XLOC_012295 (gene) - C. hemisphaerica

Overview
NameXLOC_012295
Unique NameXLOC_012295
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000396:190437..194528-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012295 ID=XLOC_012295|Name=XLOC_012295|organism=Clytia hemisphaerica|type=gene|length=4092bp|location=Sequence derived from alignment at sc0000396:190437..194528- (Clytia hemisphaerica)
CGACTCATAAAATTTGAGGGTAAACAATATTTTGTGTGAAGCACCTTCTT CTAACATAGCCTTGTTTGAATGAATTACAGACCTGAACTTTGACACAGTT AAAAGCACGAGTGCGTGAAAAAGCAACATACAATTGTCCATGTGAAAAAC ATGGCCTTCGTAAAGAGATACCAACTTTATCATACGTTTGGCCTTGACTT TTGTTGATAGTAACCGCATAAGATAACCTGACTGGAAACTGGACTCTTTT GAGTTGGAAAGGCAAGTGAGTATCATTAGGACAAAAAGTAATTCTAGGGA TTAAAGTTCTTTGACCTGTATGAAAACCGGTGAGAATCTCGGCATCGATG ATATTATCCTGTAGATTGCGAATGATAAGTCTAGTTCCATTACAGAGGCC ATCTTTTATGGAAAGATTTCTAAGTAGCATAATAACAGAGCCTACTTTTA AATTCAACCTGTGTTTTGGCATTCCGCTAGGTGTAATAGAATTTATAAAT TCTTGAGGGTAAAGGTCAACTTCTTCTTGGGTATCAGCAACAACAGAATC AAAGCTAGTGTAAGTATGAATATCCCCGGGCAGACGACCCAAAATTTGCT CATTGATTTCAAGGGCTTCTTCATTTGTTGGAGTCAGAATAACCCTTTTT GTAAAGTCACCCCCATCTTCAAAGTTACCAAAAACATGCTCAATTAAATC AGAATCAGTGGAAATTGCACACTGGTCAGGGATTTGAATACTACCAAGAT ATGGATCAGTTTGTTTTGTCGGCAGATTTCCCTCACCTAACTGCAGAAGA AAATTTGAAAATTCCATCTCACCTGGTCCTGCCCGCACATTTTGATGAAG GTGAAAAATTTGGACAAGGGGCCAAAGCTGGCTGCTTTTCAAACAGCTTT CTACCACCTGAGCAGCACTTCCCCTTTTAACGACAGGGAGTGTTTGTCTA AAATCACCACCAAGCAGAATTACCTTACCAGCAAATGGTATATGGCTGCT ACATATGTCTCTCAGCATAATATCCACAGCCTCTAGTGCATACTTTGGAA TCATGGAGCTTTCATCAAAGATGAAAATATCTTGATCTCTCAAAAAGGCT GCATGTGTACTGTTTGGTTTCACATTACATGTAGAACCATCATTGATGGG CACTGGCAACTTAAACAGACTGTGGCAAGTTTTTCCACCATCTAGAAGAG TTGCTGCAATTCCAGTCCAAGAAGAAGTGGCAACAGAGAATGATCGAGCC CTGGCTTCTTTTATAATGTAATTGTATGTGAAAGTTTTTCCTGTCCCCCC TGGCCCATCTAAGAAAAAAAGCTTGGTAGAGTTATGATCATTATTAGAAA GAGCTTCAAGAACTACATCTGCTACAATGGTTTGGTCATTATTTAACAAC GGCCTAATTTCAGCAGCTTCTTGTCTGTTTGCTTCTGCATCTGGCAGTTG CTCTACAAGTCCAAAATCTAAATGAGGTAGATTAAAATCATCCAAAGATT TGCCAAACTGCTTAAGCATAAGTTCAATGTGTGCCAATGCCATCTGTTCA GCTTGCAATTCAACATGTTGTCTCAAAAAGTCTTGCATCATAAATTCTTT GTAGTTCTCCCAAAGATCTGCTGGATTGTTAGGCTCACCATGAATTAGGA TAGTGCAAAAAGTCCTTCTGACTTTCAACGGAGACGCAACATGAACTACT TCATTTAAGGTGTCAACCCAGATATTATCATTAGCAAGTAGTCCCCTCGC CAAACATGCTTCTCTGAAAGTTGGATAAAGGACCCCATCAAAAGTTTTCA AAAATTCAAAAGATGTTGCTCCTGGCACATGCAATAACAGAACTCTCAAA AAATACCTTTCACCTTCACGAATGCTAGCATTATACATCCTACTTATGAC TGTGCCACGCTCTCTTGCTTTCCAACGGTTGTTATTAAAGACATAATCAT GAGGGATATCAGAATATAGAATTTGCCTAGAAGTGGGATCATTTTGATTT AACAAAAACCAGGCAGTTAGTTTAGTTTCCTTTTGCTCAGCTCTTTGAAC