TCONS_00041721 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041721
Unique NameTCONS_00041721
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1295

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041721 ID=TCONS_00041721|Name=TCONS_00041721|organism=Clytia hemisphaerica|type=transcript|length=1295bp
GTTTCAGTTGTAAGACAAATCAATACTTGTTTTTGGTACTGAAGTTTTAA
AATGTCTGATAACAATAGTGGCAAgaatgatttgaaaagaaagcgCATTG
GTAAAAATGGACCTTACGAGAAATCGCTCGCTTACATTACAGATGGCAGA
ATGCGTCGAGCTAAAGAGAAAGCCAAGCTTGGGCAGTTGGAAAAAGTTgt
TTATGAAATATCTCTGCTGACAAAGACACCAGTTGCTGTTATGGCCCTCA
ACTCCTACTCCCAGATTTGGATTGCAGGTACGACTGACAAAATGACTGAG
TTTGTGAGTAACGAGGAACTCCAAAGCAAGTTTGAAATGGCGGCGAAAGG
TGATTCTGAACCGTACTATAATTTTCaaaAGAAAAGACCGACACAGAATA
TTGTGGCAAATGAACAAGTAGACAGTGAGCAAGAAGAATTCGATTTTCCC
GTTGACTGGGCCAAGTTCAACACTCTTAAAAAAAGAGTGCTAGTGAGAAA
TCTAGTTCGATGGTACACTGagaCGTGGAAACCGTGGATCCCTTCACTCA
AACCAGAATGGTGGCCGGATGACATATCATTTCGGTCTACCCGAAAGTCT
GATGTGTCATCTTTAGATAAGATATTAAATTCTTTTCTGAAGTTTCGCGC
TACAAGCAGTATGgctttgtttcAAGCATCGGATCTCCCTGTTTCCTCCG
AACAGTGGGCTGAGCTGAATTGGGAAGACTTTGATTTCCCGAAAAACTGG
CTTGCAAAGAATTGGTCACCGCCAAAAACTCCAATTAAAAAGAATCTAGT
ATCTCTAAGGCACCGTTGTTTAGTAGCCGATACAGATCTGGAGCCTGTTC
GACTTCTTACATCAGCAGAATGCATTTCGTTTGCATTATTTCATGATAAG
AAATTTTGGCCTTTCATAAAGCTGGTTACCATAACGAGTTGCTTGTCACA
TATTGACGTTCTGGTCGAATGGATGACAAATGGTATCGGTAATATCAATC
AGGAAGTGATACGAAACCTATTTGGCTCTTCAAATTTGACAGAGCTGAAA
TCTAATATACTAGAGAGGACACAAGATTCAAGTAAAAATATTTGCACAAc
ttttttttctgtgttttttttttccatgaCTTTTCGAGCTCATTTTTCGC
CTTCTTCTAACGAAGTGAGCAACGGCTTCATTTAGTTTTGTAGTGAAATG
GAACCAATTTCTTAACATGGTCTGTGagaccatagtataagaaagccgtg
gctggaatgataacatctgaatttctgttgttttctatctctgtc
Run BLAST on NCBI

protein sequence of TCONS_00041721-protein

>TCONS_00041721-protein ID=TCONS_00041721-protein|Name=TCONS_00041721-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
MSDNNSGKNDLKRKRIGKNGPYEKSLAYITDGRMRRAKEKAKLGQLEKVV
YEISLLTKTPVAVMALNSYSQIWIAGTTDKMTEFVSNEELQSKFEMAAKG
DSEPYYNFQKKRPTQNIVANEQVDSEQEEFDFPVDWAKFNTLKKRVLVRN
LVRWYTETWKPWIPSLKPEWWPDDISFRSTRKSDVSSLDKILNSFLKFRA
TSSMALFQASDLPVSSEQWAELNWEDFDFPKNWLAKNWSPPKTPIKKNLV
SLRHRCLVADTDLEPVRLLTSAECISFALFHDKKFWPFIKLVTITSCLSH
IDVLVEWMTNGIGNINQEVIRNLFGSSNLTELKSNILERTQDSSKNICTT
FFSVFFFSMTFRAHFSPSSNEVSNGFI
Run BLAST on NCBI

transcript from alignment at sc0002986:6207..11161+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041721 ID=TCONS_00041721|Name=TCONS_00041721|organism=Clytia hemisphaerica|type=transcript|length=4955bp|location=Sequence derived from alignment at sc0002986:6207..11161+ (Clytia hemisphaerica)
GTTTCAGTTGTAAGACAAATCAATACTTGTTTTTGGTACTGAAGTTTTAA
AATGTCTGATAACAATAGTGGCAAgaatgatttgaaaagaaagcgCATTG
GTAAAAATGGACCTTACGAGAAATCGGTAAAAAGCTTATTTCAATTTTAA
GTTAATCTTTTCTGATGGAGCGTGAAATTGTCTAgtaattttctgtaaaa
acTTATTAATAATTGTCATTTTTCAGCTCGCTTACATTACAGATGGCAGA
