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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041611 ID=TCONS_00041611|Name=TCONS_00041611|organism=Clytia hemisphaerica|type=transcript|length=2874bp
CAAAAAAATTTTCAACAAATTTCGCAAAAAACTGAACACGAACGCTGAAA
AAATATTCAACAATAGAAATAATATGGTCCAACCATTATATTCTATTATC
CCCCATTATTTAAAACAGTTTACATTCTTTCGACTACGAACTCACCATTA
TACATAAAAAATGAGAAATTATACAAAGAAAAAGCCCCACTCGTATTTTA
AAGTTTATTTCTTTCATAAGAACACATACCAATTAACATCATACCACTAC
ACTAAATTGACTTAAGAACTAATTACAAATTCTTATAAATACAAAGAAAA
AAGAAAAACCCCACTCTTATTTTTACAGCTCACCACTTTTATAAGAACAC
AAATTAACATTGCACAATTACACTAATTCAACTAAAGAACTGAATATAAA
TTCTTATAAAATACGAATGTGCACAAAACTCAAAATAGACCCCACCCCAA
ATCTTTATATACAAAAAAATACACATAAACTCTTATAAACAAAATATTAC
AACCACAATAAACTTCATAGATTACATATATAAAAAAACCGTAGAAGCTC
TTAGAAAAAGAAGGCATTGCATATATAGACAAACTACACCTAAAACGTAA
GACACCACGACAAATACCAATTGTAATATTGAATACTAAAAACAAACCTA
ATAAACTGTGATCCCTAGATTAGAATCATTTAACTTCTTCACTATATTAC
CTCTACAGGAAATGAGGAAAACATCTCACCACCAATGACCACAGCCAAGA
CCACCAAACCAACCAAGGAAAACCTCTCACCACCAATGACCACAACCAAG
ACCACAACCAACGCCGCAAAACGAACCGCGAGAACACTGGAATACAAAGA
TCCCCCAGAACAAAACATAGACCCGTTCCTCGAGGAAATCGACAGAACAA
TCACACTAACACAACGTGCAAACACAGAGAGACAACAACAGAAGGTATCA
CACCAAGCCGTACAGGAATATAAATGGCATACACTACAAGCAATAAGCAC
CAACAATCAAATTATGCAACTAACCAGACACAGGAACAAAGAAACCGTAC
CGATAGGCTTAATACCAACTGTGACATCAAAGGTCACGAACCAACTCAAC
ACTGACCACCGAAAACAATGGGACAAAATACTGACAAAAGCAGCACATGA
ACTAAGAGACGTCCTAATCGAACACCACACCTCAAAGAAGGAATACCACA
AGGGACTTAGAGAACTGGCAAGAGAGAAACTTTCTGACGAGAACTTAAAA
ACGGTAAATGAGGAGATCCAAAAACAAAGACGGACACCACCGCCCACCGA
AAATAAACGCCCCAACAATAAGAGAAGACACAGCCACCACGACGACCAAC
AACAAGAGTCAAAAAAGTGATTTATAATGTATATAATGTAAATAGTAAAA
CTCATAAACAAGAAAAAGATATACCTGCAAACAAAAAAACCAAAACGGAT
ACCTTCCAAAAATACCCACAACTAGACATAAACCACTACCACAAGAAAAC
AACACAAAAAACAAAAAATACTACTGTCAAAAACTTTTCGAACATGACGC
TAAAAAAAGTAGAATTGAACCTGTTAGATAAAGGACTAACTTTTGTACCA
ACACCAAAAACAACACACATAAAAAAACATATACAACACGCCCTAAGAAC
CTTTACAAATAGAATATTCACTAAATATTTTTTCTCGAAAAAGCCTTCAA
AACCAAAACTTTTATATAGAACTAAACAATGGAAACCACCAATCCCCAAC
AATAGAACATTAAAAGCATACATTAGAAAAACTAAATTTGAAATCAACAG
ATTTATACAAAAAAACAAAAACAGAAGCCTAAAACAAAACTTGAACCCGC
ACGAGACTAAAACATTAAAAAGATTATCCCAAAACAAAAACATCGAAATA
AAACCAGCTGATAAGGGTGGAGCCCTGGTCATCATGAACAAGACCTGCTA
TAAATCCAAAGTTTTCGACCATCTTAACGATGAAAAATCATATGAGCTAA
TAAAGGAAGAACAAACCTCAGACCTAAAAACCAACATTGAAGCTTTCTTA
ACCACCATAGCCTACCACTACCATATTGACAAAAACACATTTGAATACTT
