TCONS_00054197-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054197-protein
Unique NameTCONS_00054197-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length308

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054197-protein ID=TCONS_00054197-protein|Name=TCONS_00054197-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
MSTSARNIVTTDMKTIRDYREVHDTEEFNAFIEMNEKKMAEREANNRRGD
AGFENERSTNKKIETKKEQRITEAKEKAKEHKKKQEKILAPPTPPPQEEE
EVIEEVKPMIDEEEWKRRVMEDIVESFHAIDLNGDGKISVHELMSAMNAA
GEDVSAEDIEDIFDVIDLDGDGEISFEEFKDAMYEKMSQQTVDEDLIGAF
EIFDDDGDGYISPTEIQLMFKKLGELISTDEAVEMMKDCDINKDGLIDFE
EFKAFYLKIFENQPTLAEMMMQEQERIEKEEIDKAEWDKLNAQFPASGHP
ESSIFDYK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034186XLOC_034186Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054197TCONS_00054197Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availableGENE3D1.10.238.10coord: 94..136
e-value: 0.0012
score: 18.4
NoneNo IPR availableGENE3D1.10.238.10coord: 171..210
e-value: 2.9E-18
score: 64.9
coord: 244..292
e-value: 4.2E-5
score: 22.8
NoneNo IPR availableGENE3D1.10.238.10coord: 211..243
e-value: 1.1E-14
score: 53.6
coord: 137..170
e-value: 5.8E-18
score: 64.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..102
IPR002048EF-hand domainSMARTSM00054efh_1coord: 231..259
e-value: 1.4E-4
score: 31.2
coord: 122..150
e-value: 0.011
score: 25.0
coord: 195..223
e-value: 0.0086
score: 25.3
coord: 158..186
e-value: 5.4E-6
score: 35.9
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 121..183
e-value: 3.4E-14
score: 53.0
coord: 194..256
e-value: 1.6E-11
score: 44.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 191..226
score: 13.425
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 227..262
score: 12.533
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 118..153
score: 13.202
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 154..189
score: 16.076
IPR002048EF-hand domainCDDcd00051EFhcoord: 122..183
e-value: 2.17672E-14
score: 65.2617
IPR002048EF-hand domainCDDcd00051EFhcoord: 195..255
e-value: 1.45996E-11
score: 57.5577
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 240..252
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 167..179
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 131..143
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 204..216
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 120..260

Blast
[Close]
BLAST of TCONS_00054197-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.262e-24
Identity = 48/128 (37.50%), Postives = 81/128 (63.28%), Query Frame = 0 
Query:  125 ESFHAIDLNGDGKISVHELMSAMNAAGEDVSAEDIEDIFDVIDLDGDGEISFEEFKDAMYEKMSQQTVDEDLIGAFEIFDDDGDGYISPTEIQLMFKKLGELISTDEAVEMMKDCDINKDGLIDFEEF 252
            E+F   D +GDG I+  EL + M + G++ +  +++D+ + +D DG+G I F EF   M  KM     +E++  AF +FD DG+GYIS  E++ +   LGE ++ +E  EM+++ DI+ DG +++EEF
Sbjct:   15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
The following BLAST results are available for this feature:
BLAST of TCONS_00054197-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM32.262e-2437.50Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
back to top