XLOC_025544 (gene) - C. hemisphaerica

Overview
NameXLOC_025544
Unique NameXLOC_025544
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002937:15335..20114+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025544 ID=XLOC_025544|Name=XLOC_025544|organism=Clytia hemisphaerica|type=gene|length=4780bp|location=Sequence derived from alignment at sc0002937:15335..20114+ (Clytia hemisphaerica)
CAGGGtactatttgaaactatgacacaagtaccctatgtgcttcactgtg cgaactcactgcgattgaccgaggccgctccgaagagacgcctcacctga cggaaacttacagcttgggccgacaaaaaagttttttgggctGACAAGGA ATTTCTTTGGCCGAAcaagaaagattttttggccgacaaagaaagatttt ttggccgaacaaaaaaatttttttggccgttagaaaaaatttttgggccg acaaaaaaattttttgggcctgaCAAAAGATTTGGACCAAATACCCCCGA GACTACCACTACACACCCCACACGCCCTATATCTGCACACCGCCCCGACT CTACTATATCTGAACACCGCATCGACTCTACTATACATCTAAGCTACATC TCAAGTACCTTGAGTGACCCCCCGGGGAGATACCAGAAAACCGTTAAACT AATCCCACCCTACACCACCTCCCGCAAACTACCGCCACCATACTACACGG AAACTCAAACTTGGCACCCATCAAGACACACTACCCTACTTAAAAATATA GAAAAACATCATCCACTACTCATCTATCTTAACTCTACCACCACCCTTAC CACCCACGCTCGAACCACCCCCGTACACATTTATCTCACGGCAAACCACC CCACAGCACATATTAACAAAAAATGAAACCAATCCAAACAATGGACTACG TCATTAGCACAACAAAAGCTTTCCACCATGAGAGGGCCCAAACAAAAGGG CTGTCTATGGCAACAACAAACGCGCTATCGAAGCGAACCAATCACAATAA ACCTGAAACAAGAAAAACCAATCATGACCCGGAGATAAGAACAACCAATC AGAAACAGAAAAAACCAAACACGTGACCATTGCACACAACAACTGCACAA AAAGAAACACGCGAACCAAAAACATCCTTTTTGAAGATAAACCACACTGA CAAGATGAGCTCACAAGATCTATTTGAATCTGGTAAGTTCCTTACATATA TTTACTTGATTTTTCAAGCTCCAAAACCCATAGAAATACATTAAAAAATA CCCCACACCACTCCAAACAAAATTACTTTCCGAAAGAGTGTTCTCCATGA GGATGTTACCCACACACGAGTAACATGGCCCAACTATCATGAGAAGTTAT CGAAATAAGGGCCGAAAACTTTGATTGAGTGATAGACTTTCGACAGAAGA CCTCCGTAAACACTCTCGGAAAAATGAAACGCCACCATACGTTTTCATGC ACAATGAACGTTCAAAAGTGATAAACCCTCGAAGAAAATCGAAAATTTCA AACCCAACCTACTAATCTATGGCAAATGCTATAACCCTCAGCCCATAGAA AAATATTAGGTAGTACTCTTATTCCCTCGACCATGAGGAAATTTGACGAA AGTCTTGAAAAGAATTTCGAAAAATGTTAAAAAATTGTCTTCAATTATGG GCAACTGCACATAATTAACTTATAGAGGAAACCTACACAAAAATAATGGG ATGTAAATGACAAGGTCTTTACTACCCATGAAACACAATTTTTCCAAAAA ACACTATCCAAAACCCCTTCAAAAAATTACACCAGATTATTTAAATTTAA AAAACTATAACCGAAAAATCAATTTACTATATGATAACTAATCAATCAGT TGAATAACTTACCAACCCAACAAAAATCTTGGACAACCAAAATCTACACA AACCAAAATATCCTTGCTCGACAAAAAATCGAGAAAACCTAATCATTCTT CAAAATAACGAAACCACCTTATCACCTCTATGAAAACTATGTCTCAACAA AAAAATTTTTCCTAAAAAACTTCAAAAAATTTTCTAAAAAAACAACAACA AAAAAAGTACGCAAAAAAACTTCAACTTCAAAAAAACTCACACATAACAA ACATATCAAAAAAATTTTCAACAAATTTCGCAAAAAACTGAACACGAACG CTGAAAAAATATTCAACAATAGAAATAATATGGTCCAACCATTATATTCT ATTATCCCCCATTATTTAAAACAGTTTACATTCTTTCGACTACGAACTCA CCATTATACATAAAAAATGAGAAATTATACAAAGAAAAAGCCCCACTCGT ATTTTAAAGTTTATTTCTTTCATAAGAACACATACCAATTAACATCATAC CACTACACTAAATTGACTTAAGAACTAATTACAAATTCTTATAAATACAA AGAAAAAAGAAAAACCCCACTCTTATTTTTACAGCTCACCACTTTTATAA GAACACAAATTAACATTGCACAATTACACTAATTCAACTAAAGAACTGAA TATAAATTCTTATAAAATACGAATGTGCACAAAACTCAAAATAGACCCCA CCCCAAATCTTTATATACAAAAAAATACACATAAACTCTTATAAACAAAA TATTACAACCACAATAAACTTCATAGATTACATATATAAAAAAACCGTAG