AATACCACCAAACAAGCCACGCATTGGCCTATTCTATATAACACCAAAAA
TCCACAAACCAAAAATCCCAGGAAGACCAATTGTTTCCGCAGTGAACTCG
GTAACAGAGAACATTTCTGAATTCCTGACGAAATGTGTCCAACCACTAAC
CTTAACACTAAAATCATTTATCAAAGATACAAAACACTTTCTACAGAAAA
CTATAGACCACAATTCGAGCAACACAACATACCTAGTGACATTTGACATC
AAATCCTTATACACAAACATACCCCACGAAGAAGGCATAGAAGCATGCCT
ACACTATATAAATAAAAACCACCTAGATATACCAAAATTCACCCCAAACA
ACAGAATTCTTCACACCCTGTTCCTTTTTATACTcgaaaacaattatttt
gaatttaaagaccggaaatataaacaaaaatttggtacTAGCATGGGAAC
GAGGGTTGCCCCTAGCTACGCAACCCTGTTCCTAGGAAAAATGGAGGAGG
ATAAAATACTAATTGAACCATTCAAATCAAAAATCTCCAAATACTCAAGA
TTTTTGGACGATATCTTTTTACTATGGAACAGTAGTCTAGATGAACTACT
CAAGTTTGAAAAATACCTAAACAATATCCACCCAACAATAAAATTCACGA
TGGAATACTCGACCAAAGAAATCAACTTCTTGGACACGACCATATACATT
GATGAAAAAACTAGTAAACTCAAAAGTAAGGTATTTATCAAACCCACAGA
CGCAAGGTCCTTACTACATTACAC Run BLAST on NCBI transcript from alignment at sc0002937:17241..20114+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041611 ID=TCONS_00041611|Name=TCONS_00041611|organism=Clytia hemisphaerica|type=transcript|length=2874bp|location=Sequence derived from alignment at sc0002937:17241..20114+ (Clytia hemisphaerica)
CAAAAAAATTTTCAACAAATTTCGCAAAAAACTGAACACGAACGCTGAAA
AAATATTCAACAATAGAAATAATATGGTCCAACCATTATATTCTATTATC
CCCCATTATTTAAAACAGTTTACATTCTTTCGACTACGAACTCACCATTA
TACATAAAAAATGAGAAATTATACAAAGAAAAAGCCCCACTCGTATTTTA
AAGTTTATTTCTTTCATAAGAACACATACCAATTAACATCATACCACTAC
ACTAAATTGACTTAAGAACTAATTACAAATTCTTATAAATACAAAGAAAA
AAGAAAAACCCCACTCTTATTTTTACAGCTCACCACTTTTATAAGAACAC
AAATTAACATTGCACAATTACACTAATTCAACTAAAGAACTGAATATAAA
TTCTTATAAAATACGAATGTGCACAAAACTCAAAATAGACCCCACCCCAA
ATCTTTATATACAAAAAAATACACATAAACTCTTATAAACAAAATATTAC
AACCACAATAAACTTCATAGATTACATATATAAAAAAACCGTAGAAGCTC
TTAGAAAAAGAAGGCATTGCATATATAGACAAACTACACCTAAAACGTAA
GACACCACGACAAATACCAATTGTAATATTGAATACTAAAAACAAACCTA
ATAAACTGTGATCCCTAGATTAGAATCATTTAACTTCTTCACTATATTAC
CTCTACAGGAAATGAGGAAAACATCTCACCACCAATGACCACAGCCAAGA
CCACCAAACCAACCAAGGAAAACCTCTCACCACCAATGACCACAACCAAG
ACCACAACCAACGCCGCAAAACGAACCGCGAGAACACTGGAATACAAAGA
TCCCCCAGAACAAAACATAGACCCGTTCCTCGAGGAAATCGACAGAACAA
TCACACTAACACAACGTGCAAACACAGAGAGACAACAACAGAAGGTATCA
CACCAAGCCGTACAGGAATATAAATGGCATACACTACAAGCAATAAGCAC
CAACAATCAAATTATGCAACTAACCAGACACAGGAACAAAGAAACCGTAC
CGATAGGCTTAATACCAACTGTGACATCAAAGGTCACGAACCAACTCAAC
ACTGACCACCGAAAACAATGGGACAAAATACTGACAAAAGCAGCACATGA
ACTAAGAGACGTCCTAATCGAACACCACACCTCAAAGAAGGAATACCACA