ATGCGTCGAGCTAAAGAGAAAGCCAAGCTTGGGCAGTTGGAAAAAGTTGT
AAGTTTTTTGCTTTCAACAATTACAATTTTAATAGGATGTTATTCTTTTT
GTTGAAGGAATAGTTAGGGTAATAGTGAAAAAGATTTTACACAAggaggt
tttgattttttaggtTTATGAAATATCTCTGCTGACAAAGACACCAGTTG
CTGTTATGGCCCTCAACTCCTACTCCCAGATTTGGATTGCAGGTAAAGAG
CGATTTATTATGAACTTCTCTGCCTTTTATGTCTATTAGCATTAGCCATA
CTTGCCTAtgaaatttactttcctaaTTAACTAAATCAGTAGGGTCAGAT
GAGTTATTGATTCAAGCAGGACCtctgaaaatttagattttttaaacacG
CCTATGATTTGATTACTCTACACGAGGAGGTCAGGACCAGATAGCAAACC
TAGGGTTAGGCTATTAAAAAGTCACTTTGTTATTGATACCAAATTGAGGG
GGTAGATCCCCCTTTTTGAAAGTAAAAGAAACTTTTAAGTTGATGAAAAT
ACCAAAGTGATGAGGTGAACTCcctttttaaatgtttcttaatttGAAAA
TGGTACCTGACTCGAAATTACTCAAATTTGTAATGTAATGTAGTGTAAAA
TTTATTTGGTCAAAAAGGTCTATAATTTAGTCATTGCAACAAGCATTGAT
GTGGACCTactataatttaaaaaaaataataagataataaaatataaata
attatTTCGACTATTAACAAATAAATACATTCTTACAGTTAAATCGGCTA
AAATAAATGACTATCAGAGATTATTGTAAAAGTAATTGAATTTAGAGAAT
AAGGCTTGCaaagacaaaaagaaattgCTGGAAATTGTGTATTGAGTGTT
ATAGTTTAgctgagcaaaaaaatggatAATAACGTGAGAAATTAATAgaa
cataaatattaaaatacATATATTAAAAGGCTTTTGCTAGGAAATAGGTT
GattaaaattaagaaaatataggtaAATGGGATTCTGGCTTAAATTCTAG
TTACTTGGGTTATATATTATTCATTTGTATATTTTATAACTGAGAATATT
TgaattcttgaaaaactttaGGGCGAAATTGAtagattcaaaatattttg
ttattatttgagaattttaaagtaatacaaaaaacttttcagtaaaataa
aaaCCTTTATTACTTGTTTTAGTAATTTATTTTTGGGGGTGTAGGGGTAT
TTGTCATTTTGCTGGAAGTATTCATGTTTGTTTTAGTACCAATTTAGTGG
ATGGTCCCCCCTTTTTCCTTAAACTGAGGTTAATAAGTTGGTGTTgataa
caattttttatattatttttaccAGGTACGACTGACAAAATGACTGAGTT
TGTGAGTAACGAGGAACTCCAAAGCAAGTTTGAAATGGCGGCGAAAGGTG
ATTCTGAACCGTACTATAATTTTCaaagtaagtgaaaaaatttccaacca
tCAACTAATATTGCtttgcatttttcgattttcaaatcTATTTTCCTTGG
GGCTATGTTCTTCTTCTTGACAATCTCCGGGCTCCTGCGGTTTCTTGTGA
TTTACCTCGAAATTACCCGGTACTATTTTTAAGTAAACTGCAGAGATCTA
CAGGAAATATACTTTTCTGTGCCTATGTGCACAATTTACAACCCCTCCTC
TATCAATTAAGGTAAAATGAGTACTATTTTATGTCTGTCCATGTATTTAT
CATTTTGCCATCCCAAATAGAGAAAAGACCGACACAGAATATTGTGGCAA
ATGAACAAGTAGACAGTGAGCAAGAAGAATTCGATTTTCCCGTTGACTGG
GCCAAGTTCAACACTCTTAAAAAAAGAGTGCTAGTGAGAAATCTAGTTCG
ATGGTACACTGGTAAATCATTtcttaagttttatttttcatataaaaaat
tgATCTTTCTCTTATATCGCTGTATCATTTCAGAAGACATGACCTATTTC
GATAGGATTTTGTCTAAATCATAATCAAAAGTATCACTATCACTATCACT
TCACTTGAATATCTCTGCGGAATAACTCCTTCATTGATTTTAACCTTTGA
TGGTATGTTTGATTATTTGTATCATAAATACTACTAAGAAACCGTTTAAT
AAGAATCGTGAATGAAACTTGATGTGTTTGTTTCATCCTGCACCGGTGTT
TTAAATTTGAGGTGATAATCATTTGACCTTTATAACTCAAtgaaattgtg
aattttgatttccttttttaaaaaatttcagagaCGTGGAAACCGTGGAT
CCCTTCACTCAAACCAGAATGGTGGCCGGATGACATATCATTTCGGTCTA
CCCGAAAGTCTGATGTGTCATCTTTAGATAAGATATTAAATTCTTTTCTG
AAGTTTCGCGCTACAAGCAGTATGGTTAGTTTAGTCTTCGACTTATCTTA
GAGCTCTAGTTGTTGGTTCCTGTTGCCGATAAAGTGTTACTTACGCATAA
AAGTCATTTTGGGTAGTAGATGATAGGGGAGAAAGATAAGATATTAACAT
AACTAAAAATAGAGCAGTTTTAATATGTCAGAGGAGATCGGACTCAATGA
GCCGATGTGATGAACCCTCAGCGgtcatagaggtcgtcgttaaGTTTCTT
AAACGTCGTCGCCATGCTTAGAGACCGTGGTTGAACAAAGAATTTGTCAT
CGAACATAGAGACCGTGGTCGGACGatgtctaaaaaaattaaacgaTGAC
