TCONS_00025249-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00025249-protein
Unique NameTCONS_00025249-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length478

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00025249-protein ID=TCONS_00025249-protein|Name=TCONS_00025249-protein|organism=Clytia hemisphaerica|type=polypeptide|length=478bp
MLRQKRKKRCTFKDETFVQISVRNARTHLNDGKAQFTDFEIELKTNHIAF
TLKSSKVRRRYSDFVWLRNRLSKDTIDSNSLPSLPGRRLFGRFNKDFIKQ
RQKKLQEFLFGLAQNNVYLSHAAIHLFLQSKLSVEEIDSYLDNNQEEDAS
ETILAESEGKARLNGYEARDLTTDGLSDPGDLEDAIDNNNSYTESLGSIP
VADKEVLSDTNDGNNADDELDDAAPQDDAESENNEGNVSDDEETLVEELN
KLRMSLPAPLIATSSDTDRFGSSFEYSDDDQSPLESSGESEGDSSSIDRR
SLRSNPPLARNSQTPSRVNSHDNIRSPSRKSKKRYSSRTSSFRKLYNSNA
SLPEFYNPSYGDGVAADERERSLRRSKSVYETRTKRRNRYKSEILYTDVS
TSDTSKWKTHQRHHSLNRTPSSRKVRRSTSFASSIDRTPVRRKISLNEYI
IVGRESLVDLRTNETSRGGDEDFNKSSL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014184XLOC_014184Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00025249TCONS_00025249Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0035091 phosphatidylinositol binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainSMARTSM00312PX_2coord: 15..131
e-value: 1.1E-16
score: 71.5
IPR001683Phox homologous domainPFAMPF00787PXcoord: 17..130
e-value: 1.0E-21
score: 76.9
IPR001683Phox homologous domainGENE3D3.30.1520.10coord: 10..144
e-value: 3.3E-24
score: 84.6
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 17..134
score: 15.331
IPR001683Phox homologous domainSUPERFAMILY64268PX domaincoord: 14..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 401..434
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..341

Blast
[Close]
BLAST of TCONS_00025249-protein vs. Swiss-Prot (Human)
Match: SNX11 (Sorting nexin-11 OS=Homo sapiens GN=SNX11 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.174e-24
Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = 0 
Query:   13 KDETFVQISVRNARTHLNDGKAQFTDFEIELKTNHIAFTLKSSKVRRRYSDFVWLRNRLSKDTIDSNSLPSLPGRRLFGRFNKDFIKQRQKKLQEFLFGLAQNNVYLSHAAIHLFLQSKLSVEEIDSYLDNNQEEDASETIL 154
            + E  + + V++ R         + D++I L TN  AFT K+S VRRRY +FVWLR +L ++      +P LPG+  F   + +FI++R++ LQ FL  + Q+ V LS + +HLFLQS+LSV EI++ +        S+ IL
Sbjct:   12 EQEEVITVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNA-GLVPVPELPGKSTFFGTSDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQLSVPEIEACVQGRSTMTVSDAIL 152
The following BLAST results are available for this feature:
BLAST of TCONS_00025249-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNX118.174e-2438.03Sorting nexin-11 OS=Homo sapiens GN=SNX11 PE=1 SV=... [more]
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