TCONS_00021908 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021908
Unique NameTCONS_00021908
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4092

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021908 ID=TCONS_00021908|Name=TCONS_00021908|organism=Clytia hemisphaerica|type=transcript|length=4092bp
CGACTCATAAAATTTGAGGGTAAACAATATTTTGTGTGAAGCACCTTCTT
CTAACATAGCCTTGTTTGAATGAATTACAGACCTGAACTTTGACACAGTT
AAAAGCACGAGTGCGTGAAAAAGCAACATACAATTGTCCATGTGAAAAAC
ATGGCCTTCGTAAAGAGATACCAACTTTATCATACGTTTGGCCTTGACTT
TTGTTGATAGTAACCGCATAAGATAACCTGACTGGAAACTGGACTCTTTT
GAGTTGGAAAGGCAAGTGAGTATCATTAGGACAAAAAGTAATTCTAGGGA
TTAAAGTTCTTTGACCTGTATGAAAACCGGTGAGAATCTCGGCATCGATG
ATATTATCCTGTAGATTGCGAATGATAAGTCTAGTTCCATTACAGAGGCC
ATCTTTTATGGAAAGATTTCTAAGTAGCATAATAACAGAGCCTACTTTTA
AATTCAACCTGTGTTTTGGCATTCCGCTAGGTGTAATAGAATTTATAAAT
TCTTGAGGGTAAAGGTCAACTTCTTCTTGGGTATCAGCAACAACAGAATC
AAAGCTAGTGTAAGTATGAATATCCCCGGGCAGACGACCCAAAATTTGCT
CATTGATTTCAAGGGCTTCTTCATTTGTTGGAGTCAGAATAACCCTTTTT
GTAAAGTCACCCCCATCTTCAAAGTTACCAAAAACATGCTCAATTAAATC
AGAATCAGTGGAAATTGCACACTGGTCAGGGATTTGAATACTACCAAGAT
ATGGATCAGTTTGTTTTGTCGGCAGATTTCCCTCACCTAACTGcagaaga
aaatttgaaaattccatcTCACCTGGTCCTGCCCGCACATTTTGATGAAG
GTGAAAAATTTGGACAAGGGGCCAAAGCTGGCTGCTTTTCAAACAGCTTT
CTACCACCTGAGCAGCACTTCCCCTTTTAACGACAGGGAGTGTTTGTCTA
AAATCACCACCAAGCAGAATTACCTTACCAGCAAATGGTATATGGCTGCT
ACATATGTCTCTCAGCATAATATCCACAGCCTCTAGTGCATACTTTGGAA
TCATGGAGCTTTCATCAAAGATGAAAATATCTTGATCTCTCAAAAAGGCT
GCATGTGTACTGTTTGGTTTCACATTACATGTAGAACCATCATTGATGGG
CACTGGCAACTTAAACAGACTGTGGCAAGTTTTTCCACCATCTAGAAGAG
TTGCTGCAATTCCAGTCCAAGAAGAAGTGGCAACAGAGAATGATCGAGCC
CTGGCTTCTTTTATAATGTAATTGTATGTGAAAGTTTTTCCTGTCCCCCC
TGGCCCATCTAAGAAAAAAAGCTTGGTAGAGTTATGATCATTATTAGAAA
GAGCTTCAAGAACTACATCTGCTACAATGGTTTGGTCATTATTTAACAAC
GGCCTAATTTCAGCAGCTTCTTGTCTGTTTGCTTCTGCATCTGGCAGTTG
CTCTACAAGTCCAAAATCTAAATGAGGTAGATTAAAATCATCCAAAGATT
TGCCAAACTGCTTAAGCATAAGTTCAATGTGTGCCAATGCCATCTGTTCA
GCTTGCAATTCAACATGTTGTCTCAAAAAGTCTTGCATCATAAATTCTTT
GTAGTTCTCCCAAAGATCTGCTGGATTGTTAGGCTCACCATGAATTAGGA