CTCCACGACCGATGAAAGCTTATTATCTCGGCTTATTGAACCCGATCACC
TGATATTAATGTGGTCTGGTTTCATTTTGATCCATAATGACGCCAATAAA
AATTTGCACATCtaattcaaataagtttttttcgGTCCAATTTCAGATTT
ACAACGGGTTAACCAGCTTTCAACCTTTTTTCCAAACTCGAGAAATTGCA
TATTATTGGTTTTGATTATGGCACCGGGTCTAAACCGTTTTTGAAAAAGC
AATGTAGAGGTGAAAAACTTTGACTCCCGCGTAAAGCGAAAAGTTTGTCC
CACGCGGAAAATAGACTCAATGGAAAACCTACTTTAGATTgagaatttta
atattttaaggTGCGGCGTTTTAGAAACTTTGATATTTTACTTGGCGATA
GTGTGAcagataaaaattgaaattcattcAGTATAGTAAGGTCTGTCTTC
TATTTATGAATGATCACGGGACGAATAActtctttttctcatatttttaa
ggctttgtttcAAGCATCGGATCTCCCTGTTTCCTCCGAACAGTGGGCTG
AGCTGAATTGGGAAGACTTTGATTTCCCGAAAAACTGGCTTGCAAAGAAT
TGGTCACCGCCAAAAACTCCAATTAAAAAGAATCTAGTATCTCTAAGGTA
AGAACAGTTTTCAGAgttgatattttacgtggatagcacggtaatctagg
acttttaggccATCGATCGCTCCGTGCTGTAAATGATACTCGATATTTTT
GCTTGCGTTTCCTGATCAGGTAGATATTCAATGGCTATTGCTTCTACACT
TATGCTAGAGGGTTTCAAGAACAAAATCACCGAAACGAAAATGTATTGTT
CATGAAaactttgttcaattttttaatggttttatattttaaattattat
ttACTATTTAAGTAAATATTCGATGTCATGTTGGTTTTAACTAGTACTAT
GTAACTATTTTTGTGATACCAACTCTAaagaaagaataaataaaaataaa
ataaaaattgataccACCGTCGAAAAGAACTAAAGCTCAAAAGCTAACCG
CGCCAACTAGGGATTGATACGTGTATTGGAGTGTCCAAACATTTTCCCTT
GTAAATCTAGCACGACAGGCGCTAATTTTTCAAGTAAGAACACGAAATTA
GCTTTTGATACGAGTATACATTTTAGGTTTATTAGCTGTGTTttataacg
cattaaattaaattgtttCCGTTTAGGCACCGTTGTTTAGTAGCCGATAC
AGATCTGGAGCCTGTTCGACTTCTTACATCAGCAGAATGCATTTCGTTTG
CATTATTTCATGATAAGAAATTTTGGCCTTTCATAAAGCTGGTTACCATA
ACGAGTTGCTTGTCACATATTGACGTTCTGGTCGAATGGGTTAGTTAAGt
ctaataattatttttcaaaaatgagaaTTAAGTGCTATCCCTGCTTCGGA
GATAAcaatattttctgtttttctcttttaaatttcataaaaagcaTAAA
AGAACATTACTTTTAGTTTCGTGCTTAGTTTCGTGCGTCAGGCATTCATC
CGATGtacaaagtttagaaaaaatgttaaaaaaacttTGTACTGGTTATG
ACAGACTACTAATTTTCTACTTTTATCAATAGATGACAAATGGTATCGGT
AATATCAATCAGGAAGTGATACGAAACCTATTTGGCTCTTCAAATTTGAC
AGAGCTGAAATCTAATATACTAGAGAGGACACAAGATTCAAGTAAAAATA
TTTGCACAActtttttttctgtgttttttttttccatgaCTTTTCGAGCT
CATTTTTCGCCTTCTTCTAACGAAGTGAGCAACGGCTTCATTTAGTTTTG
TAGTGAAATGGAACCAATTTCTTAACATGGTCTGTGagaccatagtataa
gaaagccgtggctggaatgataacatctgaatttctgttgttttctatct
ctgtc

Coding sequence (CDS) from alignment at sc0002986:6207..11161+

>TCONS_00041721 ID=TCONS_00041721|Name=TCONS_00041721|organism=Clytia hemisphaerica|type=CDS|length=10206bp|location=Sequence derived from alignment at sc0002986:6207..11161+ (Clytia hemisphaerica)
ATGTCTGATAACAATAGTGGCAAgaatgatttgaaaagaaagcgCATTGG
TAAAAATGGACCTTACGAGAAATCGCTCGCTTACATTACAGATGGCAGAA
TGCGTCGAGCTAAAGAGAAAGCCAAGCTTGGGCAGTTGGAAAAAGTTgtT
TATGAAATATCTCTGCTGACAAAGACACCAGTTGCTGTTATGGCCCTCAA
CTCCTACTCCCAGATTTGGATTGCAGGTACGACTGACAAAATGACTGAGT
TTGTGAGTAACGAGGAACTCCAAAGCAAGTTTGAAATGGCGGCGAAAGGT
GATTCTGAACCGTACTATAATTTTCaaaAGAAAAGACCGACACAGAATAT
TGTGGCAAATGAACAAGTAGACAGTGAGCAAGAAGAATTCGATTTTCCCG
TTGACTGGGCCAAGTTCAACACTCTTAAAAAAAGAGTGCTAGTGAGAAAT
CTAGTTCGATGGTACACTGagaCGTGGAAACCGTGGATCCCTTCACTCAA
ACCAGAATGGTGGCCGGATGACATATCATTTCGGTCTACCCGAAAGTCTG
