XLOC_025639 (gene) - C. hemisphaerica

Overview
NameXLOC_025639
Unique NameXLOC_025639
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002986:6207..11161+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025639 ID=XLOC_025639|Name=XLOC_025639|organism=Clytia hemisphaerica|type=gene|length=4955bp|location=Sequence derived from alignment at sc0002986:6207..11161+ (Clytia hemisphaerica)
GTTTCAGTTGTAAGACAAATCAATACTTGTTTTTGGTACTGAAGTTTTAA AATGTCTGATAACAATAGTGGCAAgaatgatttgaaaagaaagcgCATTG GTAAAAATGGACCTTACGAGAAATCGGTAAAAAGCTTATTTCAATTTTAA GTTAATCTTTTCTGATGGAGCGTGAAATTGTCTAgtaattttctgtaaaa acTTATTAATAATTGTCATTTTTCAGCTCGCTTACATTACAGATGGCAGA ATGCGTCGAGCTAAAGAGAAAGCCAAGCTTGGGCAGTTGGAAAAAGTTGT AAGTTTTTTGCTTTCAACAATTACAATTTTAATAGGATGTTATTCTTTTT GTTGAAGGAATAGTTAGGGTAATAGTGAAAAAGATTTTACACAAggaggt tttgattttttaggtTTATGAAATATCTCTGCTGACAAAGACACCAGTTG CTGTTATGGCCCTCAACTCCTACTCCCAGATTTGGATTGCAGGTAAAGAG CGATTTATTATGAACTTCTCTGCCTTTTATGTCTATTAGCATTAGCCATA CTTGCCTAtgaaatttactttcctaaTTAACTAAATCAGTAGGGTCAGAT GAGTTATTGATTCAAGCAGGACCtctgaaaatttagattttttaaacacG CCTATGATTTGATTACTCTACACGAGGAGGTCAGGACCAGATAGCAAACC TAGGGTTAGGCTATTAAAAAGTCACTTTGTTATTGATACCAAATTGAGGG GGTAGATCCCCCTTTTTGAAAGTAAAAGAAACTTTTAAGTTGATGAAAAT ACCAAAGTGATGAGGTGAACTCcctttttaaatgtttcttaatttGAAAA TGGTACCTGACTCGAAATTACTCAAATTTGTAATGTAATGTAGTGTAAAA TTTATTTGGTCAAAAAGGTCTATAATTTAGTCATTGCAACAAGCATTGAT GTGGACCTactataatttaaaaaaaataataagataataaaatataaata attatTTCGACTATTAACAAATAAATACATTCTTACAGTTAAATCGGCTA AAATAAATGACTATCAGAGATTATTGTAAAAGTAATTGAATTTAGAGAAT AAGGCTTGCaaagacaaaaagaaattgCTGGAAATTGTGTATTGAGTGTT ATAGTTTAgctgagcaaaaaaatggatAATAACGTGAGAAATTAATAgaa cataaatattaaaatacATATATTAAAAGGCTTTTGCTAGGAAATAGGTT GattaaaattaagaaaatataggtaAATGGGATTCTGGCTTAAATTCTAG TTACTTGGGTTATATATTATTCATTTGTATATTTTATAACTGAGAATATT TgaattcttgaaaaactttaGGGCGAAATTGAtagattcaaaatattttg ttattatttgagaattttaaagtaatacaaaaaacttttcagtaaaataa aaaCCTTTATTACTTGTTTTAGTAATTTATTTTTGGGGGTGTAGGGGTAT TTGTCATTTTGCTGGAAGTATTCATGTTTGTTTTAGTACCAATTTAGTGG ATGGTCCCCCCTTTTTCCTTAAACTGAGGTTAATAAGTTGGTGTTgataa caattttttatattatttttaccAGGTACGACTGACAAAATGACTGAGTT TGTGAGTAACGAGGAACTCCAAAGCAAGTTTGAAATGGCGGCGAAAGGTG ATTCTGAACCGTACTATAATTTTCaaagtaagtgaaaaaatttccaacca tCAACTAATATTGCtttgcatttttcgattttcaaatcTATTTTCCTTGG GGCTATGTTCTTCTTCTTGACAATCTCCGGGCTCCTGCGGTTTCTTGTGA TTTACCTCGAAATTACCCGGTACTATTTTTAAGTAAACTGCAGAGATCTA CAGGAAATATACTTTTCTGTGCCTATGTGCACAATTTACAACCCCTCCTC TATCAATTAAGGTAAAATGAGTACTATTTTATGTCTGTCCATGTATTTAT CATTTTGCCATCCCAAATAGAGAAAAGACCGACACAGAATATTGTGGCAA ATGAACAAGTAGACAGTGAGCAAGAAGAATTCGATTTTCCCGTTGACTGG GCCAAGTTCAACACTCTTAAAAAAAGAGTGCTAGTGAGAAATCTAGTTCG ATGGTACACTGGTAAATCATTtcttaagttttatttttcatataaaaaat tgATCTTTCTCTTATATCGCTGTATCATTTCAGAAGACATGACCTATTTC GATAGGATTTTGTCTAAATCATAATCAAAAGTATCACTATCACTATCACT TCACTTGAATATCTCTGCGGAATAACTCCTTCATTGATTTTAACCTTTGA TGGTATGTTTGATTATTTGTATCATAAATACTACTAAGAAACCGTTTAAT AAGAATCGTGAATGAAACTTGATGTGTTTGTTTCATCCTGCACCGGTGTT TTAAATTTGAGGTGATAATCATTTGACCTTTATAACTCAAtgaaattgtg aattttgatttccttttttaaaaaatttcagagaCGTGGAAACCGTGGAT