XLOC_011334 (gene) - C. hemisphaerica

Overview
NameXLOC_011334
Unique NameXLOC_011334
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000350:367030..377524+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011334 ID=XLOC_011334|Name=XLOC_011334|organism=Clytia hemisphaerica|type=gene|length=10495bp|location=Sequence derived from alignment at sc0000350:367030..377524+ (Clytia hemisphaerica)
ATAAAAATGATATACAATATTTCACCTTATTTCATAAGCACTGCAATAAA
GCATCTTTCAGTATCTTATAGTAAGCACAGTAAAGACCACCTCATCCATG
CTTATGAATTATAAAAATCTAAACTTTTATCTATTTCTTATGTTAAAAGT
AGTAGTaatcttgaaaatatgtaaaCTGGCATGAAGCAGAAATATGTCTC
AGACTACATCTTCTAATATTGTCGCAGGTAAgcaatatcaatatttttaa
agtAATTAATCCTGCCCTcttcattcaaatttttttaaagaataaaaatg
aaacacttgagattttataaaaaagatttgtattcttttaattttcttta
tatgCTTTGAAGTAACTTCCTTTGTATCAAAATTAGCATATAAAGTATAT
TGTATTGCTTTTTATTTCAAGGACATTTAATTCTTCTTTAACTTTATTTC
AGGTTCAAACGTTCTGTCAGAAGATCAACAAAATGTTGTTGAtgatattc
taataaaaaaatggtaaattttgcATCTCTTCAGATCTCTTTATTAATTA
TTTCAAAACTAATATTATCACTATAAGGTTTTAAAGCCTTAAACTTGCTC
AATCTGAAAGATCTTGTTAATCAATTTTGAAAAGCCTTATTTATGTTTAA
TAACCTTAAGTAAGTATCAGATCACAGTCTTTTAAAACAATCAAGTAAAG
TTTAtgtcattttatttttacatttacAGTAGTGTATTCATTACTGGTTC
TGCTGGTGTTGGAAAAtcgtttttgttaaaaaagatcATTGATAGTCTTC
CGAAAAAGAAAGTTTATGTCACTGCAAGCACAGGTGTTGCTGCATGTAAT
ATTGGAGGTTCTACATTGCACAGGTTATTGATACTTTAACTAGACCCAAA
TAATAAAggaatttgaccaatttgtACACCAGCtaatataaatttaaaaa
tcctTTGATTTACTCTAATTCTAAATGTTTTAATTAGCTTCACCTAAAAT
TGGAAAATCAGAAATCAATGACaatgattttattaaaatttaaaaaatca
ataaaagacCATTTTCAACGTTTGTGTTTTCAGTTTTGCTGGTATTGGGC
TTGGTGATAAACCAGCTAAAGAATATGGTGATCAAATTTTGTATAAAAGA
TACAAAGGGGAAGTCAAGGATAGATGGGAACGTTGCCAGTAAGTTTCGTT
GAAAATTGCACCAGAGATAGCACAAGTATTAgggtcattttttaaaaatt
aaagttgGAAGGAAGATTTCAATTTAATGTCAGGGTAATAGTTATTAAGA
TCATTTTTACCTCATTCTGGTGTAtgataatttattgaaaatattcaatg
aaaaaagTCTTGAGTGAGATTTTTATTAGTAAACTGACTATCTTTAATGA
AGGAATCAAACCATTTATGATGCTCTGATTTTTTAGGGTGCTGATTATTG
ACGAGATTTCTATGATCGATGGTttcttgtttgaaaaaattgaagaagtt
gCTCGTATCGTTCGACAGAATTATGCACCCTTTGGTGGAATTCAACTTGT
TTTGTGTGGGTAAGTTAAGTTATATATTATAATCTCTTAGAAGAAAAAAG
CTCTCAGTCCAATGACTTCTANGTAAGTTAAGTTATATATTATAATCTCT
TAGAAGAAAAAAGCTCTCAGTCCAATTACTTCTACCAGAAAACCTTGATT
TTAGCGCTCGTACAATTTCTTCTAAGTTTTACTGTAACTGTTTCTAAGTA
CAGACTAACTTAAGTTAGTCTGTACTTAGAAACAGTTACAGTAAAACTTA