AGCGTTTCCTTCTTCACCTGGGCGAAAATATACTCTTTGGAAATTTGGTA GATGTACAGCTAACCTAACCACATTATGACTTTGAGTGTGCATATCAAAC TTAAACAAACGCCAACAACCTTCAGGAGCTGAAACATATCGTGCATCAAG GAAAGTCTTGATTTCATCATGATCAAGTCTCTCTGATATTTCAATATGAG CTGTGTCATGACCTTTGTAGATGTATTTATAAAGATATTGGACTGCTTTT ATTGAAACACAGGCTTCCAAATTGATGTGGGCATTATATTTTTTGCACAA ATAGGGAGAGTAGGGCACCACCCACCTATTGTCTAGATCAACATTTCTCA CTCGAACTGTGCGACCATTATCTGGTCTATGATAAAGTGGAAAACCATCC ACATTCATAACTGTGGCATCATTAAAAGACTTAGGATAGCCTTTTGAGCA GCTACCATCTTTCATGCAAGGACAGGTGTTGTTCAAAACACCACAGGGTC CATGAATCATATTAGCTTTTATAATTTCATAGAGCACCGGCTCTGTCTCT GGATCAGGAAGCTGCGCACAAATCAAGCGGTCAATATCGTCAGCATTTCT CAGTTTAAACTCAGCTTCAAAATGAATTAGAAGATGGGCATGAGGAAGCC CACGTTTCTGAAATTCAATCACATCAACACGGGCTACAACCATACCTAAA ATACCATCCTTCATTATTTCTTTCTTCATTGCAGCTAACTTCATTCGAAA GACACGCGTAAGTAAATCTGGCCTGTCATGGGCCCGTTGGTTTGGAAGTA AATTTTCAGTTATCTCTCTCCACTTAGGATTGCAGGTGAATGTCAGAAAA GTGTCTGGCTTTCCGTGCTTCGCAACAACAGCCATGGCATCTAGATACAA TTGGTGCATAGCCCGAGGGGATCCCGAAAATGAAGAAGGCAAAACAATGA CCTGACCTGCATTTAAATCCCTCTGTTGCGCAGCATTTTCAAGATGGTCT ACAAGGCCCTGATATGAATCTGCCCTTATTTCTTGTTGATGGAACCGATG GTAGTTTAGCCTATTACCTTCCACCTTAGTATATGCATCAACAATGAACT GTTGGAAAAGTTTCCCTGAAAGGTGAAGAGCAGAGAACCCTCTACGAATA GCTAACCTATATGCGTAATATTCAAGTTGTGTGACATGGTTCCTCTGTCT TGAAGCTCTTTCAGCTACATGGGGAAGGGTCCTATCCCAGCCTGGGTCAC CCCTTGGAAAGAGAAGTGGGTAAACTAAAGGATCCACAATACTGGATATG ATTGAAATGGTTCGGAGAGGTGCGTTTCGTGGATGCACAACAATACTCAT ATCACCTGGTGGAGCTCCATCGTCCCCCGAAAAAACAGCAGCAACCTCTT CATGCAAAGGAGCATTATATCTTCTCTGATCAGGACCCTCAAACATCTTC ATTCGGACAATTGGCAGCGGCCTATTTTCAGCTGCAGCTTGACGATGTTC TTCTTGCTCAACTTGACGCAAATGTTTGTAAGTGGCAGCATAAGGATTAA TATTATCAAGAATATCTTGAATGAGGGCCATAGTCTCACGATTGCACTCT GCTGCTGAAGGATTTTGCATTCTCAAGTTCAAAGCAGTAGCTGCCTCAAT TATATACAGTTGAGCAAATTGTGGTTGCTGTTGATCTGGAAAAACATTGC CAAGACGGTGGACAATTTGACCGCATATTCTGAAAGTTGGAGGTCCGTTA CCTGGAGGTGGTCTCAAATTAGCACAAAAGGAGGCAAAAGCAAAGGCATT GTTATAGATCCTAATATTTTTACGAAAAAGTTTTGATTGGTTTGAATTAT TGCTAAAGAGATGCTCAAGCTGAGGTGGAAAAGGATCTAATTGCGGAAGA GCGACTTTCCCTTTTTCACAACATCTAAATTCATCTTCATNGAATGCTGT AAGAATATTTTAGGATGATTTTCCCAAAAAAGTTAAGAATATCCATGATG AAATGGATTTACACCATTCTTATAAAAAAAAGCGTGTAGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021908TCONS_00021908Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021908-proteinTCONS_00021908-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000396supercontigsc0000396:190437..194528 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.46 0.27 0.27 0.15 0.46 0.56 0.66 0.96 0.47 0.38 0.56 0.34 0.57 0.51 0.76 0.72 1.27 0.97 0.86 0.75 0.97 0.9 0.42 0.63 0.09 0.19 0.59 0.58 0.36 0.34