XLOC_026176 (gene) - C. hemisphaerica

Overview
NameXLOC_026176
Unique NameXLOC_026176
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003345:3486..7230-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026176 ID=XLOC_026176|Name=XLOC_026176|organism=Clytia hemisphaerica|type=gene|length=3745bp|location=Sequence derived from alignment at sc0003345:3486..7230- (Clytia hemisphaerica)
GTTTATACTGACTGAGGGCAAGAAATAAATGCTTTGTGTAGTGCTTTGTT
ATTCAATACACCATCACATTCTCCTAAAGGTCTATCAAGCATAAAAAACC
ACCCACCTTCTATTTTAGAGATCTTAAAATGAAAAAAACAACTTTAAATC
CCAATTAAATCAGGAGAAAATATCAAATACACAGTTTTGACTGCTCAAGA
AATTTATATTCAGTTATATTATGGATTCTGAAACTATTCAAGGTACAATC
TTTTTTTATTTTATTTTCAATACGAAAAATATTAATATATCACACAGAAT
AGAATTATATGTTATAAGGAACAAAACTGAACCAATACATGTGACTAATG
ACATAACAATTGACATACATAAACCTCTCAATTTTTTTACAGATTGAATT
GGTTGGAAACTTCGATTGAACATTTTGGTTTATGCCAGGGAGTCTTTTTT
CCATTTAAATAAATTTCAAATTATCGTTAGCGCTATTACTGTGCTCATCT
TGTATACTGTATTAAAAGAATATTATTAAGGTTTGATTCAATTATGGCGT
TAACTGTGACAAACAAATGAGAACATGACAAATACATATACCAAATAAAA
ACATAGACCAAATCTTATTTTTGTTTAAAAGAGACAATGTGACAGAAACA
GAACACCTTTCAATAATAAGAATTATGTTTGTACTTGTGTTGTTTCTTTT
TAAAAATTGATTTAGAAAATGGTGATTTTTGAAATTTCTGTTAATTTTTA
GTATCACAGCCCATCAACTCACATATATTTATGTTATTTTGTATTTATGT
TATATAATCTTCATTTTCATTCCAGCTCTTCAGAATGAAGCAATCAGCCA
ATCAATACTTCTCTCGAAATGCTTGGAGGCTGCCTCTTTGGATATGCTCT
ATCAAAAAATAATAAGTGACAGCATCACTGATCTCCAATCTCAGACCCCT
CCACTTATACTATGTGAAAGGAAATTGCTGACTTTATCTAGTCATGTTGG
GTGTACGGATGGTATTCTGTATGCAATGCCTTTGATAGCAGAAATTAATG
GTGAAAGACATTTATACATTAGGTAAAGAATTTGGCTTCTACTTTAAGTG
TTCGCTCTAGGAATTATTTCAATCTCTCTTTTCCCATGACACTTTGTATC
AACAACTGCTTAAAATCGAAATGTTTTATTTTTTAAACTTATTGATTTTA
TTTGTTTGCATTAAATTTCAGGTGTTTTGAGTCGGGTGTGTACAAAGGCT
ACTTTGATCAAACTGAAATGTTTGGTGAACTCATGGATCAGTATGAAATC
ACCAAGAAGTTTGTCATCAGGATATACACAGAGTGGGATGTTCTTGCTGT
TTATCACACTGAACGAAACAAACATAAAAAGGGTAAATAATTTTGAAATT
TAGTCTTTTTTACCAATAGTTGTATTTTTGTTATTACTGAACTGAATTTT
TGAAATTGTTGCCCAAACTATATTCTATTATATACTTTTTTATTCAGGGA
CTAAGCATTCAACAACATTTAAAAGGCTCACAACACTCGATAAACATTCA
ATCGATAAAACCATTAAATCAGCACACGACTCTTTAAAGGAAACATTTAA
AAGTTTTGCACCTGGTTTTGTATTTTATTGCCGTAGAGACATGTCTCATA
CAAATCGAAATACTGATCCCAAAGATAACCAGTAAGATAATACTTTTCTT
TGGTTCTCTACTGTCTTTTCTATTTGAAGAGAGTATTTTTAGAAACTAAG
ATTATGTACAAATTCGCCTCTGTGAAATATTCCACTTTTACATTACAGCT
GTTCTTCGAACTCGAACTCGGAAATCTAATTTGTTGAATTACAGAGAGTT
TTTTAAGAGACCTAGAAAATTCAATAGTATCAGGGATAGAAAGAATTAGG
GAAAGTCTAGTTCGCTAAAAGAAATTTTATTTTATTTCTTATTTTTCACA
GATTTTACTTGATTGAGGGTCTTGGTGCATCCGAACTCTGGTTTAGAAAC
TTTCAAGATTATGGAACCGAACATCCAAACGACCCATATCCAACCGTTCT
TGAACAGTTCAAAGGAAAAGAAGAACTTTCACTGATCGAGCAATTCCAAG
TTTTATCCCATGTCCCGAATCTTCATTCTTGGGCTTCTGAATCAAAAAGT
GGAACGAAAAAACAACAATATTTTGCTTCAAATGGTTACTCCCCTCGAGA