GTAGTACTAGTAGGTCATTCTGTATCATCATTGACAAGAATTTCTGGATC
TGAAAGCAATGTAATAGAGGATGAGATGAGTCATCTCCGTTGTTCTTCAA
gcactttttaataaattttattaCTTGGATTTGGCTTTTATTTCTTAGTA
TTAGGTAGGCCGAAAATAATCCACCTTAGTATTGTTGTCATAGCAAGGAA
TTGTAACCATCAGATTAGTATCATCATTTCACTAGCACTGCCTCATTCAG
AAACTTTTTGTCTTCATCTTTCAGAGACTTTCTGCAGTTGCCTCCAGTAA
AATGTGACCGCTTTGCATTCGAAACTGATGCTTGGAAGAATTGTATCCAT
AAAACTGTCGTTCTGGACAAAGTGTTCCGTCAAAAAGAGCTGGGATTTGT
GTCCTTGCTAAATCGGTTACGAGTTGGCTCTTACACGAAACTAGACATTG
AAGTTCTACAGAAATGCAATAAAACGCTTTTCCCGAATGATGGAATCAAG
CCAACGTGTTTGTTCCCTTTGAGATCGACTTGTGATCGTGTCAATCAAAC
TGAGGTGATTACATTTAAGATTGTAGTAGTAGTGTGGCTGTTCTGTATCA
TAATGATcttcagtggagacaaaaaggctatgatagaatttgaataacAT
AACGGTTTCATACTTGTTAAAAAGATGTTGAATTATTGAATTTTATCaca
gagaaaaaaatcaaaaaattttggaaaattactatgtaaaatgaagaaaa
agaaatcgtGAAGAAATTTTCTATAATAATAGGAAAATTCTGCatgtaat
tgtttttttcttcctcattttaattttttttgagaatcttttctatttta
taGTATGGAAATCTTTTCAACAAGTACAAAACCACAATTTCATTCAAACT
CTATCAAATGTCCagcctttttttatttctgcTGCAGATTACCTTGAGAC
AGAAAGATCATTATTTGGAGCACCAGTAAAATTTATTGAAAGGCCCTTTT
AACTTCTAAATTTAGGTTGACTTGTTGGAATAAGGCCATAATCTTGACCa
tcatatttaaaatttttgaatgggTATACCTTTTCAAAAAGGGAGAATCG
TGGAGAGTCGCTTATTGTCCAATATTAAGCAGGATGTACCGATTTTTCCT
GATGATTATAAGGATTAATATTCCAGACCTGCACATTATTTTAATATAGC
CATTTCAAAAGATCCCTTCAACAAAGTGCTAATGCTCCTTTCCAAAAAAT
TAactcatagtgtgcagaggggtccagcccccagcatttttcaggggggc
TAAGGAAAATAACCCCgggctaaattctagaaacatcttcacaaagcaaa
atatcaaagaaattttgcatgcaaatttccaaaaaaaaacattttcaaga
gggataaaaccttcccacacagcatagatttttaacatgatttaaaatat
cttcaacctatcagctctgccccagttctattacacaacactagccccca
gtattttttgaaaaatacagccccAATCAAGCAACAATGGTTTACACCCC
TTAAGTTCAgggggggtgcattctatgtTAACACTACTATCTTTCTATCA
TCTTCttgacttttgtttattttttagttaAACAAACTCCCAGGAATAAC
TCAAACATTTGATGCGTAAGaataaaatttgatttcttttctttttcttg
gacCTTAAATATATCAAACGAATAGCGCTCTACATCgaatacgtcataat
tattttaGCTAAACATTTTACGAGATTCAATCCCACAGTTGATTCGAAAT
GATTATAAAATCTTGAAAGTTATTactgtatttttcttttgacattGTAA
GTTATTAACTTGCACGAGTAATAAACGCAAAAGAGGATgggatttgaatt
tgaattgaaaagaAGAGTGGCGgttgtaaacaaagatggcggatgaTAAA
tgtaaacaatgaaaatgaaagtgaaactaAATCTTGCGATGGCTGTGAAC
GTTATATATTTCCAGACAAATAGATTTACTTTGCTTTGAAACACTTTTCA
TTGCTTGCTGTGGATTTTGGGGAATAACAGAAGCTAGAGGTAACCAACCC
TATTGGGACTGCCCCATTATCTGAAGTGATCCAGCCCAAGATTTGAAATG
