XLOC_026595 (gene) - C. hemisphaerica

Overview
NameXLOC_026595
Unique NameXLOC_026595
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003684:8608..17284+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026595 ID=XLOC_026595|Name=XLOC_026595|organism=Clytia hemisphaerica|type=gene|length=8677bp|location=Sequence derived from alignment at sc0003684:8608..17284+ (Clytia hemisphaerica)
ACCAGGTGCTAACAtcttaatatctttttaaacaATCAAAGATAATACGC AACTAATCCCACAGTACTTCCCGGTCGTTTAATACgattatttcatctat gaataatcgaacaatatgcgaaattttcgactctggGTCGTCTTGTTTGT TGTTAATTCTATACAACCTCAAGTCGAAGATAGAGAAGACCTTTCGTCAT TATTAAGTTCTTTTAAGTTAATCAGTTTGTCAATGAAAATTAAGGCTTCG TGTGGTGTGATTTCCTCCGGGTCAATTTCTTGAACCTCATCTTCACTTTC CAGGTCAGATTTTGGGTTTTCTTCATTTCCAGATTCTTTATTCAAATACT CGCTAACACATTTACTCGCGGAGCTTACTCTCCAGTCAAATGAAATAACT GGCAATAGAACAGGGGAGGTGGCTATGGACTTGAAGTGCCAGTCATTTAC TATTTTACTGGCCCAGGAAAGCTTGTCAACTGGGTAAAGGAAAAACtgaa ttaaaagcaaaatttggaagaaaaaaaacaaaaaatgcttgaaataaATG GTTTAAAATCACTTATTACTTGTATCTTAATGTCGGAAACTATGTTTTCC tcggtgtccgctaattggagggggaaaaacaggtttttgaccATTCCGTG CAAAAATTTGTGTCCGCTAAATTGAGGTGTCTGCTAATTGAGTGTTcgcc ttttggaaacttttttataaggatttgacaaggaaacggccggggaaaaa tattttgtccgctaatcagaggtgtccgccttttagagtgtccgctaatt ggagattCTACTGTAGTTATTTTATACAAACTGATGTTATCCCTTTTCAA CTATCGTATTATCATGTAACACCCATTTACTGTATTCCacggattataaa cgactcctgTTTCGTCACGTTTTGTAAATTGATTTATTCtagttattcat gatatgcaccattgcaatgtcttccatagaccgaacagctgattggttga aagtgacgtattgactgattttacgtcacaaTCAGCTGTTAGGTCCATGA TGTAATTTCAGAAGACAATgcagtgttgcatatcatgaattaagtTGCTC TGCTAGATATTTAGAAACCATGTTTTCCTTACCGCAGGCGGGAAAAACAA GAAACAGCTGGCTGGTTTACGAGCAGAATGTGACCCTGACTTATACATGG AAGTTATCGAAGCTCTTCCCTTGGCGAATACTCCTGACGTTTTTGGTTTA CATCCAAATGCTGAAATTGGATACAGCACAACAGCTGCCAAAGGTTTGTT CCTTtcacacaatgttgtttcaatcttaataatttttttcccgcCGCTAT TAAAAAATGTGCAAAGGTGACAGATTTCTAAATATAGAATAGAGCCTGAG TAATCTTTGATAACAATAATTCGTCTCTCTCCAATCGAAATTTAAAGAAT TGAGTAAATGAAATCGTGAGGTGTTTGGTGGTTGAGAAATTGTTTCGAGC TTTACAATTGTTCAATAGCAACTTTGAGTAAGTAATGTCGAGTAAAAGAG TCAAAAAGTAGGTAATCATGGAAGTTCCGTGGTctgatacacattttttt tatataaacaaACTATATGAGAACACCAGGCCTCGATATTCAATATATTA AGAACATTTTAAGGCTTTACGCACTCTAAAACGCCAAATATCTTAGAAAA TTACAGAAAAATACGCCCAAAATGAATGGTGAAAACTTAAGAAGGGTTGA AATTAAGCTTGAAATTCAAAGTTAAAAAGTTAAGAACGTTGGAAGGCTTC AAAAAATTTGAATGCTCTTATAAAGAAATGTATATTCACTATCTACCCAT CCTTTTCTCTTTCCAGACATGTGGACACAACTCGTTGAATTACAACCGCA AACAGGTGGAGACAGTGGTGGTAAAAGTCGTGAAGAATTTATTGGTAAGA