ATGTGTCATCTTTAGATAAGATATTAAATTCTTTTCTGAAGTTTCGCGCT
ACAAGCAGTATGgctttgtttcAAGCATCGGATCTCCCTGTTTCCTCCGA
ACAGTGGGCTGAGCTGAATTGGGAAGACTTTGATTTCCCGAAAAACTGGC
TTGCAAAGAATTGGTCACCGCCAAAAACTCCAATTAAAAAGAATCTAGTA
TCTCTAAGGCACCGTTGTTTAGTAGCCGATACAGATCTGGAGCCTGTTCG
ACTTCTTACATCAGCAGAATGCATTTCGTTTGCATTATTTCATGATAAGA
AATTTTGGCCTTTCATAAAGCTGGTTACCATAACGAGTTGCTTGTCACAT
ATTGACGTTCTGGTCGAATGGATGACAAATGGTATCGGTAATATCAATCA
GGAAGTGATACGAAACCTATTTGGCTCTTCAAATTTGACAGAGCTGAAAT
CTAATATACTAGAGAGGACACAAGATTCAAGTAAAAATATTTGCACAAct
tttttttctgtgttttttttttccatgaCTTTTCGAGCTCATTTTTCGCC
TTCTTCTAACGAAGTGAGCAACGGCTTCATTTAGATGTCTGATAACAATA
GTGGCAAgaatgatttgaaaagaaagcgCATTGGTAAAAATGGACCTTAC
GAGAAATCGCTCGCTTACATTACAGATGGCAGAATGCGTCGAGCTAAAGA
GAAAGCCAAGCTTGGGCAGTTGGAAAAAGTTgtTTATGAAATATCTCTGC
TGACAAAGACACCAGTTGCTGTTATGGCCCTCAACTCCTACTCCCAGATT
TGGATTGCAGGTACGACTGACAAAATGACTGAGTTTGTGAGTAACGAGGA
ACTCCAAAGCAAGTTTGAAATGGCGGCGAAAGGTGATTCTGAACCGTACT
ATAATTTTCaaaAGAAAAGACCGACACAGAATATTGTGGCAAATGAACAA
GTAGACAGTGAGCAAGAAGAATTCGATTTTCCCGTTGACTGGGCCAAGTT
CAACACTCTTAAAAAAAGAGTGCTAGTGAGAAATCTAGTTCGATGGTACA
CTGagaCGTGGAAACCGTGGATCCCTTCACTCAAACCAGAATGGTGGCCG
GATGACATATCATTTCGGTCTACCCGAAAGTCTGATGTGTCATCTTTAGA
TAAGATATTAAATTCTTTTCTGAAGTTTCGCGCTACAAGCAGTATGgctt
tgtttcAAGCATCGGATCTCCCTGTTTCCTCCGAACAGTGGGCTGAGCTG
AATTGGGAAGACTTTGATTTCCCGAAAAACTGGCTTGCAAAGAATTGGTC
ACCGCCAAAAACTCCAATTAAAAAGAATCTAGTATCTCTAAGGCACCGTT
GTTTAGTAGCCGATACAGATCTGGAGCCTGTTCGACTTCTTACATCAGCA
GAATGCATTTCGTTTGCATTATTTCATGATAAGAAATTTTGGCCTTTCAT
AAAGCTGGTTACCATAACGAGTTGCTTGTCACATATTGACGTTCTGGTCG
AATGGATGACAAATGGTATCGGTAATATCAATCAGGAAGTGATACGAAAC
CTATTTGGCTCTTCAAATTTGACAGAGCTGAAATCTAATATACTAGAGAG
GACACAAGATTCAAGTAAAAATATTTGCACAActtttttttctgtgtttt
ttttttccatgaCTTTTCGAGCTCATTTTTCGCCTTCTTCTAACGAAGTG
AGCAACGGCTTCATTTAGATGTCTGATAACAATAGTGGCAAgaatgattt
gaaaagaaagcgCATTGGTAAAAATGGACCTTACGAGAAATCGCTCGCTT
ACATTACAGATGGCAGAATGCGTCGAGCTAAAGAGAAAGCCAAGCTTGGG
CAGTTGGAAAAAGTTgtTTATGAAATATCTCTGCTGACAAAGACACCAGT
TGCTGTTATGGCCCTCAACTCCTACTCCCAGATTTGGATTGCAGGTACGA
CTGACAAAATGACTGAGTTTGTGAGTAACGAGGAACTCCAAAGCAAGTTT
GAAATGGCGGCGAAAGGTGATTCTGAACCGTACTATAATTTTCaaaAGAA
AAGACCGACACAGAATATTGTGGCAAATGAACAAGTAGACAGTGAGCAAG
AAGAATTCGATTTTCCCGTTGACTGGGCCAAGTTCAACACTCTTAAAAAA
AGAGTGCTAGTGAGAAATCTAGTTCGATGGTACACTGagaCGTGGAAACC
GTGGATCCCTTCACTCAAACCAGAATGGTGGCCGGATGACATATCATTTC
GGTCTACCCGAAAGTCTGATGTGTCATCTTTAGATAAGATATTAAATTCT
TTTCTGAAGTTTCGCGCTACAAGCAGTATGgctttgtttcAAGCATCGGA
TCTCCCTGTTTCCTCCGAACAGTGGGCTGAGCTGAATTGGGAAGACTTTG
ATTTCCCGAAAAACTGGCTTGCAAAGAATTGGTCACCGCCAAAAACTCCA
ATTAAAAAGAATCTAGTATCTCTAAGGCACCGTTGTTTAGTAGCCGATAC
AGATCTGGAGCCTGTTCGACTTCTTACATCAGCAGAATGCATTTCGTTTG
CATTATTTCATGATAAGAAATTTTGGCCTTTCATAAAGCTGGTTACCATA
ACGAGTTGCTTGTCACATATTGACGTTCTGGTCGAATGGATGACAAATGG
TATCGGTAATATCAATCAGGAAGTGATACGAAACCTATTTGGCTCTTCAA
ATTTGACAGAGCTGAAATCTAATATACTAGAGAGGACACAAGATTCAAGT
