XLOC_025034 (gene) - C. hemisphaerica

Overview
NameXLOC_025034
Unique NameXLOC_025034
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002659:11918..15667+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025034 ID=XLOC_025034|Name=XLOC_025034|organism=Clytia hemisphaerica|type=gene|length=3750bp|location=Sequence derived from alignment at sc0002659:11918..15667+ (Clytia hemisphaerica)
CCAAACTAAAGGTTCAGAAAGActttaatttaaatttagaaaagcaTAAA
ATTATACTAGAAGACGTGTCATTTATTACATCAACAAGGTAATCCAAGAA
TGGCTATCTATAAATCAATTATCATCCATGATGACCACATTGGCGGTgat
cctttttttattttgatcctTTACAGTTTGAACTCACTGCATACTTTGCA
ATCTTTCCAATTATGCAGGGAAATATTTGGATTGCATGCTGTCAAGAGCT
TAAGTATTCTACCTCTCTTTTACCACCGTCCACATGTTTTTACTTGACAT
GCAAAAAAGCTCTCCTTAACTGAGACCTTAATCCTATAAAAGCAGCTGGT
ACAATCGAAAGACCATGATCTGAGCCTAGATTACTTAGTAAAAGACTGAA
TTTACTGTTTTATGCTCCAAAGCAACTCTTTGGGTTTTCAAAATGCCCCA
AGACAGGGGGGGTGCTATTTGTAGCTTTAATAAGTAAGTGCACTTTTCCT
GCATGGCATAACTTatattttttgcacttttttggacacaaataagtttc
tttttccAGGGAGATGCTTGATCAGTTGGAATTCATCATTCACAATTTTC
TCACAGACGGAAGTATGAAGATTTGAGTGATGAAGAAACAGGTACAGGTC
TTTGTATAATGTGTTTTGTTATAATATTGAGGTACCACTAAATTTTGACT
CAGCCCAAGCTCTTCTCTTAATAGATTTAAAATTTACTTACAGTACAATG
ATTTCTATTACATCTAGCCTCGATATCCAGACTTTTTTGGACAGTCTAGT
TGAAGTATTTTTATCTATGGTTTACGGTCTGATTTACCTAGATCCTCTGC
ATTCAAATCTGTGGATGTAAGTGATTGTTCGATGGCTGCAAGATATAACC
TTAGGATGTTGAGGTTCTTCGACAAACAGTTTTCAATAAGATGATAGATA
TTAATCACTCTAAGACTGAAAATGGCTTTAGAGAATTAATTGAAACTAGC
ATCATCTTAAGTAATCATCCAAACCTGGTGGAACGACCGTAAAAGTGGAG
GGGCTGAAGGCTAATATTAGTCAAATTTTGCTtggaaattgagaaaaaag
tagaTTTCGATATTAAAGCATCCCCGCTTTCCCCCAAGCCTGTCCTCTGG
AGCCAAATTTCAACCTATAATAGAGGTCACGTCCTGTTCAAGTTGCACAT
CTTATAACACAgcattaaagggacataacagtacttgcgaaaattgtaaa
caaactgtatgcagcggatacaaaatcaaaacaaatgtcacatgtcagaa
tataaaaatcaaaccaaatatggctaattttgattgttcaattgtttatT
ACAAGTTtcttttggacacgtgattttaattgttctctttaatgacacgt
ggttcgcgcaatgtttacatctTACTactttatgtccctttaaactaTAA
CCATTCAATGATATGATAAACAATAATGAGTAACATGTATctcgttttaa
atttttcgtctTATAGGAAGAATATCAAAGTTGGTCAGTCAAAATTCACC
AAGACgtccaaagttttaaaattgatcGCAAGCAAAGAAAACAgcatgaa
atttcaaaaaatggaagcATGGTCactaaagaaaaagtaaagccaGGACT
TCACATCTCATCAAGGTCTCAGATAGTTTCATATAAACTAAATGAAAATC
ATGATGTCCAAAATCTGATTGataaaatgattttattgaagTTTATCAGC
TGTTTTGTTCTCTATTTTAATCAGTTTGAATAAATAAACAACATACCTCC
CACCACACAATTTTCATCTTCCCACCAAGTTTCCATTATTATTACTAAGc
aaatttttaaattcattcAAGTGTTTCAAGGTATATAAGTATTCATTGAT
ATTAACTTTAGATTCCAGCCTCCACAAACCAGTATTCACATCAATATCAA