TAGTGCAAAAAGTCCTTCTGACTTTCAACGGAGACGCAACATGAACTACT
TCATTTAAGGTGTCAACCCAGATATTATCATTAGCAAGTAGTCCCCTCGC
CAAACATGCTTCTCTGAAAGTTGGATAAAGGACCccatcaaaagttttca
aaaattcaaaagatgTTGCTCCTGGCACATGCAATAACAGAACTCTCAAA
AAATACCTTTCACCTTCACGAATGCTAGCATTATACATCCTACTTATGAC
TGTGCCACGCTCTCTTGCTTTCCAACGGTTGTTATTAAAGACATAATCAT
GAGGGATATCAGAATATAGAATTTGCCTAGAAGTGGGatcattttgattt
aacaaaaaCCAGGCAGTTAGTTTAGTTTCCTTTTGCTCAGCTCTTTGAAC
AGCGTTTCCTTCTTCACCTGGGCGAAAATATACTCTTTGGAAATTTGGTA
GATGTACAGCTAACCTAACCACATTATGACTTTGAGTGTGCATATCAAAC
TTAAACAAACGCCAACAACCTTCAGGAGCTGAAACATATCGTGCATCAAG
GAAAGTCTTGATTTCATCATGATCAAGTCTCTCTGATATTTCAATATGAG
CTGTGTCATGACCTTTGTAGATGTATTTATAAAGATATTGGACTGCTTTT
ATTGAAACACAGGCTTCCAAATTGATGTGGGCAttatattttttgcacaa
atagGGAGAGTAGGGCACCACCCACCTATTGTCTAGATCAACATTTCTCA
CTCGAACTGTGCGACCATTATCTGGTCTATGATAAAGTGGAAAACCATCC
ACATTCATAACTGTGGCATCATTAAAAGACTTAGGATAGCCTTTTGAGCA
GCTACCATCTTTCATGCAAGGACAGGTGTTGTTCAAAACACCACAGGGTC
CATGAATCATATTAGCTTTTATAATTTCATAGAGCACCGGCTCTGTCTCT
GGATCAGGAAGCTGCGCACAAATCAAGCGGTCAATATCGTCAGCATTTCT
CAGTTTAAACTCAGCTTCAAAATGAATTAGAAGATGGGCATGAGGAAGCC
CACGTTTCTGAAATTCAATCACATCAACACGGGCTACAACCATACCTAAA
ATACCATCCTTCATTATTTCTTTCTTCATTGCAGCTAACTTCATTCGAAA
GACACGCGTAAGTAAATCTGGCCTGTCATGGGCCCGTTGGTTTGGAAGTA
AATTTTCAGTTATCTCTCTCCACTTAGGATTGCAGGTGAATGTCAGAAAA
GTGTCTGGCTTTCCGTGCTTCGCAACAACAGCCATGGCATCTAGATACAA
TTGGTGCATAGCCCGAGGGGATCCCGAAAATGAAGAAGGCAAAACAATGA
CCTGACCTGCATTTAAATCCCTCTGTTGCGCAGCATTTTCAAGATGGTCT
ACAAGGCCCTGATATGAATCTGCCCTTATTTCTTGTTGATGGAACCGATG
GTAGTTTAGCCTATTACCTTCCACCTTAGTATATGCATCAACAATGAACT
GTTGGAAAAGTTTCCCTGAAAGGTGAAGAGCAGAGAACCCTCTACGAATA
GCTAACCTATATGCGTAATATTCAAGTTGTGTGACATGGTTCCTCTGTCT
TGAAGCTCTTTCAGCTACATGGGGAAGGGTCCTATCCCAGCCTGGGTCAC
CCCTTGGAAAGAGAAGTGGGTAAACTAAAGGATCCACAATACTGGATATG
ATTGAAATGGTTCGGAGAGGTGCGTTTCGTGGATGCACAACAATACTCAT
ATCACCTGGTGGAGCTCCATCGTCCCCCGAAAAAACAGCAGCAACCTCTT
CATGCAAAGGAGCATTATATCTTCTCTGATCAGGACCCTCAAACATCTTC
ATTCGGACAATTGGCAGCGGCCTATTTTCAGCTGCAGCTTGACGATGTTC
TTCTTGCTCAACTTGACGCAAATGTTTGTAAGTGGCAGCATAAGGATTAA