AAGCTCTTAGAAAAAGAAGGCATTGCATATATAGACAAACTACACCTAAA ACGTAAGACACCACGACAAATACCAATTGTAATATTGAATACTAAAAACA AACCTAATAAACTGTGATCCCTAGATTAGAATCATTTAACTTCTTCACTA TATTACCTCTACAGGAAATGAGGAAAACATCTCACCACCAATGACCACAG CCAAGACCACCAAACCAACCAAGGAAAACCTCTCACCACCAATGACCACA ACCAAGACCACAACCAACGCCGCAAAACGAACCGCGAGAACACTGGAATA CAAAGATCCCCCAGAACAAAACATAGACCCGTTCCTCGAGGAAATCGACA GAACAATCACACTAACACAACGTGCAAACACAGAGAGACAACAACAGAAG GTATCACACCAAGCCGTACAGGAATATAAATGGCATACACTACAAGCAAT AAGCACCAACAATCAAATTATGCAACTAACCAGACACAGGAACAAAGAAA CCGTACCGATAGGCTTAATACCAACTGTGACATCAAAGGTCACGAACCAA CTCAACACTGACCACCGAAAACAATGGGACAAAATACTGACAAAAGCAGC ACATGAACTAAGAGACGTCCTAATCGAACACCACACCTCAAAGAAGGAAT ACCACAAGGGACTTAGAGAACTGGCAAGAGAGAAACTTTCTGACGAGAAC TTAAAAACGGTAAATGAGGAGATCCAAAAACAAAGACGGACACCACCGCC CACCGAAAATAAACGCCCCAACAATAAGAGAAGACACAGCCACCACGACG ACCAACAACAAGAGTCAAAAAAGTGATTTATAATGTATATAATGTAAATA GTAAAACTCATAAACAAGAAAAAGATATACCTGCAAACAAAAAAACCAAA ACGGATACCTTCCAAAAATACCCACAACTAGACATAAACCACTACCACAA GAAAACAACACAAAAAACAAAAAATACTACTGTCAAAAACTTTTCGAACA TGACGCTAAAAAAAGTAGAATTGAACCTGTTAGATAAAGGACTAACTTTT GTACCAACACCAAAAACAACACACATAAAAAAACATATACAACACGCCCT AAGAACCTTTACAAATAGAATATTCACTAAATATTTTTTCTCGAAAAAGC CTTCAAAACCAAAACTTTTATATAGAACTAAACAATGGAAACCACCAATC CCCAACAATAGAACATTAAAAGCATACATTAGAAAAACTAAATTTGAAAT CAACAGATTTATACAAAAAAACAAAAACAGAAGCCTAAAACAAAACTTGA ACCCGCACGAGACTAAAACATTAAAAAGATTATCCCAAAACAAAAACATC GAAATAAAACCAGCTGATAAGGGTGGAGCCCTGGTCATCATGAACAAGAC CTGCTATAAATCCAAAGTTTTCGACCATCTTAACGATGAAAAATCATATG AGCTAATAAAGGAAGAACAAACCTCAGACCTAAAAACCAACATTGAAGCT TTCTTAACCACCATAGCCTACCACTACCATATTGACAAAAACACATTTGA ATACTTAATACCACCAAACAAGCCACGCATTGGCCTATTCTATATAACAC CAAAAATCCACAAACCAAAAATCCCAGGAAGACCAATTGTTTCCGCAGTG AACTCGGTAACAGAGAACATTTCTGAATTCCTGACGAAATGTGTCCAACC ACTAACCTTAACACTAAAATCATTTATCAAAGATACAAAACACTTTCTAC AGAAAACTATAGACCACAATTCGAGCAACACAACATACCTAGTGACATTT GACATCAAATCCTTATACACAAACATACCCCACGAAGAAGGCATAGAAGC ATGCCTACACTATATAAATAAAAACCACCTAGATATACCAAAATTCACCC CAAACAACAGAATTCTTCACACCCTGTTCCTTTTTATACTcgaaaacaat tattttgaatttaaagaccggaaatataaacaaaaatttggtacTAGCAT GGGAACGAGGGTTGCCCCTAGCTACGCAACCCTGTTCCTAGGAAAAATGG AGGAGGATAAAATACTAATTGAACCATTCAAATCAAAAATCTCCAAATAC TCAAGATTTTTGGACGATATCTTTTTACTATGGAACAGTAGTCTAGATGA ACTACTCAAGTTTGAAAAATACCTAAACAATATCCACCCAACAATAAAAT TCACGATGGAATACTCGACCAAAGAAATCAACTTCTTGGACACGACCATA TACATTGATGAAAAAACTAGTAAACTCAAAAGTAAGGTATTTATCAAACC CACAGACGCAAGGTCCTTACTACATTACAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041609TCONS_00041609Clytia hemisphaericatranscript
TCONS_00041610TCONS_00041610Clytia hemisphaericatranscript
TCONS_00041611TCONS_00041611Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041609-proteinTCONS_00041609-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002937supercontigsc0002937:15335..20114 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.42 0.62 0.3 0.6 2.94 2.2 2.88 3.29 1.39 1.87 1.63 1.19 1.32 1.37 1.46 2.42 1.26 1.48 1.46 1.18 0.86 0.97 0.26 0.51 1.17 0.99 0.82 0.48 0.4 0.36