CGTAACGAGAGGGAGCTTACTTTCCATCGGACCATTACAGCGTAGTCATA
TAGGATGCTTAATTATTGACTGGATGGCATAGCCCTTGGTAatgaaaatc
atcatcatcatcatcatccttcgatctAGGTCCGATGGAAAATACCCAGG
TACGACAATTGAAATCACGGGCAaatgtttttatctttgtgTATCCTTAC
TATGTTTCTTTTAAAGgttaaaagcttttttctatttttcagaagaTTAC
TAAACAAAGGTTTTCGTATCAGTGTACAGAATTATTGAACCATCAGTGGT
AGTTTGTATTGACCCTAAAGAATATTTTGTTTCTGGTCCAGCTTGAAAAT
TGTCGTAACCTGGCcgaattttttctctttgaactttccaaatgttttca
aaatttcccattttaacattttctacACACACACACAAGTGATCTAAAAC
AATCTTTCCACATTTTTCATTTCGTACTCCTTCAATCCCAATTTCATGgg
cttttcttttcaaattttaattgaaatctcatttttttaattatcgatat
aaaaaatttgatatatGATATCATGACAACACATGAAATTATGAGAATCT
TTTTTGTGAGTATAAAAggttttccattgtattttccgATTAACTAAGGA
TAAGCTGATGTAGGAGTATTTGATTTTGTTAAtacttttcatttcatttt
taggaCAAATTATCTCATTGTCTTCGATGAGGTTTACTGTATCAAAGCGA
TGATATCCCAATTAAAACAAACGTATGGTTTGACTGTAAAAACCGTCAAA
AACAGCTTGAAAGAATTATGGTACAAGTCTCCCTTATATTTCATAATAAC
AGAAACAATTTCTAACTGTATGTTTGATCTCTAATAATTTCATCAATATC
ATCATATTCATCTTTATTGAACTACATGGGGTCTCCCAAGTTTACACACA
ACGTCATTTTCTTGGTTGTTAaactttttggaagaaaattCATATGCTGG
GGAGTGACGTTTTTCtagaagattttattttcacttattGAGAATTGTCC
ATGGGaatgaaattaatttattttgattttatttttttagatgaGAAAAT
TGTTGTTTGTCCAGTTTCGCGCCCAAAAAATCCATGAAATGTTTGCTGCA
GAATCAGAAGAAGTTGAAGAAAGTGCTGTCTGAGGGTAAGGAATTAATTT
TACGAAATTGCTTGCGCTGTAAGAAATTAAATTGATTACAATATTTTGGT
CACACTTTTCTCATGAAATCGATCAGAATCAATCTGGATGAATTCTGCAT
AAAAGGGAACTATGTTAAGATTCATCGCATGTTTGAATGACCTTAAAGGT
CTGAAACATTTAAATTGACTCGAAATCTTTTGTCTTTGGACTATTGGATG
CAATCCTCTGTTAAAGTTGATAGGTGTATGAGAAATTTCACGATCGCAAT
GAATCTCGCTCAAAATTGATTTAAGGTTTGAAAGTCTTCTCAATGACAAA
AGTGAATTTACTATTACAGAGCAACTAGTCTCGATTCCCCCTGATTTATT
GATTcattcaattctgttttgattattatttttgctTATTACCTATAGAG
GTTCACCTTGCAGAAGATAATNTTGTTTTGATTACTATTTTTGCTTATTA
CCTATAGAGGTTCACCTTGCAGAAGATAATGTTCTCATTCATCCAATATT
TCTTCAAACTGTCCAATCACGGAGCTCTGCTCTTCCTATCATCCATCAGT
CACGAAACGTCATCAGTCATCAAATGAGAAAGTCCTCAGTAAGCTGGTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040998TCONS_00040998Clytia hemisphaericatranscript
TCONS_00040999TCONS_00040999Clytia hemisphaericatranscript
TCONS_00041000TCONS_00041000Clytia hemisphaericatranscript
TCONS_00041001TCONS_00041001Clytia hemisphaericatranscript
TCONS_00041002TCONS_00041002Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002659supercontigsc0002659:11918..15667 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.7	1.36	0.71	0.89	6.89	6.44	5.08	7.11	2.85	3.54	4.1	3.96	2.78	3.04	1.88	2.4	4.05	2.94	0.74	1.72	1.86	3.19	1.65	1.6	5.48	6.79	1.44	0.56	1.85	1.87