CCCTTCACTCAAACCAGAATGGTGGCCGGATGACATATCATTTCGGTCTA CCCGAAAGTCTGATGTGTCATCTTTAGATAAGATATTAAATTCTTTTCTG AAGTTTCGCGCTACAAGCAGTATGGTTAGTTTAGTCTTCGACTTATCTTA GAGCTCTAGTTGTTGGTTCCTGTTGCCGATAAAGTGTTACTTACGCATAA AAGTCATTTTGGGTAGTAGATGATAGGGGAGAAAGATAAGATATTAACAT AACTAAAAATAGAGCAGTTTTAATATGTCAGAGGAGATCGGACTCAATGA GCCGATGTGATGAACCCTCAGCGgtcatagaggtcgtcgttaaGTTTCTT AAACGTCGTCGCCATGCTTAGAGACCGTGGTTGAACAAAGAATTTGTCAT CGAACATAGAGACCGTGGTCGGACGatgtctaaaaaaattaaacgaTGAC CTCCACGACCGATGAAAGCTTATTATCTCGGCTTATTGAACCCGATCACC TGATATTAATGTGGTCTGGTTTCATTTTGATCCATAATGACGCCAATAAA AATTTGCACATCtaattcaaataagtttttttcgGTCCAATTTCAGATTT ACAACGGGTTAACCAGCTTTCAACCTTTTTTCCAAACTCGAGAAATTGCA TATTATTGGTTTTGATTATGGCACCGGGTCTAAACCGTTTTTGAAAAAGC AATGTAGAGGTGAAAAACTTTGACTCCCGCGTAAAGCGAAAAGTTTGTCC CACGCGGAAAATAGACTCAATGGAAAACCTACTTTAGATTgagaatttta atattttaaggTGCGGCGTTTTAGAAACTTTGATATTTTACTTGGCGATA GTGTGAcagataaaaattgaaattcattcAGTATAGTAAGGTCTGTCTTC TATTTATGAATGATCACGGGACGAATAActtctttttctcatatttttaa ggctttgtttcAAGCATCGGATCTCCCTGTTTCCTCCGAACAGTGGGCTG AGCTGAATTGGGAAGACTTTGATTTCCCGAAAAACTGGCTTGCAAAGAAT TGGTCACCGCCAAAAACTCCAATTAAAAAGAATCTAGTATCTCTAAGGTA AGAACAGTTTTCAGAgttgatattttacgtggatagcacggtaatctagg acttttaggccATCGATCGCTCCGTGCTGTAAATGATACTCGATATTTTT GCTTGCGTTTCCTGATCAGGTAGATATTCAATGGCTATTGCTTCTACACT TATGCTAGAGGGTTTCAAGAACAAAATCACCGAAACGAAAATGTATTGTT CATGAAaactttgttcaattttttaatggttttatattttaaattattat ttACTATTTAAGTAAATATTCGATGTCATGTTGGTTTTAACTAGTACTAT GTAACTATTTTTGTGATACCAACTCTAaagaaagaataaataaaaataaa ataaaaattgataccACCGTCGAAAAGAACTAAAGCTCAAAAGCTAACCG CGCCAACTAGGGATTGATACGTGTATTGGAGTGTCCAAACATTTTCCCTT GTAAATCTAGCACGACAGGCGCTAATTTTTCAAGTAAGAACACGAAATTA GCTTTTGATACGAGTATACATTTTAGGTTTATTAGCTGTGTTttataacg cattaaattaaattgtttCCGTTTAGGCACCGTTGTTTAGTAGCCGATAC AGATCTGGAGCCTGTTCGACTTCTTACATCAGCAGAATGCATTTCGTTTG CATTATTTCATGATAAGAAATTTTGGCCTTTCATAAAGCTGGTTACCATA ACGAGTTGCTTGTCACATATTGACGTTCTGGTCGAATGGGTTAGTTAAGt ctaataattatttttcaaaaatgagaaTTAAGTGCTATCCCTGCTTCGGA GATAAcaatattttctgtttttctcttttaaatttcataaaaagcaTAAA AGAACATTACTTTTAGTTTCGTGCTTAGTTTCGTGCGTCAGGCATTCATC CGATGtacaaagtttagaaaaaatgttaaaaaaacttTGTACTGGTTATG ACAGACTACTAATTTTCTACTTTTATCAATAGATGACAAATGGTATCGGT AATATCAATCAGGAAGTGATACGAAACCTATTTGGCTCTTCAAATTTGAC AGAGCTGAAATCTAATATACTAGAGAGGACACAAGATTCAAGTAAAAATA TTTGCACAActtttttttctgtgttttttttttccatgaCTTTTCGAGCT CATTTTTCGCCTTCTTCTAACGAAGTGAGCAACGGCTTCATTTAGTTTTG TAGTGAAATGGAACCAATTTCTTAACATGGTCTGTGagaccatagtataa gaaagccgtggctggaatgataacatctgaatttctgttgttttctatct ctgtc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041719TCONS_00041719Clytia hemisphaericatranscript
TCONS_00041720TCONS_00041720Clytia hemisphaericatranscript
TCONS_00041721TCONS_00041721Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041721-proteinTCONS_00041721-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002986supercontigsc0002986:6207..11161 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14 0.54 0.04 0.04 3.29 2.25 3.1 3.16 3.19 5.06 5.88 3.89 3.57 2.69 3.01 4.07 2.3 4.29 4.84 2.81 4.21 4.29 1.74 2.18 1.8 1.57 6.65 3.54 2.19 2.23