XLOC_025007 (gene) - C. hemisphaerica

Overview
NameXLOC_025007
Unique NameXLOC_025007
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002645:3233..7423+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025007 ID=XLOC_025007|Name=XLOC_025007|organism=Clytia hemisphaerica|type=gene|length=4191bp|location=Sequence derived from alignment at sc0002645:3233..7423+ (Clytia hemisphaerica)
ATTAAAACTGTTTATGGCTGATATACATTTGTTTTCTAGTATTTATGGTA
AGTTGGTAATTTGATAAAGATCTGTAAAGATCGAAATATcgtttaaaaaa
atatgtatcttttgttttgaaatttcctgattcaCACAACCTTGgctttt
tatgtttgatttatGGTAAGTTGGTAAGCAAAAGTTATTTTGATCCACGA
AATATTATAACAGtcatttctatttattttttagagTTAAATTACGAAAA
AGTGATGAATataaattatattaaatatcTACTAACGGAAGTTTGAAGAA
TGGATTCAGAAAAGTACATAGTGTTAGACAACGTGACATACAAAGTTTTA
GAGCGTAAAGGAGAGCAATGCGACTTGGAAGGTACAGTAAAAAACAAATG
GCGTTGGTGCTGGTTAGAGGAGAGAGACTTGGGACCGCACAAAGACTTTT
TGTCAGATTACATCGTCAAGATAAATAAACCAGGCTATGCATATTGTACA
TATTGCAAAACGCCAATATCATACGGTTCTGCGGGTAAAAATAACCTTCG
AAAACACGCACAGACTAAGGAAAAACATAAGAAGGAGAGAGAAGTTAGAG
TTAGTAATACATCCCTTCCAGTATCATATTACGAGCCTGTAACGAACACT
GATCAACAACCCACATGCCAATTGCCTTACGGAGCAGCCGATAATGTTCA
TGACAAAGAACTTTGCGACTCTGGAAAGGTTGTTGTGAAGAAACCCCTTG
TAAGTCTTCTCGACCGGAAATGTAATATAGAAGCGTATATAGTATCGTTT
ATTTGTGAACACAATTTACCACTCTCGGTTGCTCCTCACTTAACACAATT
ATGCAAAGACTTGAGTGTAGATTCAAAAGCTCTGAATGCAGTAAATATCA
GTGCGACTTCAGCAACTTACAAGATTGTGGATGGTCTTGGTGTTCATAAA
AGAAGACAAATAATCAGTAATCTACGAAAATCACCTTTTTCCATTAACAT
TGATGAATGCACCGCATCAAGTGGTATGAAAGTCTTTACAATTCTTGTCT
CATATTTTGATGAATCGATTGGTGAATGTGTTGTAGAACATTATTGCTCT
TTCGAATGTATCAAAACCAATGCTGTAGAGTTGTTCGAAGGAATCTGTGA
TGTATTTGCCAAAGACCAAATTCCATTTGATAATCTGATTTCCGACCTCA
GTGATTCAGCAGCTTACATGCGTGGTGTAAAAAGTGGAATCGAGAAAAGG
TATGTCTTATGAAGGTGCATGTCTTATGAAGGTGTATGGTTTCGTCTTGT
CTTAGTTTATTGATAATTTTCCTCTCGGttgtttgaagaaaaagttaATC
ACGTCATTTTCGAGTAATTTATCTTATATGGCTAATCATTCAACTCTATT
CAATACAGTATTTGTTTTAGACTATGCTTCATGTTTCATCTTTTTAGGCT
CCGTGATAAGGCCCTGCATTTGCTTGATATTGACGGAGATTTATGCCACA
AAGTTCACAATGCTGTTAAAGTGTTTTGCAAACCCTTCAAACAACACATT
GAAAGTTTATGGCGTGATATTCACAATGACGTCAAGTTCAGTGCGGATAT
TAAGCAAGCTCTCCAACATATTTGTCTTATCATTGGTTCTGAATACCACA
AGCCTAGCGAACCAGTTGCACATCGGTGGTTATCATCATATAATTCAACA
ACCCAAAATTATCCTATGTTTAGTGCACTCTGGTTGTTGTATTTCAGTTG
GATGACCAAAGAAGATCGCCTTCTTTACAAAGATGAGAAAGAACTACTCA
CAGTTGATGCCAGCAAGGAAGGCAAACAAAATATCATTGAAATTCAAAGC
ACAATGCGAAAGAAAGGTCTAACTAAAAAAGGCAAGGAACGAAAACAACG
CATCTTTGGAAAATTGATACATAGATGTGACATGACTAAGCTTGTGGCTG
AATTCTATCAAGCAGTGCTTCCTTTGTTCAAATCTTTTGTCCTGATCTTT
CAACAGAAGTCACCACAAGTGCATAGACTTCATAGCAGTATTTCCTCTGT
CACTCGCGAATTCTTTGCATGTTTCATGGAGCACAGCACTATCAAAGGTA
TATCTATTCTTTTCCAAAATGGTTGATATCCTTAAAATGCATATCTCTAA
CTTCTTTTGACCCGGATATCTAAATGATTTGATTTCACCAGTAAGATATT