TATTATCAAGAATATCTTGAATGAGGGCCATAGTCTCACGATTGCACTCT
GCTGCTGAAGGATTTTGCATTCTCAAGTTCAAAGCAGTAGCTGCCTCAAT
TATATACAGTTGAGCAAATTGTGGTTGCTGTTGATCTGGAAAAACATTGC
CAAGACGGTGGACAATTTGACCGCATATTCTGAAAGTTGGAGGTCCGTTA
CCTGGAGGTGGTCTCAAATTAGCACAAAAGGAGGCAAAAGCAAAGGCATT
GTTATAGATCCTAATATTTTTACGAAAAAGTTTTGATTGGTTTGAATTAT
TGCTAAAGAGATGCTCAAGCTGAGGTGGAAAAGGATCTAATTGCGGAAGA
GCGACTTTCCCTTTTTCACAACATCTAAATTCATCTTCATNgaatgctgt
aagaatattttaggatgattttcccaaaaaagttaagaatatccatgatg
aaatggatttacaccattcttataaaaaaaagcgtgtagaat
Run BLAST on NCBI

protein sequence of TCONS_00021908-protein

>TCONS_00021908-protein ID=TCONS_00021908-protein|Name=TCONS_00021908-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1221bp
MQNPSAAECNRETMALIQDILDNINPYAATYKHLRQVEQEEHRQAAAENR
PLPIVRMKMFEGPDQRRYNAPLHEEVAAVFSGDDGAPPGDMSIVVHPRNA
PLRTISIISSIVDPLVYPLLFPRGDPGWDRTLPHVAERASRQRNHVTQLE
YYAYRLAIRRGFSALHLSGKLFQQFIVDAYTKVEGNRLNYHRFHQQEIRA
DSYQGLVDHLENAAQQRDLNAGQVIVLPSSFSGSPRAMHQLYLDAMAVVA
KHGKPDTFLTFTCNPKWREITENLLPNQRAHDRPDLLTRVFRMKLAAMKK
EIMKDGILGMVVARVDVIEFQKRGLPHAHLLIHFEAEFKLRNADDIDRLI
CAQLPDPETEPVLYEIIKANMIHGPCGVLNNTCPCMKDGSCSKGYPKSFN
DATVMNVDGFPLYHRPDNGRTVRVRNVDLDNRWVVPYSPYLCKKYNAHIN
LEACVSIKAVQYLYKYIYKGHDTAHIEISERLDHDEIKTFLDARYVSAPE
GCWRLFKFDMHTQSHNVVRLAVHLPNFQRVYFRPGEEGNAVQRAEQKETK
LTAWFLLNQNDPTSRQILYSDIPHDYVFNNNRWKARERGTVISRMYNASI
REGERYFLRVLLLHVPGATSFEFLKTFDGVLYPTFREACLARGLLANDNI
WVDTLNEVVHVASPLKVRRTFCTILIHGEPNNPADLWENYKEFMMQDFLR
QHVELQAEQMALAHIELMLKQFGKSLDDFNLPHLDFGLVEQLPDAEANRQ
EAAEIRPLLNNDQTIVADVVLEALSNNDHNSTKLFFLDGPGGTGKTFTYN
YIIKEARARSFSVATSSWTGIAATLLDGGKTCHSLFKLPVPINDGSTCNV
KPNSTHAAFLRDQDIFIFDESSMIPKYALEAVDIMLRDICSSHIPFAGKV
ILLGGDFRQTLPVVKRGSAAQVVESCLKSSQLWPLVQIFHLHQNVRAGPG
EMEFSNFLLQLGEGNLPTKQTDPYLGSIQIPDQCAISTDSDLIEHVFGNF
EDGGDFTKRVILTPTNEEALEINEQILGRLPGDIHTYTSFDSVVADTQEE
VDLYPQEFINSITPSGMPKHRLNLKVGSVIMLLRNLSIKDGLCNGTRLII
RNLQDNIIDAEILTGFHTGQRTLIPRITFCPNDTHLPFQLKRVQFPVRLS
YAVTINKSQGQTYDKVGISLRRPCFSHGQLYVAFSRTRAFNCVKVQVCNS
FKQGYVRRRCFTQNIVYPQIL
Run BLAST on NCBI

transcript from alignment at sc0000396:190437..194528