AAAAATATTTGCACAActtttttttctgtgttttttttttccatgaCTTT
TCGAGCTCATTTTTCGCCTTCTTCTAACGAAGTGAGCAACGGCTTCATTT
AGATGTCTGATAACAATAGTGGCAAgaatgatttgaaaagaaagcgCATT
GGTAAAAATGGACCTTACGAGAAATCGCTCGCTTACATTACAGATGGCAG
AATGCGTCGAGCTAAAGAGAAAGCCAAGCTTGGGCAGTTGGAAAAAGTTg
tTTATGAAATATCTCTGCTGACAAAGACACCAGTTGCTGTTATGGCCCTC
AACTCCTACTCCCAGATTTGGATTGCAGGTACGACTGACAAAATGACTGA
GTTTGTGAGTAACGAGGAACTCCAAAGCAAGTTTGAAATGGCGGCGAAAG
GTGATTCTGAACCGTACTATAATTTTCaaaAGAAAAGACCGACACAGAAT
ATTGTGGCAAATGAACAAGTAGACAGTGAGCAAGAAGAATTCGATTTTCC
CGTTGACTGGGCCAAGTTCAACACTCTTAAAAAAAGAGTGCTAGTGAGAA
ATCTAGTTCGATGGTACACTGagaCGTGGAAACCGTGGATCCCTTCACTC
AAACCAGAATGGTGGCCGGATGACATATCATTTCGGTCTACCCGAAAGTC
TGATGTGTCATCTTTAGATAAGATATTAAATTCTTTTCTGAAGTTTCGCG
CTACAAGCAGTATGgctttgtttcAAGCATCGGATCTCCCTGTTTCCTCC
GAACAGTGGGCTGAGCTGAATTGGGAAGACTTTGATTTCCCGAAAAACTG
GCTTGCAAAGAATTGGTCACCGCCAAAAACTCCAATTAAAAAGAATCTAG
TATCTCTAAGGCACCGTTGTTTAGTAGCCGATACAGATCTGGAGCCTGTT
CGACTTCTTACATCAGCAGAATGCATTTCGTTTGCATTATTTCATGATAA
GAAATTTTGGCCTTTCATAAAGCTGGTTACCATAACGAGTTGCTTGTCAC
ATATTGACGTTCTGGTCGAATGGATGACAAATGGTATCGGTAATATCAAT
CAGGAAGTGATACGAAACCTATTTGGCTCTTCAAATTTGACAGAGCTGAA
ATCTAATATACTAGAGAGGACACAAGATTCAAGTAAAAATATTTGCACAA
cttttttttctgtgttttttttttccatgaCTTTTCGAGCTCATTTTTCG
CCTTCTTCTAACGAAGTGAGCAACGGCTTCATTTAGATGTCTGATAACAA
TAGTGGCAAgaatgatttgaaaagaaagcgCATTGGTAAAAATGGACCTT
ACGAGAAATCGCTCGCTTACATTACAGATGGCAGAATGCGTCGAGCTAAA
GAGAAAGCCAAGCTTGGGCAGTTGGAAAAAGTTgtTTATGAAATATCTCT
GCTGACAAAGACACCAGTTGCTGTTATGGCCCTCAACTCCTACTCCCAGA
TTTGGATTGCAGGTACGACTGACAAAATGACTGAGTTTGTGAGTAACGAG
GAACTCCAAAGCAAGTTTGAAATGGCGGCGAAAGGTGATTCTGAACCGTA
CTATAATTTTCaaaAGAAAAGACCGACACAGAATATTGTGGCAAATGAAC
AAGTAGACAGTGAGCAAGAAGAATTCGATTTTCCCGTTGACTGGGCCAAG
TTCAACACTCTTAAAAAAAGAGTGCTAGTGAGAAATCTAGTTCGATGGTA
CACTGagaCGTGGAAACCGTGGATCCCTTCACTCAAACCAGAATGGTGGC
CGGATGACATATCATTTCGGTCTACCCGAAAGTCTGATGTGTCATCTTTA
GATAAGATATTAAATTCTTTTCTGAAGTTTCGCGCTACAAGCAGTATGgc
tttgtttcAAGCATCGGATCTCCCTGTTTCCTCCGAACAGTGGGCTGAGC
TGAATTGGGAAGACTTTGATTTCCCGAAAAACTGGCTTGCAAAGAATTGG
TCACCGCCAAAAACTCCAATTAAAAAGAATCTAGTATCTCTAAGGCACCG
TTGTTTAGTAGCCGATACAGATCTGGAGCCTGTTCGACTTCTTACATCAG
CAGAATGCATTTCGTTTGCATTATTTCATGATAAGAAATTTTGGCCTTTC
ATAAAGCTGGTTACCATAACGAGTTGCTTGTCACATATTGACGTTCTGGT
CGAATGGATGACAAATGGTATCGGTAATATCAATCAGGAAGTGATACGAA
ACCTATTTGGCTCTTCAAATTTGACAGAGCTGAAATCTAATATACTAGAG
AGGACACAAGATTCAAGTAAAAATATTTGCACAActtttttttctgtgtt
ttttttttccatgaCTTTTCGAGCTCATTTTTCGCCTTCTTCTAACGAAG
TGAGCAACGGCTTCATTTAGATGTCTGATAACAATAGTGGCAAgaatgat
ttgaaaagaaagcgCATTGGTAAAAATGGACCTTACGAGAAATCGCTCGC
TTACATTACAGATGGCAGAATGCGTCGAGCTAAAGAGAAAGCCAAGCTTG
GGCAGTTGGAAAAAGTTgtTTATGAAATATCTCTGCTGACAAAGACACCA
GTTGCTGTTATGGCCCTCAACTCCTACTCCCAGATTTGGATTGCAGGTAC
GACTGACAAAATGACTGAGTTTGTGAGTAACGAGGAACTCCAAAGCAAGT
TTGAAATGGCGGCGAAAGGTGATTCTGAACCGTACTATAATTTTCaaaAG
