XLOC_034186 (gene) - C. hemisphaerica

Overview
NameXLOC_034186
Unique NameXLOC_034186
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:268028..274972+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034186 ID=XLOC_034186|Name=XLOC_034186|organism=Clytia hemisphaerica|type=gene|length=6945bp|location=Sequence derived from alignment at scaffold_242:268028..274972+ (Clytia hemisphaerica)
ACCAAGGAATCTTAACCACAAAAGAGGACACCCGTCAATTTTTCGTTCAA TTATTTATAtatatttaatgttttttcttagaTGATATTGAATATGAAAG GAAAGCAATTATTTGTAAGCATCAAGTTCCAACGactaaaaaatttttaa aattatgaaaacatgAAGATGACCCAAGGTAAgtgttaaagtttttttat gattcaTACTTTGGAGTGTGGCTAGGGACAAACTACCCGCCGGGGGAGTC AGGCAGATTGAGcaacgggtatgtgcggcggtaaAGGGTACGTTTTTTCA AGATAGCAGAAACGcagcactgtaagggtggactttttgataaatgcaca TCAAGATTAGAAATTTCAACAAATCTAGGAAAAAGTGcaaaattttgccc aaaaattctGATTTTCTTTCGCTGAAAGAGTTTAGAATTTGAAACTCtat aaaagccatttttttcgccgcacatacggTGACACTTCCCCACTCTCCTT GGCAAACTAGCAATGTTTTTTAGAAATTGCCATAAATTATAATTTCGAAC TTTCGCTTTCCTGTGGCTTGATAAACGAGTCGGTGGTACGTCACAaatta tagcaaaaaaaaaaattcaaaaaggtaACAGTGCTCTTGTGGATGCAGAG AAAATTAATTATTATAGAGATTTTtctactgacctttatataccctggac aaagcttctcaatcccagccaagcaaaatctttgatcggagttttNcact gacctttatataacctggacaaagcttctcaatcccagccaagcaaaatc tttgattggagttttttgaaaattggtaccctaatgtcggcactactcga tagggGTGTAAATGCATctagagcgctaggtctacttttcctcaaattct tttgatgatgtagcggcgttagacgttaatttttaacattgcaatagctt ctccttgggtaccaattctaaaaaaactccaatcNGGGTGTAAATGCATc tagagcgctaggtctacttttccacaaattcttttgatgatgtagcggcg ttagacgttaatttttaacattgcaatagcttctccttgggtaccaattc taaaaaaactccaatcaaagatggcagatattgtttggtccagggttata taaaggtcagtggatttttcatgttttgttgaTGTTACCTAACATTCGCC ATTATGGAATGTGATTATTTGCGTGCCtttcgtgccctcgtgggttacGT GGgtctcgtgggtccaaaaaaaatttacgtgggtatctcgtggggaaaaa aaaaataatgtgggtatctcgtgggtccaaaaaattGCGCCAAGACTCTG TGTATAGACTCGACATAGACTCGTTTTTTTGGACCcccgtaatttttttt tgaacccacgagatacccacgtaattttttttttggacccacgagatacc cacgtaaatttttttttgacccacgagatacccacgAAGGCacacaaatc gaatgtttgcttccataatagcggaagttacgtaacttaacaaaacatga aGACTTCTATAAATTCAGTTACAACATTTATCCAAACCGAACTGTAATTT ATAGGGTTTTGACGAGGCTTAATATTCAAGTTAACAATGTGGAAATTAGT AAACTTTGAACAATAATAAACTGATCGTACTGAAAAAGTTGATAGATTTA ATGTTCCTTTAGCAGTCAGCCTGTTATATATTTTAGATTGTTAGACAAGC AACCCAGAGATATAAAACAAACATTAGATTAATGCATTGATATTCATACA TGTATACCATCCATAATTCATTGCGGTAGTCATCAAACTGTCACAGTATG TATTCACGTGTCAATATACTGTAACCTAGTTACAAtccttttttatcaaa tttttagaTGAATTGAAGGAATATATATTTTGGAAAGTGAaagaataata aaaagaaaaaaactattttatttcaagtttttattcGAACTGGTTTTTGT TTTTCCGACGGAAGAAACAATAATTTAATTGCGCTTGAATTAAGGCGAAT TAAGGCAACCCAGAACTTCCTCACGCAGTTAGTTTGAATCAAATTTTCTC AAtggcaattttttattttattgcttTTAGTTATcaatcattatttgtgt tttaGGAATAACAATCAGGAAATGAGAGGACAGAATTTTCCATTTGGAAT