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021908 ID=TCONS_00021908|Name=TCONS_00021908|organism=Clytia hemisphaerica|type=transcript|length=4092bp|location=Sequence derived from alignment at sc0000396:190437..194528 (Clytia hemisphaerica)
attctacacgcttttttttataagaatggtgtaaatccatttcatcatgg atattcttaacttttttgggaaaatcatcctaaaatattcttacagcatt cNATGAAGATGAATTTAGATGTTGTGAAAAAGGGAAAGTCGCTCTTCCGC AATTAGATCCTTTTCCACCTCAGCTTGAGCATCTCTTTAGCAATAATTCA AACCAATCAAAACTTTTTCGTAAAAATATTAGGATCTATAACAATGCCTT TGCTTTTGCCTCCTTTTGTGCTAATTTGAGACCACCTCCAGGTAACGGAC CTCCAACTTTCAGAATATGCGGTCAAATTGTCCACCGTCTTGGCAATGTT TTTCCAGATCAACAGCAACCACAATTTGCTCAACTGTATATAATTGAGGC AGCTACTGCTTTGAACTTGAGAATGCAAAATCCTTCAGCAGCAGAGTGCA ATCGTGAGACTATGGCCCTCATTCAAGATATTCTTGATAATATTAATCCT TATGCTGCCACTTACAAACATTTGCGTCAAGTTGAGCAAGAAGAACATCG TCAAGCTGCAGCTGAAAATAGGCCGCTGCCAATTGTCCGAATGAAGATGT TTGAGGGTCCTGATCAGAGAAGATATAATGCTCCTTTGCATGAAGAGGTT GCTGCTGTTTTTTCGGGGGACGATGGAGCTCCACCAGGTGATATGAGTAT TGTTGTGCATCCACGAAACGCACCTCTCCGAACCATTTCAATCATATCCA GTATTGTGGATCCTTTAGTTTACCCACTTCTCTTTCCAAGGGGTGACCCA GGCTGGGATAGGACCCTTCCCCATGTAGCTGAAAGAGCTTCAAGACAGAG GAACCATGTCACACAACTTGAATATTACGCATATAGGTTAGCTATTCGTA GAGGGTTCTCTGCTCTTCACCTTTCAGGGAAACTTTTCCAACAGTTCATT GTTGATGCATATACTAAGGTGGAAGGTAATAGGCTAAACTACCATCGGTT CCATCAACAAGAAATAAGGGCAGATTCATATCAGGGCCTTGTAGACCATC TTGAAAATGCTGCGCAACAGAGGGATTTAAATGCAGGTCAGGTCATTGTT TTGCCTTCTTCATTTTCGGGATCCCCTCGGGCTATGCACCAATTGTATCT AGATGCCATGGCTGTTGTTGCGAAGCACGGAAAGCCAGACACTTTTCTGA CATTCACCTGCAATCCTAAGTGGAGAGAGATAACTGAAAATTTACTTCCA AACCAACGGGCCCATGACAGGCCAGATTTACTTACGCGTGTCTTTCGAAT GAAGTTAGCTGCAATGAAGAAAGAAATAATGAAGGATGGTATTTTAGGTA TGGTTGTAGCCCGTGTTGATGTGATTGAATTTCAGAAACGTGGGCTTCCT CATGCCCATCTTCTAATTCATTTTGAAGCTGAGTTTAAACTGAGAAATGC TGACGATATTGACCGCTTGATTTGTGCGCAGCTTCCTGATCCAGAGACAG AGCCGGTGCTCTATGAAATTATAAAAGCTAATATGATTCATGGACCCTGT GGTGTTTTGAACAACACCTGTCCTTGCATGAAAGATGGTAGCTGCTCAAA AGGCTATCCTAAGTCTTTTAATGATGCCACAGTTATGAATGTGGATGGTT TTCCACTTTATCATAGACCAGATAATGGTCGCACAGTTCGAGTGAGAAAT