AAAAGACCGACACAGAATATTGTGGCAAATGAACAAGTAGACAGTGAGCA
AGAAGAATTCGATTTTCCCGTTGACTGGGCCAAGTTCAACACTCTTAAAA
AAAGAGTGCTAGTGAGAAATCTAGTTCGATGGTACACTGagaCGTGGAAA
CCGTGGATCCCTTCACTCAAACCAGAATGGTGGCCGGATGACATATCATT
TCGGTCTACCCGAAAGTCTGATGTGTCATCTTTAGATAAGATATTAAATT
CTTTTCTGAAGTTTCGCGCTACAAGCAGTATGgctttgtttcAAGCATCG
GATCTCCCTGTTTCCTCCGAACAGTGGGCTGAGCTGAATTGGGAAGACTT
TGATTTCCCGAAAAACTGGCTTGCAAAGAATTGGTCACCGCCAAAAACTC
CAATTAAAAAGAATCTAGTATCTCTAAGGCACCGTTGTTTAGTAGCCGAT
ACAGATCTGGAGCCTGTTCGACTTCTTACATCAGCAGAATGCATTTCGTT
TGCATTATTTCATGATAAGAAATTTTGGCCTTTCATAAAGCTGGTTACCA
TAACGAGTTGCTTGTCACATATTGACGTTCTGGTCGAATGGATGACAAAT
GGTATCGGTAATATCAATCAGGAAGTGATACGAAACCTATTTGGCTCTTC
AAATTTGACAGAGCTGAAATCTAATATACTAGAGAGGACACAAGATTCAA
GTAAAAATATTTGCACAActtttttttctgtgttttttttttccatgaCT
TTTCGAGCTCATTTTTCGCCTTCTTCTAACGAAGTGAGCAACGGCTTCAT
TTAGATGTCTGATAACAATAGTGGCAAgaatgatttgaaaagaaagcgCA
TTGGTAAAAATGGACCTTACGAGAAATCGCTCGCTTACATTACAGATGGC
AGAATGCGTCGAGCTAAAGAGAAAGCCAAGCTTGGGCAGTTGGAAAAAGT
TgtTTATGAAATATCTCTGCTGACAAAGACACCAGTTGCTGTTATGGCCC
TCAACTCCTACTCCCAGATTTGGATTGCAGGTACGACTGACAAAATGACT
GAGTTTGTGAGTAACGAGGAACTCCAAAGCAAGTTTGAAATGGCGGCGAA
AGGTGATTCTGAACCGTACTATAATTTTCaaaAGAAAAGACCGACACAGA
ATATTGTGGCAAATGAACAAGTAGACAGTGAGCAAGAAGAATTCGATTTT
CCCGTTGACTGGGCCAAGTTCAACACTCTTAAAAAAAGAGTGCTAGTGAG
AAATCTAGTTCGATGGTACACTGagaCGTGGAAACCGTGGATCCCTTCAC
TCAAACCAGAATGGTGGCCGGATGACATATCATTTCGGTCTACCCGAAAG
TCTGATGTGTCATCTTTAGATAAGATATTAAATTCTTTTCTGAAGTTTCG
CGCTACAAGCAGTATGgctttgtttcAAGCATCGGATCTCCCTGTTTCCT
CCGAACAGTGGGCTGAGCTGAATTGGGAAGACTTTGATTTCCCGAAAAAC
TGGCTTGCAAAGAATTGGTCACCGCCAAAAACTCCAATTAAAAAGAATCT
AGTATCTCTAAGGCACCGTTGTTTAGTAGCCGATACAGATCTGGAGCCTG
TTCGACTTCTTACATCAGCAGAATGCATTTCGTTTGCATTATTTCATGAT
AAGAAATTTTGGCCTTTCATAAAGCTGGTTACCATAACGAGTTGCTTGTC
ACATATTGACGTTCTGGTCGAATGGATGACAAATGGTATCGGTAATATCA
ATCAGGAAGTGATACGAAACCTATTTGGCTCTTCAAATTTGACAGAGCTG
AAATCTAATATACTAGAGAGGACACAAGATTCAAGTAAAAATATTTGCAC
AActtttttttctgtgttttttttttccatgaCTTTTCGAGCTCATTTTT
CGCCTTCTTCTAACGAAGTGAGCAACGGCTTCATTTAGATGTCTGATAAC
AATAGTGGCAAgaatgatttgaaaagaaagcgCATTGGTAAAAATGGACC
TTACGAGAAATCGCTCGCTTACATTACAGATGGCAGAATGCGTCGAGCTA
AAGAGAAAGCCAAGCTTGGGCAGTTGGAAAAAGTTgtTTATGAAATATCT
CTGCTGACAAAGACACCAGTTGCTGTTATGGCCCTCAACTCCTACTCCCA
GATTTGGATTGCAGGTACGACTGACAAAATGACTGAGTTTGTGAGTAACG
AGGAACTCCAAAGCAAGTTTGAAATGGCGGCGAAAGGTGATTCTGAACCG
TACTATAATTTTCaaaAGAAAAGACCGACACAGAATATTGTGGCAAATGA
ACAAGTAGACAGTGAGCAAGAAGAATTCGATTTTCCCGTTGACTGGGCCA
AGTTCAACACTCTTAAAAAAAGAGTGCTAGTGAGAAATCTAGTTCGATGG
TACACTGagaCGTGGAAACCGTGGATCCCTTCACTCAAACCAGAATGGTG
GCCGGATGACATATCATTTCGGTCTACCCGAAAGTCTGATGTGTCATCTT
TAGATAAGATATTAAATTCTTTTCTGAAGTTTCGCGCTACAAGCAGTATG
gctttgtttcAAGCATCGGATCTCCCTGTTTCCTCCGAACAGTGGGCTGA
GCTGAATTGGGAAGACTTTGATTTCCCGAAAAACTGGCTTGCAAAGAATT
GGTCACCGCCAAAAACTCCAATTAAAAAGAATCTAGTATCTCTAAGGCAC
CGTTGTTTAGTAGCCGATACAGATCTGGAGCCTGTTCGACTTCTTACATC
