTGGTA
AAAGCCACAATATCAAGAGTTGCATTTTTTAATCCATTTTAATTGTCTCG
TTAACATAATTAGAATTCTTTGTTTAGAAATTCATTACCGTCACTACCAG
GAAGAAGGTTGTTTGGTCGTTTCAACAAAGATTTCATCAAACAAAGACAG
AAGAAATTACAAGAATTCCTGTTcgggtaatttttcttctttttcatatt
tataCGTTTAGAAGATCGCCTTGTCTTGTTTCGAAGTGCTTTTCTTTACA
gaacttccttttataaaaattggacCTCATGTCAAATCTGCTCTaatagt
tccatttatactgagacaGAAAAATCGTCTAAgacgagtagtttgtaaaa
tgtgatctgtggaggagttcctatttattgaaacatgaatggaaagtaca
ctcctccataatgttttctaaattgctcgtctcagacaaattaatcgtct
cagCATAGTGTGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggggcccccccccccccccc
gggggggatGGTGagagttaatttctttaggtgggactttgggtgttttg
gaaaaagttaaagtaaaatttcttattttcagattttattatatattttt
tctatatatttcataaataatTGTTTACCATGgtaaacttttctttttat
tattacaGGTCATTTGATGTttgaataaatatctttaagaatgatttttt
ttacttttgcttaccttattacacttatataactaGTCAAGTAAAAGTAA
GCGGGTAAAATGAGTGCGAGAATTTATTAACGCGAAAGGCacggttttaa
tttttttttgtttttagctgggatctgggattctgggctgaaggtgggaa
ttttaggattatgtgggacctgaattttcaggtgggacctggaactccct
tgcacactatgctcagtataaatagaactaatctaaattttggtaataaa
agaatTAGTGCAATTATAAATTCTAATAATTTTAAGCAAATTCGAGAAAT
CTAATTAATCCTCGGGCGGTTtctgttcttacgatgttcttattttccct
aaATTCCAGCCTAAACGTTCTTACAAACTGGGTTCTAAAAAAGTGTGTAC
TAAGTTACAATATTTCCGATTATAAAGAAAAGTAATGTACACTATGCGTC
TTATTTGAAGAATCTTCCACCATTTTTCAGGTTGGCACAGAACAATGTTT
ATCTATCACACGCAGCCATCCACTTGTTTCTACAAAGCAAACTTTCCGTT
GAAGAAATCGATTCTTACTTGGACAACAACCAAGAAGAAGATGCTTCTGA
AACTATCCTCGCCGAATCTGAAGGAAAAGCTCGTTTGAATGGATACGAGG
CTAGAGATTTAACGACCGATGGATTGAGCGACCCTGGTGATTTAGAGGAT
GCCATTGATAATAATAACAGTTACACGGAAAGTTTGGGTTCGATTCCTGT
AGCGGATAAAGAGGTTTTGAGCGATACGAATGACGGAAATAACGCAGATG
ACGAGCTAGATGATGCAGCGCCGCAGGATGATGCTGAAAGTGAGAACAAT
GAAGGGAATGTGTCGGATGATGAAGAGACGTTAGTCGAGGAGTTGAACAA
GTTGAGAATGTCATTACCAGCTCCTTTAATCGCCACATCCTCAGACACCG
ATCGTTTTGGAAGTTCTTTCGAATATTCAGACGACGACCAATCGCCTTTA
GAATCTTCCGGTGAATCCGAAGGTGATTCTTCCTCCATAGACCGCAGGAG
CCTCCGTAGCAATCCTCCACTTGCAAGAAACAGTCAAACACCTTCACGAG
TCAATTCTCATGATAACATACGAAGTCCATCGAGGAAATCAAAAAAACGG
TATTCGTCGAGGACAAGCAGTTTTAGAAAACTTTACAATTCAAATGCTTC
ATTGCCGGAATTTTACAATCCGTCATATGGAGACGGAGTAGCAGCCGATG
AACGAGAGCGATCATTACGAAGAAGTAAGTCAGTTTACGAGACGAGGACA
AAACGGCGGAACCGATACAAGTCAGAGATTCTTTACACAGACGTTTCCAC
GAGCGATACAAGCAAATGGAAAACACACCAAAGACACCACAGTTTGAATC
GAACTCCTTCTTCAAGGAAAGTTCGTCGATCAACTTCCTTCGCATCTTCA
ATCGATAGGACTCCTGTGCGAAGGAAGATCAGCTTGAATGAATATATTAT
TGTAGGGCGTGAATCATTGGTTGACCTGAGGACCAATGAAACGTCTCGTG
GAGGTGACGAAGACTTCAATAAAAGCTCAttgtaaaaacaaaattttcca
tATCCTCTTTATATATACTACCGTGAGAATCACAATGAATGAATATTACA
CTGAAGGCTGTGAATATATTGTAAATATTAGGATTCTATTCGACGCACAT
TCAGTCCTTCGCCACAGGTTGaacttcagagaaagctaagCTGTGGTATA
CCAGATAAGCAAAATAATTACACTGTGAAGGCAGTATTCATCGTGAATTC
CGCGAaggttcatatttcaaaaaagattttaaaagtgcTTCTCTTTTTCT
CCATACACAATTTAtttatgtatctacatatcctcAAAGTCCTTTCAACC
GAAGAAAAAGTCAATAAATAtcaaacatgaaaaataaatcTGACTCGTTT
ACCTTTGTCGCAGGCTGGATTCTGTGACGGGAGGCTGGGAAGACGAGTCA
GAGATACAAAGTAGTTTTGTTTTCTGAAGTAGATTAATACGAAACGATTT
CTTCGGTAAAAATGTTAACCGTTATCTTCCCTTTTGAAACAAATACAATC
ATTAAACTTTAATATTATTTCNACGTCTCGTGGAGGTGACGAAGACTTCA
ATAAAAGCTCATTGTAAAACCAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025247TCONS_00025247Clytia hemisphaericatranscript
TCONS_00025248TCONS_00025248Clytia hemisphaericatranscript
TCONS_00025249TCONS_00025249Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00025249-proteinTCONS_00025249-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000529supercontigsc0000529:105935..116159 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08	0.07	0.15	0.17	0.03	0	0.79	1	1.15	3.06	1.84	0.96	20.84	19.75	1.17	0.48	0.26	0.47	19.57	21.72	0.31	0.33	0.06	0.14	0.23	0.51	0	0.12	0.68	0.32