AGGGACTTAGAGAACTGGCAAGAGAGAAACTTTCTGACGAGAACTTAAAA
ACGGTAAATGAGGAGATCCAAAAACAAAGACGGACACCACCGCCCACCGA
AAATAAACGCCCCAACAATAAGAGAAGACACAGCCACCACGACGACCAAC
AACAAGAGTCAAAAAAGTGATTTATAATGTATATAATGTAAATAGTAAAA
CTCATAAACAAGAAAAAGATATACCTGCAAACAAAAAAACCAAAACGGAT
ACCTTCCAAAAATACCCACAACTAGACATAAACCACTACCACAAGAAAAC
AACACAAAAAACAAAAAATACTACTGTCAAAAACTTTTCGAACATGACGC
TAAAAAAAGTAGAATTGAACCTGTTAGATAAAGGACTAACTTTTGTACCA
ACACCAAAAACAACACACATAAAAAAACATATACAACACGCCCTAAGAAC
CTTTACAAATAGAATATTCACTAAATATTTTTTCTCGAAAAAGCCTTCAA
AACCAAAACTTTTATATAGAACTAAACAATGGAAACCACCAATCCCCAAC
AATAGAACATTAAAAGCATACATTAGAAAAACTAAATTTGAAATCAACAG
ATTTATACAAAAAAACAAAAACAGAAGCCTAAAACAAAACTTGAACCCGC
ACGAGACTAAAACATTAAAAAGATTATCCCAAAACAAAAACATCGAAATA
AAACCAGCTGATAAGGGTGGAGCCCTGGTCATCATGAACAAGACCTGCTA
TAAATCCAAAGTTTTCGACCATCTTAACGATGAAAAATCATATGAGCTAA
TAAAGGAAGAACAAACCTCAGACCTAAAAACCAACATTGAAGCTTTCTTA
ACCACCATAGCCTACCACTACCATATTGACAAAAACACATTTGAATACTT
AATACCACCAAACAAGCCACGCATTGGCCTATTCTATATAACACCAAAAA
TCCACAAACCAAAAATCCCAGGAAGACCAATTGTTTCCGCAGTGAACTCG
GTAACAGAGAACATTTCTGAATTCCTGACGAAATGTGTCCAACCACTAAC
CTTAACACTAAAATCATTTATCAAAGATACAAAACACTTTCTACAGAAAA
CTATAGACCACAATTCGAGCAACACAACATACCTAGTGACATTTGACATC
AAATCCTTATACACAAACATACCCCACGAAGAAGGCATAGAAGCATGCCT
ACACTATATAAATAAAAACCACCTAGATATACCAAAATTCACCCCAAACA
ACAGAATTCTTCACACCCTGTTCCTTTTTATACTcgaaaacaattatttt
gaatttaaagaccggaaatataaacaaaaatttggtacTAGCATGGGAAC
GAGGGTTGCCCCTAGCTACGCAACCCTGTTCCTAGGAAAAATGGAGGAGG
ATAAAATACTAATTGAACCATTCAAATCAAAAATCTCCAAATACTCAAGA
TTTTTGGACGATATCTTTTTACTATGGAACAGTAGTCTAGATGAACTACT
CAAGTTTGAAAAATACCTAAACAATATCCACCCAACAATAAAATTCACGA
TGGAATACTCGACCAAAGAAATCAACTTCTTGGACACGACCATATACATT
GATGAAAAAACTAGTAAACTCAAAAGTAAGGTATTTATCAAACCCACAGA
CGCAAGGTCCTTACTACATTACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041611-exon-sc0002937-1491911889:17241..20114 | TCONS_00041611-exon-sc0002937-1491911889:17241..20114 | Clytia hemisphaerica | exon |
| TCONS_00041611-exon-sc0002937-1510915933:17241..20114 | TCONS_00041611-exon-sc0002937-1510915933:17241..20114 | Clytia hemisphaerica | exon |
| TCONS_00041611-exon-sc0002937-1575043694:17241..20114 | TCONS_00041611-exon-sc0002937-1575043694:17241..20114 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002937 | supercontig | sc0002937:17241..20114 + |
Blast
The following BLAST results are available for this feature:
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