CAAGCGTCACCACCACAAACCAACACACAAGTGACTGTCGTCAATGAATT
GAAAACGTGTGATCGATGCGACAAAAAGTATAAAGGTAATGCTGGACTGA
AGAATCATCAAAGATTCTGTAAAGCAAAACCAAAAACAGCTCCAGCACCG
CCTCCTCTCGTCGAGACTCCAGACCAACCATCAATAGCAGAAAATGACAG
CCAACAATCAGAACAATCAATACCAACAAACATTCAAAATGAGAACCCAT
TGTATACATGGGGAGACTACGACAACACCCATGTGGTAAGAAGTATTGAA
TACATATATGAGAAGATTGTATATTGGAGGAGAAATTTATTTATGCTGCC
ATTCGGCAAAGTTGGGAAGAGCTACATTGAACAAAATAACTATCTTCTCA
ACGAATGGTTACATGACTCTCCCTTAGCAAGCATATCATTCAAAATGATA
ATGGTTATGCCTCAGTTACTTCTTCAAAAGCCTTCACCGAAATCCAAAGC
GAAAGATCACAGTGCTCACCTAAAAAGAAGGCTAGAGCTTTGGATGAAAG
GAGAATTCCATCAACTGCTAGAGGAAAGTACATCAATTCAACAGAACTTA
AAAAGTTCGAGCAAACCAAAAACAATCGCGGAAACCTCGAAACGCTTCCT
GAAAGAAATGCAGAGAGGCAACATTAATGGAGCCATAAAAATCCTGACAA
ATAACATGGAGAACGGCATCCTTCCCATCAATGAAAAGACTCTCCAACTT
CTTCGTCAAAAGCACCCTNGAAATTTATTTATGCTGCCATTTGGCAAAGT
TGGGAAGAGCTACATTGAACAAAATAACTATCTTCTCAACGAATGGTTAC
ATGACTCTCCCTTAGCAAGTATATCATTCAAAATGATAATGGTTATGCCT
CAGTTACTTCTTCAAAAGCCTTCACTGAAATCCAAAGCGAAAGATCACAG
TGCTCACCTAAAAAGAAGGCTGGAGCTTTGGATGAAAGGAGAGTTCCATC
AACTGCTAGAGGAAAGTACAGCAATTCAACAGAACTTGAAAAGTTCGAGC
AAACCAAAAGCAATCGCGGAAACCTCGAAACGCTTCCTGAAAGAAATGCA
GAGAGGCAACATTAATGGAGCCATAAAAATCCTGACAAATAACATGGAGA
ACGGCATCCTTCCCATCAATGAAAAGACTCTCCAACTTCTTCGTCAAAAG
CACCCTGAGGCGAAGGAACCACCAGAAAACGCATTGCTGACCGACGAGGA
AAAGCCAGTCCATCCGATCAAATTCGAAATGATTGACGAGGAGATGTTGA
GAAAAGCTGCATCGACAACGAAAGGTGGTGCCGGTCCATCGGGGCTGGAT
GCAAATAGCTGGTGCAGAATTTTAACATCGAACTGTTATGGCACCAGATC
TTCTGATCTATGTAAAACACTAGCCTTAGTGATAAAAAGGCTATGCACCG
AAAAAGTGAACTCCTTATCAATCGAAGCACTTTTGGCATCTAGACTTATA
CCACTGGACAAAAACCCTGGACTTCGCCCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTCAACGA
AAGCATTTTCTTCACGAATACAACGAAAGCCACGGCATCAAAAGAGAAAT
CCGTTCCGAAAAATCCAAGAGACAAGAAGCCAGACGGAAAACCATAATCG
AACAACTTCCGATCCACCAGCGAAAGGCCGTTGAAATAAGTTCCGAAAAA
GGCGCTTCTATCTGGTTGACGAAGCTACCTCTTCTTGAAGAGGGGTACAA
TATCCTAAAGAACGTATTTTGGGACTTGATTCGCCTTCGATACGGGTGGA
ATCTAAAACGTCTACCAGCCAAATGCGAGTGTGGTGAAACGTTTACGANT
GTGGTTGCGAAGAAAGATTTCATTCTCCCTAATAAGCGCTGTTGCTATGT
GTATTAGAGGAAGCCGATCGTGTAGGTCGCAGAAAGAACTGTTAGATTTT
TCTATACATTACTCAATCTTATAGTTTTCTTCGTTCGAGTTAGCAGTATT
CAACTCTacaatttctcatcattttcaaGTCTTAGCAACGTTTTTCGGGT
CGtgccagttttttttttttcttggcaCCATTTTTATTATATATTGTAGA
TTCTATGATCATGAGGTCTAGTGGTTATATTATTAATATTTACCTTACAa