GTTGATCTAGACAATAGGTGGGTGGTGCCCTACTCTCCctatttgtgcaa aaaatataaTGCCCACATCAATTTGGAAGCCTGTGTTTCAATAAAAGCAG TCCAATATCTTTATAAATACATCTACAAAGGTCATGACACAGCTCATATT GAAATATCAGAGAGACTTGATCATGATGAAATCAAGACTTTCCTTGATGC ACGATATGTTTCAGCTCCTGAAGGTTGTTGGCGTTTGTTTAAGTTTGATA TGCACACTCAAAGTCATAATGTGGTTAGGTTAGCTGTACATCTACCAAAT TTCCAAAGAGTATATTTTCGCCCAGGTGAAGAAGGAAACGCTGTTCAAAG AGCTGAGCAAAAGGAAACTAAACTAACTGCCTGGtttttgttaaatcaaa atgatCCCACTTCTAGGCAAATTCTATATTCTGATATCCCTCATGATTAT GTCTTTAATAACAACCGTTGGAAAGCAAGAGAGCGTGGCACAGTCATAAG TAGGATGTATAATGCTAGCATTCGTGAAGGTGAAAGGTATTTTTTGAGAG TTCTGTTATTGCATGTGCCAGGAGCAAcatcttttgaatttttgaaaact tttgatggGGTCCTTTATCCAACTTTCAGAGAAGCATGTTTGGCGAGGGG ACTACTTGCTAATGATAATATCTGGGTTGACACCTTAAATGAAGTAGTTC ATGTTGCGTCTCCGTTGAAAGTCAGAAGGACTTTTTGCACTATCCTAATT CATGGTGAGCCTAACAATCCAGCAGATCTTTGGGAGAACTACAAAGAATT TATGATGCAAGACTTTTTGAGACAACATGTTGAATTGCAAGCTGAACAGA TGGCATTGGCACACATTGAACTTATGCTTAAGCAGTTTGGCAAATCTTTG GATGATTTTAATCTACCTCATTTAGATTTTGGACTTGTAGAGCAACTGCC AGATGCAGAAGCAAACAGACAAGAAGCTGCTGAAATTAGGCCGTTGTTAA ATAATGACCAAACCATTGTAGCAGATGTAGTTCTTGAAGCTCTTTCTAAT AATGATCATAACTCTACCAAGCTTTTTTTCTTAGATGGGCCAGGGGGGAC AGGAAAAACTTTCACATACAATTACATTATAAAAGAAGCCAGGGCTCGAT CATTCTCTGTTGCCACTTCTTCTTGGACTGGAATTGCAGCAACTCTTCTA GATGGTGGAAAAACTTGCCACAGTCTGTTTAAGTTGCCAGTGCCCATCAA TGATGGTTCTACATGTAATGTGAAACCAAACAGTACACATGCAGCCTTTT TGAGAGATCAAGATATTTTCATCTTTGATGAAAGCTCCATGATTCCAAAG TATGCACTAGAGGCTGTGGATATTATGCTGAGAGACATATGTAGCAGCCA TATACCATTTGCTGGTAAGGTAATTCTGCTTGGTGGTGATTTTAGACAAA CACTCCCTGTCGTTAAAAGGGGAAGTGCTGCTCAGGTGGTAGAAAGCTGT TTGAAAAGCAGCCAGCTTTGGCCCCTTGTCCAAATTTTTCACCTTCATCA AAATGTGCGGGCAGGACCAGGTGAgatggaattttcaaattttcttctgC AGTTAGGTGAGGGAAATCTGCCGACAAAACAAACTGATCCATATCTTGGT AGTATTCAAATCCCTGACCAGTGTGCAATTTCCACTGATTCTGATTTAAT TGAGCATGTTTTTGGTAACTTTGAAGATGGGGGTGACTTTACAAAAAGGG TTATTCTGACTCCAACAAATGAAGAAGCCCTTGAAATCAATGAGCAAATT TTGGGTCGTCTGCCCGGGGATATTCATACTTACACTAGCTTTGATTCTGT TGTTGCTGATACCCAAGAAGAAGTTGACCTTTACCCTCAAGAATTTATAA ATTCTATTACACCTAGCGGAATGCCAAAACACAGGTTGAATTTAAAAGTA