AGCAGAATGCATTTCGTTTGCATTATTTCATGATAAGAAATTTTGGCCTT
TCATAAAGCTGGTTACCATAACGAGTTGCTTGTCACATATTGACGTTCTG
GTCGAATGGATGACAAATGGTATCGGTAATATCAATCAGGAAGTGATACG
AAACCTATTTGGCTCTTCAAATTTGACAGAGCTGAAATCTAATATACTAG
AGAGGACACAAGATTCAAGTAAAAATATTTGCACAActtttttttctgtg
ttttttttttccatgaCTTTTCGAGCTCATTTTTCGCCTTCTTCTAACGA
AGTGAGCAACGGCTTCATTTAGATGTCTGATAACAATAGTGGCAAgaatg
atttgaaaagaaagcgCATTGGTAAAAATGGACCTTACGAGAAATCGCTC
GCTTACATTACAGATGGCAGAATGCGTCGAGCTAAAGAGAAAGCCAAGCT
TGGGCAGTTGGAAAAAGTTgtTTATGAAATATCTCTGCTGACAAAGACAC
CAGTTGCTGTTATGGCCCTCAACTCCTACTCCCAGATTTGGATTGCAGGT
ACGACTGACAAAATGACTGAGTTTGTGAGTAACGAGGAACTCCAAAGCAA
GTTTGAAATGGCGGCGAAAGGTGATTCTGAACCGTACTATAATTTTCaaa
AGAAAAGACCGACACAGAATATTGTGGCAAATGAACAAGTAGACAGTGAG
CAAGAAGAATTCGATTTTCCCGTTGACTGGGCCAAGTTCAACACTCTTAA
AAAAAGAGTGCTAGTGAGAAATCTAGTTCGATGGTACACTGagaCGTGGA
AACCGTGGATCCCTTCACTCAAACCAGAATGGTGGCCGGATGACATATCA
TTTCGGTCTACCCGAAAGTCTGATGTGTCATCTTTAGATAAGATATTAAA
TTCTTTTCTGAAGTTTCGCGCTACAAGCAGTATGgctttgtttcAAGCAT
CGGATCTCCCTGTTTCCTCCGAACAGTGGGCTGAGCTGAATTGGGAAGAC
TTTGATTTCCCGAAAAACTGGCTTGCAAAGAATTGGTCACCGCCAAAAAC
TCCAATTAAAAAGAATCTAGTATCTCTAAGGCACCGTTGTTTAGTAGCCG
ATACAGATCTGGAGCCTGTTCGACTTCTTACATCAGCAGAATGCATTTCG
TTTGCATTATTTCATGATAAGAAATTTTGGCCTTTCATAAAGCTGGTTAC
CATAACGAGTTGCTTGTCACATATTGACGTTCTGGTCGAATGGATGACAA
ATGGTATCGGTAATATCAATCAGGAAGTGATACGAAACCTATTTGGCTCT
TCAAATTTGACAGAGCTGAAATCTAATATACTAGAGAGGACACAAGATTC
AAGTAAAAATATTTGCACAActtttttttctgtgttttttttttccatga
CTTTTCGAGCTCATTTTTCGCCTTCTTCTAACGAAGTGAGCAACGGCTTC
ATTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025639XLOC_025639Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041721-exon-sc0002986-1491911889:6207..6332TCONS_00041721-exon-sc0002986-1491911889:6207..6332Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1510915933:6207..6332TCONS_00041721-exon-sc0002986-1510915933:6207..6332Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1575043694:6207..6332TCONS_00041721-exon-sc0002986-1575043694:6207..6332Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1491911889:6433..6504TCONS_00041721-exon-sc0002986-1491911889:6433..6504Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1510915933:6433..6504TCONS_00041721-exon-sc0002986-1510915933:6433..6504Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1575043694:6433..6504TCONS_00041721-exon-sc0002986-1575043694:6433..6504Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1491911889:6620..6698TCONS_00041721-exon-sc0002986-1491911889:6620..6698Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1510915933:6620..6698TCONS_00041721-exon-sc0002986-1510915933:6620..6698Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1575043694:6620..6698TCONS_00041721-exon-sc0002986-1575043694:6620..6698Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1491911889:7832..7933TCONS_00041721-exon-sc0002986-1491911