GAGTTAAATCGATTAAGTATACATTATCTATCGTGACTGTCTGTCAGTTG TTGTCTGGTGTAAGGGACTTCTCACTTCTCGAGAGAGGACATTTTCCTTC AAGAGAGGTTTTTTGAAACTTGCTTGCTTTACAACATTTCCGAAGGACCT TGTTACCATCTTGAATTCGCTCAATAATATATTCTTTACGGAGACTGATA ACCGCTCATTAAGTTACAAACAAGCTGGAATTGGTACCACAATTGACTGG AATTATCATACAAAGGCTTCAATTTAAATTAGTCCTGCTACCATTCTCGA CTTACTTCGTTGGGCTGAAGCTCTCATTATTTGTGTCACCAAAGCATTCT CAAGATGAGTACCAGCGCACGGAATATCGTGACCACGGACATGAAAACTA TTCGCGATTACCGTGAAGTACATGACACAGAAGAATTTAATGCATTTATT GAAATGAACGAAAAGAAAATGGCGGAACGAGAAGCGAATAATCGACGCGG TGATGCTGGATTTGAAAATGAACGTTCTACTAATAAAAAGATTGAGACCA AAAAAGAACAGAGAATCACAGAAGCTAAAGAGAAAGCTAAAGAACATAAA AAGAAACAGGAGAAAATTTTGGCACCGCCAACGCCCCCGCCCCAAGAGGA GGAAGAAGTAATTGAGGTATTGAATGGGTTttgtttctcaatttcttttt ttcatacCTGTAAAATTGTTGGGCttttctgattttcttgaatgttactt taaactttaaatttggTAAGCTCAAATCAGAGGTATAGCTTGTTACACTT GATTTTGAGTATGTAGGTAAGATTGTTGATTTGAATATGGATTGAACTCT TTTCTTTTAGGAAGTGAAACCAATGATTGATGAAGAAGAATGGAAAAGGA GGGTGATGGAAGGTAAGGAGGGAGGTTTTTCTAAGTCTAAAtttaggatg aatattaaaAGGAGCGGTGATTGGCTAATGCAAAAGAATCGGGCTCTTCC AGAAGATTTTTGTACATTGGCGTGGAGGATAAATTGGGTATTTTGTCcag gggggtagtgaaaaatctgcaaaatttgtttgttttaggggcaaacttgc tctgattaagggtgattttgaatgtccggaGGGTCAAATAATGCTTTTCC GGGGGGGGTGAGATccgttgtccgggggtcaaaattcacaatgtccgggt gtaaatttccaaaaaaaaattatatcctccacccccccccaccatattca attttttttctggaagagcccattcatACACATAAAAATTAGAACCTGAT TATTTTTAAGCAAAAGGGAGCACAGTTTTAAATGTTCAGGTTGAACAATC AGGTCGGTCCATCATATTCGCCGAATCCTTTAAGAAAAAGAATGTGGTGT GTGGTAGAATGGATGATATGTTATGAGATTAGAATTGTTTCCTTTTGGGT GTCCTGGTGTCCTACTGGGAAAGGGAAATTCCGTATTGCTGGATGCTCTG TGAGATAAAGATGGTgtaaccaatgaagtataagcccgaagggctagaat tgaatctccttggtaggatttgaagccaacaaaatcctaccaaagttgca cgGTCTGACATATTGAAATTATAATTTATtacttaatttaaaaaaaatat catataCTCGAAAACAAAGGTATTGCttgattcaatccgtcgtcaagaAT ACGgtgcatattttaaggcttcactttttcttgcttctagcccttcgggc ttatactccATTGGGTGTAACCTTGACACTGACAAATATCAAGGATAGTA ActacataaacttttttttctgaccatttgctttgatttttttccatcGA CAGATATTGTGGAGAGTTTCCATGCGATCGATTTGAACGGAGATGGCAAG ATTTCAGTGCACGAATTAATGTCTGCAATGAATGCTGCTGGTGAAGATGT TTCGGCTGAAGATattgaagatatttttgacGTCATCGACCTCGATGGTA AGGCTCCTTACTGTAGACTGTCTTACTGTACTCCTTATACTGTATTATCG ATTCTTTGACagataataccgagtttatgtatgtgtgtttttcaacgacg gagacggtaaggttctaatttgattagatcctgaccaactgaggacgacg gtaaatcagcacttctaccgtcctcgatttagcgggtcagaactgcgggt tatttattccaaatcgcttcagtcactctacagtcctcaaaagtgcaaat acataaactcgctaatttGATGAAGGTAGCGGGGAAAGGATGTGCTCTAA ATCTCATCAAAGTAAGGGTCTTTTTGGCCAAGATGTTTTAAACTATTTCT TCAAGAATTACCAGAGTCAATTTGGCTTTCGCACCAAACACgccttttca taaatcatttagagtgcaacgactgcctcgttttgaaactattatcaagg tgattaaatcccaataacgtttcttttataaatagagtaccttaaaggaa gaaattttggcggaaagaaaatttggcggatttggcggatttgactgaaa tccgccaaattaagttcccgccaaaatttctttttcccgccatccgccaa