tatttacttgatattttagtattttagtCTGGTGGTCTGATCAACACTGA
AATTTTCGCAGGATTAGCCACTTCAACACTATTACAACTCAACCGAACTT
TTCCTAGTCAACCACTACAACACCAACAATCTATaattcctgtttttttt
tttgttttttgttttttctgcaattttgcgagctctgtcagtatccttga
gttttgttttgtgttttgttgcTACAGTTTTACGGTTTTACAATCTGCAA
TTTTGTGAGCTCTGTCACTATtcttgagttgttttttttttgttgttttt
ttgtgtgtgtgtgtgtgtgttttgtttctacgtcatatttttttcataga
atataattatctttttatttaaatatgattatttttacataggacgaata
gccattgtaaaatatggaagagcctgaaagacaattaataaaaaaaaaat
ataaaaaaaaataaaaaaaactagacAAGGGTAACCCCATTGTCAGTGAA
ACAATTGCAAAtatctaattttatttttttatctaatCTTATCATTTTTA
CCATGTTTTATCATCAAGATCCATACCGGGATAGGCTCCGGCTATAGCCT
TagctttttaatttattatatatatatttttctgtaAGCTATGTAAATAT
TCGATTTTACTACGTATACGTTTTTGTGATAAAGACaaagtatttttcct
ttttttcttctaaaaaaaaaaaaaaaaaaaaaaaaaaaaggggttaaaaa
agggaaaaagccctaaaaaatgaaataaatttttggatcttttttttttt
tttttttaaaaaaaaaaagaaaaaaaatttttttttttcaaaaaaaaaaa
aaaaaaaaaagaagaagagaggAAAAGTCGTACAAGCCAGTACAAGCGAA
TGAAATTATGGagattttttactctttttttttaattcaccgCGCGTTgt
tctttttattgattttattaaaTCGAGTCGCAGAAGATTTGCAAAAAACA
CGTAGAAACATGGAATCGGCGTTCTTGATAAgttcaaaacttttcttttt
tccagATACGATTTCGCTAACAATGAATATTACAAAAAGCAACTTGAAAC
AACAGCTAGATTTCCtaaaagtaagtttttttggaaaatgatcACCAACC
ACAAAAAAAGATTGTTCAAGTCAAATTTATCAgtacttcaaaaaatcaaa
ccgCCTCATCATCCCTTGAATTAATCTTGCTATTGTATGAGTTATTTCTT
CTGAATTCTCAGCTGTCAAGTataccaatcaaatcaaatgatgtttgatc
aaattttggtttgacaTTTACCTCACTCTGAAAGAGGGCCTCTTTTAAca
tgtttatttttatgtttaaagAGTTGGTTTTGAAAGTTGGTGCACAAGTG
ATGTTATTGAGCAATAAAGATGTGAGAGGTGGTCTTGTTAATGGTGCCAG
AGGTGTTGTCATCAATTTCTTCGATCGAAAAAACCCCGCCGTAAGAAATt
actttatatttattttcagaAGTATTCTGAAATGAGATCAATTTCCTTTA
GAGGCTTTTGAAGGTGCAATATGATTTAAGTGTCATTAGCTTAGCTAcga
ttgaaaatttattttcaaatgttaattTTCGCATTTTCCAAAAGCAACGG
AGCTTGCGTATGATATTCACATATATCTAGAGGTTGAAAACTTTcccatc
cttttttgaaaagcgcAATGAATGGTTTTTCTTTATCgagattttctttt
cagaatgaaatgtttgatgagGAGGAAGAGTCAGGATGTGACGAAGTCCT
CCCCGTTGTCAGGTGAGATAGTTCATTGTGATTGTTTACCTTATTAGACA
ACTTTAGTGAGGAATTTCATCGAGTTGATTACTGTCTGTAACACTGGTAG
TAAATGATACGGGAAAACTTATACGCGCCAAGTTTACAGCCGGCAATTGC
AGTAGTAAGAGAGAAAATTTGTCGCGGTAGTTTTGAAGACCGCTAGTCTT
ACCTACCGGATGTAAACTCGAATCGACAGCAAAGCCAATGGCAAATGTCC
TTTTGGCTTGGAGCTTATTTCTTTGATAATGGTTAGTCTTAGACTATTGT
ATAGTCTAGAAAAGCAAAATGATTTCAGATGGTGGCATAAatgtttgatt