GGCTCTGTTATTATGCTACTTAGAAATCTTTCCATAAAAGATGGCCTCTG TAATGGAACTAGACTTATCATTCGCAATCTACAGGATAATATCATCGATG CCGAGATTCTCACCGGTTTTCATACAGGTCAAAGAACTTTAATCCCTAGA ATTACTTTTTGTCCTAATGATACTCACTTGCCTTTCCAACTCAAAAGAGT CCAGTTTCCAGTCAGGTTATCTTATGCGGTTACTATCAACAAAAGTCAAG GCCAAACGTATGATAAAGTTGGTATCTCTTTACGAAGGCCATGTTTTTCA CATGGACAATTGTATGTTGCTTTTTCACGCACTCGTGCTTTTAACTGTGT CAAAGTTCAGGTCTGTAATTCATTCAAACAAGGCTATGTTAGAAGAAGGT GCTTCACACAAAATATTGTTTACCCTCAAATTTTATGAGTCG

Coding sequence (CDS) from alignment at sc0000396:190437..194528

>TCONS_00021908 ID=TCONS_00021908|Name=TCONS_00021908|organism=Clytia hemisphaerica|type=CDS|length=3666bp|location=Sequence derived from alignment at sc0000396:190437..194528 (Clytia hemisphaerica)
ATGCAAAATCCTTCAGCAGCAGAGTGCAATCGTGAGACTATGGCCCTCAT
TCAAGATATTCTTGATAATATTAATCCTTATGCTGCCACTTACAAACATT
TGCGTCAAGTTGAGCAAGAAGAACATCGTCAAGCTGCAGCTGAAAATAGG
CCGCTGCCAATTGTCCGAATGAAGATGTTTGAGGGTCCTGATCAGAGAAG
ATATAATGCTCCTTTGCATGAAGAGGTTGCTGCTGTTTTTTCGGGGGACG
ATGGAGCTCCACCAGGTGATATGAGTATTGTTGTGCATCCACGAAACGCA
CCTCTCCGAACCATTTCAATCATATCCAGTATTGTGGATCCTTTAGTTTA
CCCACTTCTCTTTCCAAGGGGTGACCCAGGCTGGGATAGGACCCTTCCCC
ATGTAGCTGAAAGAGCTTCAAGACAGAGGAACCATGTCACACAACTTGAA
TATTACGCATATAGGTTAGCTATTCGTAGAGGGTTCTCTGCTCTTCACCT
TTCAGGGAAACTTTTCCAACAGTTCATTGTTGATGCATATACTAAGGTGG
AAGGTAATAGGCTAAACTACCATCGGTTCCATCAACAAGAAATAAGGGCA
GATTCATATCAGGGCCTTGTAGACCATCTTGAAAATGCTGCGCAACAGAG
GGATTTAAATGCAGGTCAGGTCATTGTTTTGCCTTCTTCATTTTCGGGAT
CCCCTCGGGCTATGCACCAATTGTATCTAGATGCCATGGCTGTTGTTGCG
AAGCACGGAAAGCCAGACACTTTTCTGACATTCACCTGCAATCCTAAGTG
GAGAGAGATAACTGAAAATTTACTTCCAAACCAACGGGCCCATGACAGGC
CAGATTTACTTACGCGTGTCTTTCGAATGAAGTTAGCTGCAATGAAGAAA
GAAATAATGAAGGATGGTATTTTAGGTATGGTTGTAGCCCGTGTTGATGT
GATTGAATTTCAGAAACGTGGGCTTCCTCATGCCCATCTTCTAATTCATT
TTGAAGCTGAGTTTAAACTGAGAAATGCTGACGATATTGACCGCTTGATT
TGTGCGCAGCTTCCTGATCCAGAGACAGAGCCGGTGCTCTATGAAATTAT
AAAAGCTAATATGATTCATGGACCCTGTGGTGTTTTGAACAACACCTGTC
CTTGCATGAAAGATGGTAGCTGCTCAAAAGGCTATCCTAAGTCTTTTAAT
GATGCCACAGTTATGAATGTGGATGGTTTTCCACTTTATCATAGACCAGA