TTGGCAAATCAGTCTGTTTAAAGCTACTTTTAAGGGTTAGAAATTAAAGA
ATTGTGTTTAGGATTTGATTTCATGACATTCCCTAAAGAAAATGAATCGA
ATTCTTTTTAAAGGTCTCACCGGGTCAAAGCTTCAGAAAGTTGACGTGAA
GGGAAATTTACGAAAAAGCAAGCACATCTATACAGGCACAATGACGAGAA
CGCTCggtaagaaattaaaagaagaaaaaaagattgagACTCTCAACGAA
TTCAAAGCATGTGTTAAGGAAGCCTACGTTGAAACAGCAATGTACATACA
GAAGAACTTTCCATTATCTAATCGTGTTTTACAATGCTTGGCTGGGCTTG
ATCCTAACCACATCGTATCTGGAAAGTCTTACATTCACCTTAAAACCCTT
TCCGACTTCTTTCCCACAATCCTTGGCAGCGAAGAAGATCGAGAATTGTA
TCTAAATGAAGTTTCCCGCATTCAATTGGACGATGGTCTTCCATCAACTA
CCAACGAAGCAGGAAAAGATATTCGTCTTGATCATTGGTGGAACAAGGTT
TTTTTAACCAAGAAATACCCTGTTTTATCGAAAGTAGTGAAAGCTTGTCT
GTCAATTTTTACCGGCCCTCAAGTGGAGTCATCTTTCAGCAAAATGAATG
ACATCATCGACCGCAAATCAAACCGCATGAATGTGGAAACTTACGATGGT
ATCATGACCGTAAAATACAGCTTACAGTCGAAATCTTCCTCTGAAATTTA
CCATCGCAAAGACCCCTTGTATGATCCCATCAACTCAAACGCCGTTTATT
TTGTTCGCACTGCAAACGCAAGATATAAAACTCGAATCgccaaaaaacgt
aaagagaAGAGTGATTCCAATAAAGCTTTAGGGGCAAaggtaaaattaaa
tttcaacaaGCGGCAACTGACAGTGACTTTATCTACAGTACAGCATGACA
GTATGACTAACTGATTACCGACTGACATTTTACTGAATCGATGAATATGT
TGAATAAGGAGATGACTACAATTAATAATTGTTAAGAATGACGTgatcaa
aactttcaatttttctctgtactgttttgcttattttgaatgaGTTATTG
TTTCATATTAGAAAATTCCAGTTGAAAGGAAGAAGCAAAGCGTGCACAAA
GTTGTTGAAACCATTCGGGAAGAAATTTGTGAAAAGGTTAAGAAATCCAT
GAgatcgaaaacaaagaaaagtTCCACTGTAACAGCAGAATCTGTTTCAA
ATCCGAAAGAAACCGAGCTAGAAGTTtgccaacaaaaacaaaagattaaC
CCTGGAAACAAATCTTCCCCTCAAAAGcagcaaaaacaaactttagtcTC
TAGCTATTTCAAGTCCTTTTAAATCCAATTGCTTGTTCTTTATCCGCAAC
GAGGAtcgtattttgttttgttcactCCATTTAAAATGTCTACGACAGGG
CTGATTAGTTTCatagtttttttgtttacttaaatGCTAAACCGAAAAGT
CTATCGCAAGTTGACAGTTTGAAATTATATAGGATGACGTTGCAGCCTCG
TTTTTATCTTAACATTTCTATCAAATTGAGCATCTTCAAGTTTTGTATAT
ACGCAATATGACGTTCATATCtacttttatattttgttttctattcattt
tacAGCGATTTAAGACATATTTTCGCTGTATGAAATTGTATAGGATGACG
TTGCAGCCTCGTTTTCATCTTAACATTTctatcaaagttttaaaaattta
tatatacCTTGTATATACATAGTATAACGTTCATGTTTCAGCCTATTTTC
GCTGTATAATaggcattttaagaacattctgagTTGTTTTAATTAACGAA
TTTTAGTGccattttagccaatctaggggGTAAAAGATCTGAAAAATTTC
TGGCcctcggccccaaccatggtggggcctgcgGGTGTCACTATATAACA
AAATATCTCTGTTAGGAaattttccgtctcacagaaaaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040959TCONS_00040959Clytia hemisphaericatranscript
TCONS_00040960TCONS_00040960Clytia hemisphaericatranscript
TCONS_00040961TCONS_00040961Clytia hemisphaericatranscript
TCONS_00040962TCONS_00040962Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040959-proteinTCONS_00040959-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002645supercontigsc0002645:3233..7423 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.33	0.31	0.45	0.28	1.49	1.22	1.37	1.56	0.69	2.07	0.66	1.21	1	1.37	0.73	0.58	0.71	0.48	1.22	1.43	1.6	1.71	0.39	0.68	2.42	1.95	0.45	0.37	0.51	0.66