atatttttaTCCTTCAAGGTTTGCGAACAACACTGAAATATTAATCAATG
CAGAACAAAATACGATCCTTCAGGGTGGCAAAACGATGGCATATCGCTCA
CAAATCCCTCTGCAATTGGCGTGGGCTGTCAGTGTTCATAAATCTCAAGT
ATGATCTCTTTTTATCTTACTTTTAGTTTCATTAGTTTCGGAAACTtaca
gttttttcatttttcaatcatACTTTTCAATGGAGAATTTACCCAATTTA
GTGTCTTTATTGGCAAGGAAATCTAAACATTCATTTCAAGTTCGAAAGGT
GTAACAACCTCAGTGAATTCCAAAATTGGGAACACCCCTGTCTTACAGCC
CCGTTGGAACTTTTTTGCTCAGCGGggataaaattttttattgaaatccc
aatggggatagaaattctattgttccaatgttaaaaaatccagtggggga
TAGTTTTggattgcaatttttaaacatggaatttcgaatggggacgaaat
caaagtcaatttccaagtggggctgaaattacagggtttttcccaccggg
gactaaacttttctcaaactttccagtggggctggggtcccagtgggtct
atgacacaggggtgtttggGAGATCAAACCCTTCTCTGCACTATAGCAAT
GAACCACTGCAAAATATCTTCTTTAACCGACAGGGTGTAACGTTGGATCG
AGTAGAGATTGATCTCGCCAAAGCCTTTGAACATGGACAATCATATGTTG
CATTATCGCGTGTAACTAGTCTTGATGGCTTGTTGTTGAGGtaaatttca
taaattattaTGATCTGTTCCCGAACCTACGGTTGTCAGAAAGATGTTTA
GGTCTTTTCAAAGGGTTGCGTTTATATTTACGCTTCCTCAGACACAGGCA
TTTCAAGCTATTCACAAGAAACCAGATCATATCATCATTTTAATGAAAGG
GCTAGAATATTAGCGAGTACCCTACTAAAAGCTAGGATTTTTTATTCGTA
GAAAAAAGCCGCGACGTTTGGTAAAGGCTACTAGAATACCGGTCTTCGAC
TTTCACCCTTAGCTAATTTGTGAttaagttgttgttgttgcataTCTTAG
Gtttactttaaccggattaaatttcgcgagattaaatttcacgagctaaa
aaaatcgcgaaattttctagatttaatttcgcgagtcaaatggagacttg
gaactagtttctccgccaaaaatacaattttaaaagttttatggtggatt
taatttggcgaatcaggaatctcacgcgtgttggcgagttttaatttcgc
gaaaatggcaaaattcgtgaaatcgcgaaatttaatctcgcgaaaattaa
tccgattaaagtaacaCTCTTATTTTTATCTTAGAGCCTTCGATCCCAAG
AAAGTTACGGCTCATCCAAAAGTGTTGAATTATTATTCATCGCTAGATCC
CAGTTTCCCACACTGTACCAAGAGCATGGGTGaacgtgatttgaaagatt
ttctcagCCAAAGGAACGATTTATCCAACTATAAGCGACGCATCGCTTTG
CTAACCAGGTAAAACTTTCGTTCTTGATTAAAAAAACGCTCTAAGCAAAT
TTTTTCGTAGTTGTACGTCTTTTgtaattccaagaattttgccCTCTGAC
ATTAATGCACGGAAATCAGTGTGCAAAGTTATGCTAAAATGTTACTTCCT
TCTATTTCAGTATAAAACAAGATCAGTCGGACCAGAACATTAAag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020174TCONS_00020174Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020174-proteinTCONS_00020174-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:367030..377524 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.61	11.29	13.75	11.02	22.58	17.43	15.24	15.64	7.61	11.76	8.7	5.56	6.59	5.13	6.73	8.05	10.25	10.19	4.32	5.33	6.31	6.75	14.73	14.86	13.9	16.06	10.54	9.04	14.85	16.43