TTGCTGCAGACATCCAAGAGAAGTTACCAACACTTTATGACGTGAATGGT TTCAGAAagaaattaggattagagatatcaCCAACGACTGTGGTCTTATT ACAAGAGTTAGATGTGTTGATCAGGAAAATGGGCACCACCCTGATGAACC TACAAAGGGTAAGTGTTTTGTTTTAGATTGAAAAAGTCTATATTTTACGG CCATGTCGATATCTGTGGGTTGTTCTCTTAGGCCCCGTCACTTTAAACCT AACAAAACACTAAAGAATTGAAAATAAGCGTGGTTTgaactattcatgat atgcaccattgcgatgtcttctgacattacattacGGAGCCAcaaaagct gattggttgtgGGTGACTTAGAAttagtcaatacgtcacttgcaaccaat cagctgttgggtctgttgattgcaatggtgcatatcatgaataggggTAT GTGGGTTGTAGCGCTGACGCAAATNgcaatggtgcatatcatgaataggg gTATGTGGGTTGTAGCGCtgacgcaaattttttttccgtcagcggaCGTA GACTTGATTTAGCGGCCGTAGACCTGAATTAACGaccgaagacctgaatt aaacGGTCGAAGACCTGGATCAACGACTTTAGATAGGCATGAATACCATT TACTTTATTATCTTTATAATTGTAATGTTTGATCTAAAATATAAGAAGCA AATATAGTACATCCAATACCAggggcggtgcgacacccctgcaaaacatg cactcgcagggtatgctccggagtcatttttgtcgcagcttgtttttagc CTACCCGGAGTTGTTTTTCCGGATCATTCGTTAGtgtcattagatttatt ttactgacttaaagtccgcggtaaatataagaaaactgttTATCAAGTCG CGCTACAGGAAGCGTGAATTCCAGTCttcattttagattttgtgCACAAA ACGTTTTGCAGCCCCTGCcccctgcaaaattttgcagaaagacctggatg aggtcaaaatgcagggtttgcccgggatttgatggctgttagtgacaaaa cgttaaaagtcaagactcgtcaaatggctttagatgcttggagaagaaaa aacagaatagacagtcctggttttatctattttgtcgcaaattctgaANN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNATTGGGCATAAAAAggtggctgttttagccaatctagagggtcga aattcaaaaattttctggcccgtcgggcccaaccatggtgggccctcctt agacactatacatagctgaatcactatatatagctgaaccTTTTTTGCAG AGTATCCTAAAAATCCTAGATACGCCCCTGAATACCTAACTAAATATAAC TCTCTATCTCCCTCCCCCCTGAAAGTCCAAAACAAAAAGCTATATAGGGC ATGTACCCATAAAATATACACATTAATGTCCGTCTAAAGTGATGAAGAGA ACATGGTCTCAAGTCTATATACATTTATACATGTTTGCGTAGGGTTAGGG TATCGTAGTTCGCCCAATGAATGCCCAATATAAAGCAACATATCAACAGC TCTGAGAAATGTCGAGCAGGGTATCTTGATAGTTCGCCCTGTGATGACAT CATTATGTGTCATAGAGTCATGAAAGTATATAACCATGACGTTTGGGGAA AGATGAACAGGGTATCTTAATAGTTCGCCCTGTGATTAATAATATGTAAA TCGTACTATACAGTTCAAGTACTCATTTCAGCTCATAGTCGCTCAAGTGT CCAGGGACCTTTTTAATACGTTGAGATCTCCTGGGTTCTTGCGTTGAGCT TTGAGCTTTTTGACCAGAGCGTGGAGGAGCATTGTATGTTGTAACTCCTG ATGGTGAGCCATAAGATACGGACGGTGTTGATTGAGCAGGCTTTGTTGAT TGTTGGACGACTGGTGTAGTTGGTTGAAGATCTGACCGTTGGATACGTGG TGGTATAACTTCCTTCATTGGTGGTGCAGATGATGTTTGATGTTCGTCGT TCTTCACCGCCACAGGGGCAGCAGTTTTGTCCAGTCCCAAATGTGAGGGA TGATTGAGAGGGACTGGACGAGTTTGTGATGGAGATGGAATTATGGGATG AGTTGTGAACGGCTGTGGTATGAGAGGTGTAAAATGAGATGGGATTTGGA GGGAAGTGTCCTGGGGCATGACAGGGGTGAAGCGCCTCAGAAACTTCCTG TTGCGGAGAGTGACTCTCCCTGATCCATCCACTTTGACAGCGTATTGGTC GAACTGCCTCACTTCAATGATTGTGCCGGTCCTATCCCATTTGCGGGGGC