TATCATCTTACGTGCTCTAGATGACATTCATTCTGACATGGAAGAAAAAG
TCTCATCTATAACACCTATCTACTCGCTGATTTTATCCAAACAATACCAT
GTCCCGAAAGTGTCTATCCACAAACAAAATGTAAGTGTTAAACTTTTCAC
GTTATATGATTGATAAGATCCATTCATTTTCTAGTCTTCGGAAGACAAAT
CATAAAAATTTATATAATTACTACAAATAAGAAATGAAATTATGATGATT
TTTTCCGATAAATTATTAATCTCGATATCCTAAATATTTTAAATTTAGAA
ACGGCGTACTTGCAATCAAACTCACCGGCGAAAAGTATTGGACAAGACGG
CTTTGCTAGAGCATCTTGACCACCCTAATTTTGTTCAACCTGTATATGAA
AAGTTGGATGTTTACCCAAATTTTCGATACAATATTTTCAACNATGTACA
AATTCGCCTCTGTGAAATATTCCACTTTTACATTACAGCTGTTCTTCGAA
CTCGAACTCGGAAATCTAATTTGTTGAATTACAGACAGTTTTTTAAGAGA
CCTAGAAAATTCAATAGTATCAGGGATAGAAAGAATTAGTGAAATTCTAG
TTCGCTAAAAGAAATTTTATTTTATTTCTTATTTTTCACAGATTTTACTT
GATTGAGGGTCTTGGTGCATCTGAACTCTGGTTTAGAAACTTTCAAGATT
ATGGAACCGAACATCCAAACGACCCATATCCAACCGTTCTTGAACAGTTC
AAAGGAAAAGAAGAACTTTCACTGATCGAGCAATTCCAAGTTTTATCCCA
TGTCCCGAATCTTCATTCTTGGGCTTCTGAATCAAAAAGTGGAACGAAAA
AACAACAATATTTTGCTTCAAATGGTTACTCCCCTCGAGATATCATCTTA
CGTGCTCTAGATGACATTCATTCTGACATGGAAGAAAAAGTCTCATCTAT
AACACCTATCTACTCGCTGATTTTATCCAAACAATACCATGTCCCGAAAG
TGTCTATCCACAAACAAAATGTAAGTGTTAAACTTTTCACGTTATATGAT
TGATAAGATCCATTCATTTTCTAGTCTTCGGAAGACAAATCATAAAAATT
GATATAATTACTACAAATAAGAAATGAAATTATGATGATTTTTTCCGATA
AATCATTAATCTCGATATCCTAAATATTTTAAATTTAGAAACGGCGTACT
TGCAATCAAACTCACCGGCGAAAAGTATTGGACAAGACGGCTTTGCTAGA
GCATCTTGACCACCCTAATTTTGTTCAACCTGTGTATGAAAAGTTGGATG
TTTACCCAAATTTTCGATACAATATTTTCAATCACGGGACGATCGTTTGG
CGTGAACTATCACAAAACCAACATGTTGTGGTTATGAATGATTACGACTC
CGATAATATTAACGGGAACGTCAAGGTTGGTTTAAACCATTAAATGATAT
ACTTTGAAGGCTTAGATAATTTTTTTAGACGAAAAAAAAACCGATTCGTA
ATTTACAATAGTTGTAAGATGGAAAAAGAAGGTGTCTTAAAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042330TCONS_00042330Clytia hemisphaericatranscript
TCONS_00042329TCONS_00042329Clytia hemisphaericatranscript
TCONS_00042328TCONS_00042328Clytia hemisphaericatranscript
TCONS_00042327TCONS_00042327Clytia hemisphaericatranscript
TCONS_00042326TCONS_00042326Clytia hemisphaericatranscript
TCONS_00042325TCONS_00042325Clytia hemisphaericatranscript
TCONS_00042324TCONS_00042324Clytia hemisphaericatranscript
TCONS_00042323TCONS_00042323Clytia hemisphaericatranscript
TCONS_00042322TCONS_00042322Clytia hemisphaericatranscript
TCONS_00042321TCONS_00042321Clytia hemisphaericatranscript
TCONS_00042320TCONS_00042320Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00042323-proteinTCONS_00042323-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003345supercontigsc0003345:3486..7230 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.83	2.99	1.09	0.57	14.4	11.24	19.53	21.62	21.72	18.18	24.88	24.32	19.19	21.98	8.12	8.54	9.29	10.69	8.9	6.71	9.86	11.9	4.43	5.87	19.47	26.31	7.93	4.53	6.86	8.26