889:7832..7933Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1510915933:7832..7933TCONS_00041721-exon-sc0002986-1510915933:7832..7933Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1575043694:7832..7933TCONS_00041721-exon-sc0002986-1575043694:7832..7933Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1491911889:8227..8367TCONS_00041721-exon-sc0002986-1491911889:8227..8367Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1510915933:8227..8367TCONS_00041721-exon-sc0002986-1510915933:8227..8367Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1575043694:8227..8367TCONS_00041721-exon-sc0002986-1575043694:8227..8367Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1491911889:8738..8880TCONS_00041721-exon-sc0002986-1491911889:8738..8880Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1510915933:8738..8880TCONS_00041721-exon-sc0002986-1510915933:8738..8880Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1575043694:8738..8880TCONS_00041721-exon-sc0002986-1575043694:8738..8880Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1491911889:9708..9853TCONS_00041721-exon-sc0002986-1491911889:9708..9853Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1510915933:9708..9853TCONS_00041721-exon-sc0002986-1510915933:9708..9853Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1575043694:9708..9853TCONS_00041721-exon-sc0002986-1575043694:9708..9853Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1491911889:10433..10595TCONS_00041721-exon-sc0002986-1491911889:10433..10595Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1510915933:10433..10595TCONS_00041721-exon-sc0002986-1510915933:10433..10595Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1575043694:10433..10595TCONS_00041721-exon-sc0002986-1575043694:10433..10595Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1491911889:10839..11161TCONS_00041721-exon-sc0002986-1491911889:10839..11161Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1510915933:10839..11161TCONS_00041721-exon-sc0002986-1510915933:10839..11161Clytia hemisphaericaexon
TCONS_00041721-exon-sc0002986-1575043694:10839..11161TCONS_00041721-exon-sc0002986-1575043694:10839..11161Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041721-proteinTCONS_00041721-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002986supercontigsc0002986:6207..11161 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.105275	0	0.0369887	0.0361877	2.4096	1.74469	2.43798	2.75832	2.14047	2.97456	2.3627	3.17597	2.09389	2.44238	1.98534	2.26974	1.99991	4.29208	2.67676	2.80679	2.54534	2.85584	0.573785	1.62569	1.64271	1.56516	5.45891	3.53996	1.31046	1.43725
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041721 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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