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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00021908-protein ID=TCONS_00021908-protein|Name=TCONS_00021908-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1221bp
MQNPSAAECNRETMALIQDILDNINPYAATYKHLRQVEQEEHRQAAAENR
PLPIVRMKMFEGPDQRRYNAPLHEEVAAVFSGDDGAPPGDMSIVVHPRNA
PLRTISIISSIVDPLVYPLLFPRGDPGWDRTLPHVAERASRQRNHVTQLE
YYAYRLAIRRGFSALHLSGKLFQQFIVDAYTKVEGNRLNYHRFHQQEIRA
DSYQGLVDHLENAAQQRDLNAGQVIVLPSSFSGSPRAMHQLYLDAMAVVA
KHGKPDTFLTFTCNPKWREITENLLPNQRAHDRPDLLTRVFRMKLAAMKK
EIMKDGILGMVVARVDVIEFQKRGLPHAHLLIHFEAEFKLRNADDIDRLI
CAQLPDPETEPVLYEIIKANMIHGPCGVLNNTCPCMKDGSCSKGYPKSFN
DATVMNVDGFPLYHRPDNGRTVRVRNVDLDNRWVVPYSPYLCKKYNAHIN
LEACVSIKAVQYLYKYIYKGHDTAHIEISERLDHDEIKTFLDARYVSAPE
GCWRLFKFDMHTQSHNVVRLAVHLPNFQRVYFRPGEEGNAVQRAEQKETK
LTAWFLLNQNDPTSRQILYSDIPHDYVFNNNRWKARERGTVISRMYNASI
REGERYFLRVLLLHVPGATSFEFLKTFDGVLYPTFREACLARGLLANDNI
WVDTLNEVVHVASPLKVRRTFCTILIHGEPNNPADLWENYKEFMMQDFLR
QHVELQAEQMALAHIELMLKQFGKSLDDFNLPHLDFGLVEQLPDAEANRQ
EAAEIRPLLNNDQTIVADVVLEALSNNDHNSTKLFFLDGPGGTGKTFTYN
YIIKEARARSFSVATSSWTGIAATLLDGGKTCHSLFKLPVPINDGSTCNV
KPNSTHAAFLRDQDIFIFDESSMIPKYALEAVDIMLRDICSSHIPFAGKV
ILLGGDFRQTLPVVKRGSAAQVVESCLKSSQLWPLVQIFHLHQNVRAGPG
EMEFSNFLLQLGEGNLPTKQTDPYLGSIQIPDQCAISTDSDLIEHVFGNF
EDGGDFTKRVILTPTNEEALEINEQILGRLPGDIHTYTSFDSVVADTQEE
VDLYPQEFINSITPSGMPKHRLNLKVGSVIMLLRNLSIKDGLCNGTRLII
RNLQDNIIDAEILTGFHTGQRTLIPRITFCPNDTHLPFQLKRVQFPVRLS
YAVTINKSQGQTYDKVGISLRRPCFSHGQLYVAFSRTRAFNCVKVQVCNS
FKQGYVRRRCFTQNIVYPQIL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
| GO:0000723 | telomere maintenance |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003678 | DNA helicase activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006281 |
DNA repair |
| biological_process |
GO:0000723 |
telomere maintenance |
| molecular_function |
GO:0003678 |
DNA helicase activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR010285 | DNA helicase Pif1-like | PFAM | PF05970 | PIF1 | coord: 759..1103
e-value: 4.3E-99
score: 332.0 |
| IPR025476 | Helitron helicase-like domain | PFAM | PF14214 | Helitron_like_N | coord: 151..332
e-value: 5.4E-60
score: 202.7 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 755..960
e-value: 1.0E-11
score: 44.0 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 894..962
coord: 1005..1037
coord: 1068..1206 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 755..947 |
Blast
The following BLAST results are available for this feature:
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