attaatttcccgccaaaatttctttttcccgccatccgccaaattaattt cccgccaaaatttctttttcccgccatccgccaaattaatttcccgccaa aatttctttttcccgccatccgccaaattaatttcccgccaaaatttctt tttcccgccatccgccaaattaatttcccgccaaaatttcttttttcctc catccgccaaattaaattccctctgaaaaaacttttttggccatccgcca aattaaattcccgccaaaatttcttcctttaaggtatactAACTCTTCTG GAAATCGAAAAACAAGATAAGCGTTGCTTATGGCGTAATTATGAGAGATC TGTCATATgaaccaaataaaaataatgttAGACTTCAATTACATTTCACA CTTATATTCACACGTATTTCAGGCGACGGTGAGATCAGTTTTGAGGAATT CAAGGATGCGATGTACGAAAAGATGTCACAACAAACAGTGGACGAAGACC TTATTGGTGCGTTCGAAATCTTCGATGACGATGGAGATGGCTATATCTCA CCAACAGAAATCCAATTGATGTTCAAGAAACTTGGTGAATTAATCTCCAC TGACGAAGCTGTGGAAATGATGAAAGACTGTGATATCAATAAAGATGGAC TTATCGATTTTGAAGgtacaaaagaatatttttgatttgttaTGATTGGT CGATGCAAATGAtgaatgacttttttgaaaataaaacacccctgtctcac agccccggtggattTTTTTGCCACCACAGTGAATCtcaatgggaatagaa attatattATTCCCAAGCTTAAGATATCCAGTGGGTATGGTTTTGGATAG CTTGGATAGATTTTTTAACATtggatttcgaatggggatgaaatcaaaat cagatttaaagtggggctgaaattgcagggtattttgtccaccggggacg aaagaAATCAAATCCCTGGTTTGACTACCTtaagtttttagaatttattc GAGATATGGAGttaggtttataaggcattgttaactatatggagaaggag acattcgagttatagaggctcGAGTTAAGCATTGGAGTAGtaaattgaaa tcaaaaataatagCGCTCAGCaatgcatacgtcataattattacttttat tttttttgacatttgtacgagttgcaatcccacaattcaatgcggctcaa ttaaagatacgtgcaagttgttatatatctttaGTCAAATGATTTAATTA ACTTGCAAAAGAGATTTTaaaacgcaaaggttgatgggattgtaactcgt acaaacacattgAGAGTAATGATTGTGTCAAAAGTCTATTTTCGTTTAGA ATTCAAAGCTTTCTATCTGAAGATTTTTGAGAACCAACCAACACTGGCTG AAATGATGATGCAAGAGCaagaaagaattgaaaaagaagaaatcgaTAAA GCTGAATGGGATAAATTGAACGCACAATTCCCTGCTTCAGGACATCCAGA ATCTTCCATATTTGATTACAAATAATGATGAAAAGGATACGAAAAGGATG TTTTCCCCCTGGGTATAGAATGTCTACTTCGATAATGATATTCACGTACC ATGATTCAGTACGTGTGAAACAGTTTTGATTGCCGTGAATCTCGCAAGCT GCTTGGAAGATAGAAAGAAGATAAGAAAAGatgaattacaaacaaaatgg acaaaattcaAATGACAAGATAAGCTTAATTTTAAATTGAAACATGTTTT ACCAGTCATTAAAACATTTATCAATACTGGTAGCAACTTTTTGAATGAAA CAACGAAGGACTGATCAACTCTTGTGTCATCAGCATTCAACGAACTGAAA AATTGACAAACCAGATGcaccaaaaaacaaaatatatatttttacaaaGA TATTGTGAGCCTACGACAAAAGATTTTTcgtttattctttttttattcta cAGAGGAAAGTtttacttaaattttggtatatatAACTTTAAAATCGGTT CACTCAAGGTTatgttaaaaaaactgaaattttgaccaaccaaaaatgaa aaaaaaaataaaaacagtaaTTTTAATGAAGAATCAACGAGAAATCTTTA ACCGTAAGCTCACGATATcttgacaaacctgtatactttttttgg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054197TCONS_00054197Clytia hemisphaericatranscript
TCONS_00054198TCONS_00054198Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054197-proteinTCONS_00054197-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:268028..274972 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.98 0.87 0.42 0.37 1.91 2.36 1.92 2.34 2.01 2.04 1.46 1.62 6.14 7.07 1.94 1.53 0.66 1.58 15.59 14.82 2.88 1.84 1.87 2.1 4.83 5.37 0.59 0.65 0.58 1.29