TAATGGTCGCACAGTTCGAGTGAGAAATGTTGATCTAGACAATAGGTGGG
TGGTGCCCTACTCTCCctatttgtgcaaaaaatataaTGCCCACATCAAT
TTGGAAGCCTGTGTTTCAATAAAAGCAGTCCAATATCTTTATAAATACAT
CTACAAAGGTCATGACACAGCTCATATTGAAATATCAGAGAGACTTGATC
ATGATGAAATCAAGACTTTCCTTGATGCACGATATGTTTCAGCTCCTGAA
GGTTGTTGGCGTTTGTTTAAGTTTGATATGCACACTCAAAGTCATAATGT
GGTTAGGTTAGCTGTACATCTACCAAATTTCCAAAGAGTATATTTTCGCC
CAGGTGAAGAAGGAAACGCTGTTCAAAGAGCTGAGCAAAAGGAAACTAAA
CTAACTGCCTGGtttttgttaaatcaaaatgatCCCACTTCTAGGCAAAT
TCTATATTCTGATATCCCTCATGATTATGTCTTTAATAACAACCGTTGGA
AAGCAAGAGAGCGTGGCACAGTCATAAGTAGGATGTATAATGCTAGCATT
CGTGAAGGTGAAAGGTATTTTTTGAGAGTTCTGTTATTGCATGTGCCAGG
AGCAAcatcttttgaatttttgaaaacttttgatggGGTCCTTTATCCAA
CTTTCAGAGAAGCATGTTTGGCGAGGGGACTACTTGCTAATGATAATATC
TGGGTTGACACCTTAAATGAAGTAGTTCATGTTGCGTCTCCGTTGAAAGT
CAGAAGGACTTTTTGCACTATCCTAATTCATGGTGAGCCTAACAATCCAG
CAGATCTTTGGGAGAACTACAAAGAATTTATGATGCAAGACTTTTTGAGA
CAACATGTTGAATTGCAAGCTGAACAGATGGCATTGGCACACATTGAACT
TATGCTTAAGCAGTTTGGCAAATCTTTGGATGATTTTAATCTACCTCATT
TAGATTTTGGACTTGTAGAGCAACTGCCAGATGCAGAAGCAAACAGACAA
GAAGCTGCTGAAATTAGGCCGTTGTTAAATAATGACCAAACCATTGTAGC
AGATGTAGTTCTTGAAGCTCTTTCTAATAATGATCATAACTCTACCAAGC
TTTTTTTCTTAGATGGGCCAGGGGGGACAGGAAAAACTTTCACATACAAT
TACATTATAAAAGAAGCCAGGGCTCGATCATTCTCTGTTGCCACTTCTTC
TTGGACTGGAATTGCAGCAACTCTTCTAGATGGTGGAAAAACTTGCCACA
GTCTGTTTAAGTTGCCAGTGCCCATCAATGATGGTTCTACATGTAATGTG
AAACCAAACAGTACACATGCAGCCTTTTTGAGAGATCAAGATATTTTCAT
CTTTGATGAAAGCTCCATGATTCCAAAGTATGCACTAGAGGCTGTGGATA
TTATGCTGAGAGACATATGTAGCAGCCATATACCATTTGCTGGTAAGGTA
ATTCTGCTTGGTGGTGATTTTAGACAAACACTCCCTGTCGTTAAAAGGGG
AAGTGCTGCTCAGGTGGTAGAAAGCTGTTTGAAAAGCAGCCAGCTTTGGC
CCCTTGTCCAAATTTTTCACCTTCATCAAAATGTGCGGGCAGGACCAGGT
GAgatggaattttcaaattttcttctgCAGTTAGGTGAGGGAAATCTGCC
GACAAAACAAACTGATCCATATCTTGGTAGTATTCAAATCCCTGACCAGT
GTGCAATTTCCACTGATTCTGATTTAATTGAGCATGTTTTTGGTAACTTT
GAAGATGGGGGTGACTTTACAAAAAGGGTTATTCTGACTCCAACAAATGA
AGAAGCCCTTGAAATCAATGAGCAAATTTTGGGTCGTCTGCCCGGGGATA
TTCATACTTACACTAGCTTTGATTCTGTTGTTGCTGATACCCAAGAAGAA
GTTGACCTTTACCCTCAAGAATTTATAAATTCTATTACACCTAGCGGAAT