TCTTGCCAACTTGATTCTGGATACGCACATGATCTCCAACCTTCAGTGGT GGTAGAGGACGGGTCCCGATGGCGAGGCGTTCAGCGATCTTGAGATGACG GTGTCGGAGGGCTTCTTCTCGCCTTTGGAGGGAGTCTTGCCAGGTTGGAT GCGGACGATACTTTCCAGGTAGGATAGGTACAGGCGATCGAGTAGGATGG CCAAAGATACATGTAGCAGGTGAGATGCGTGTGTCTGGCTGTGGTGTGTT TCTGTAGACGAGCATAGCTTTTTGGAAAGCGTCAGTGTCGAGGTTCCCAT TGGCATCTGTGTTGCCCACAATCATGCGCTTCACGGTCTTGACACCAATT TCAGCACGGCTGTTGCTGTGAGGGAAGGCTGTTGACGATATACGTTGTCT GACTCCCCACGATTTAAGGAAGGATTCTGTAGATCTTGAGGTGAATTCCG GGCCGCCATCAGATGCAAGCTCCTCAGGGATACCGTAGGTAACAAACGAG CGATGTAGGCTATCAATCAAACCGCTGCTTCCATCTCTTGCACGGTCTAC GATGGGCCAGTTTGAGTAGCGATCAACGGATACAAGATAGTATTTNCTTC GCTTGTGCCGGCTGATGAGATTGTTGGCCTCTTGACTCTCTCCACTTTAG CAGCACTCTGTTGATTGGGTGAGCCGGTGTGGGTAGCCGTGATGAGGGTT GCAACAATCGTGGCATCTAGGTCAGGGGTGACGTAATCACAAGATTCGAT TGGGCATACAGCAGGCATCTTTGTTGAGCAACCAAATGATATCAATTCAA AAGATCAAACATAGATAGGCATGAATACCATTTACTTTATTATCTTTATA ATTGTAATGTTTGATCTAAAATATAAGAAGCAAANCATTTACTTTATTAT CTTTATAATTGTAATGTTTGATCTAAAATATAAGAAGCAAAATCTTACAT CCAATACCTAACTAAATATAACTCTCTAGACTAGACGCCTTAAATTACTT GGCCATTGCTTACGGGCTTAAAGATATCTTTGTTTTAATGACTGTATTTT CGTTATAGTAGATTGCCCGAAATATCAAAGATTATATAACTATAAAGTTT TATCAATCTCATAATATTTTAGGCACTAGCCGGTGAAGTTGGTATggaca atgggcttttccagaaaaaaaccgtataccccctgttgaggaggtccatt tccgttccaagggggtaaggtttgatatgtgccGGAATTCCATAGAGATa caaaaaactgtcaaaaattactggaattccatgggggtagccttttaaat cctactaaaattcagaattccagagggagggtaaacctgaaattgcctgg aattccagagggttacagcatttccagccacaaaatgatggacctcctca acaggggtatacggtttttttctggaaaagcccaatgagcTAGACGATGT CGCTCGTGCTCTTTTCAACGGACAAATTCCACCGAGTTGGCGAAAACTTG CTCCTGCGACGCTCAAAAATTTGGGTGGTTGGATGGAACATTTTATGCGA AGAAATGAACAATATACTTCATGGGNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042796TCONS_00042796Clytia hemisphaericatranscript
TCONS_00042797TCONS_00042797Clytia hemisphaericatranscript
TCONS_00042798TCONS_00042798Clytia hemisphaericatranscript
TCONS_00042799TCONS_00042799Clytia hemisphaericatranscript
TCONS_00042800TCONS_00042800Clytia hemisphaericatranscript
TCONS_00042801TCONS_00042801Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00042797-proteinTCONS_00042797-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003684supercontigsc0003684:8608..17284 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.17 8.46 11.08 12.36 28.82 25.63 21.57 27.91 23.63 17.72 27.43 35.84 23.27 26.82 5.2 6.44 6.21 7.13 7.89 5.69 7.35 5.67 7.23 5.87 26.62 54.12 7 8.71 4.62 5.33