GCCAAAACACAGGTTGAATTTAAAAGTAGGCTCTGTTATTATGCTACTTA
GAAATCTTTCCATAAAAGATGGCCTCTGTAATGGAACTAGACTTATCATT
CGCAATCTACAGGATAATATCATCGATGCCGAGATTCTCACCGGTTTTCA
TACAGGTCAAAGAACTTTAATCCCTAGAATTACTTTTTGTCCTAATGATA
CTCACTTGCCTTTCCAACTCAAAAGAGTCCAGTTTCCAGTCAGGTTATCT
TATGCGGTTACTATCAACAAAAGTCAAGGCCAAACGTATGATAAAGTTGG
TATCTCTTTACGAAGGCCATGTTTTTCACATGGACAATTGTATGTTGCTT
TTTCACGCACTCGTGCTTTTAACTGTGTCAAAGTTCAGGTCTGTAATTCA
TTCAAACAAGGCTATGTTAGAAGAAGGTGCTTCACACAAAATATTGTTTA
CCCTCAAATTTTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012295XLOC_012295Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021908-proteinTCONS_00021908-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021908-exon-sc0000396-1491911889:190437..194528TCONS_00021908-exon-sc0000396-1491911889:190437..194528Clytia hemisphaericaexon
TCONS_00021908-exon-sc0000396-1510915933:190437..194528TCONS_00021908-exon-sc0000396-1510915933:190437..194528Clytia hemisphaericaexon
TCONS_00021908-exon-sc0000396-1575043694:190437..194528TCONS_00021908-exon-sc0000396-1575043694:190437..194528Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000396supercontigsc0000396:190437..194528 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.457327 0.271372 0.266902 0.152931 0.458488 0.555397 0.660089 0.959628 0.471652 0.38245 0.555376 0.336504 0.569573 0.51463 0.760071 0.716809 1.27284 0.968084 0.860608 0.747853 0.969078 0.902233 0.424644 0.631331 0.0883615 0.192716 0.594357 0.575111 0.360301 0.342383
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like
IPR025476Helitron_helicase-like
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0000723telomere maintenance
Vocabulary: Molecular Function
TermDefinition
GO:0003678DNA helicase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0000723 telomere maintenance
molecular_function GO:0003678 DNA helicase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021908 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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