XLOC_024968 (gene) - C. hemisphaerica

Overview
NameXLOC_024968
Unique NameXLOC_024968
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002623:15744..20052+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024968 ID=XLOC_024968|Name=XLOC_024968|organism=Clytia hemisphaerica|type=gene|length=4309bp|location=Sequence derived from alignment at sc0002623:15744..20052+ (Clytia hemisphaerica)
agccATTTGACACGTCTTCAAGAGGAAATCAAACAACAAGCATGGGAGAT
GGTGCTACAGAGTATGTTGACCTTGTTTTTAGAGATTTAGATAAAGTTAT
GATAGGACACAACATTATACAATGTGTTTATGTTCATTCATACTTACTAg
ctcattcaattgttatttagATGTTACAATACACATGAATTCTCTTCCAA
TGATTCTTGATCCAGAAGGTATGGATATTGAACTACGAAAGAGTCATCTA
AATACAGTCAAGGTAATGATAATTAGATTTCAAGGCATAAAGTACTTTTA
GAGACATTCTATAGTTAACACAAAAAGCGGTTGTTTGAAGAAGAATAAGT
GAataaaaagacaatttaaattTTGCTTTATAAACATACATTAATTTCTG
GCTGAGGCTCATTATGCTTAGAAAATCTTCATGTAGCGCCAGTACTAATA
TGTTGAACAGTGAAAAAGGATGCGgcttattatattttgattttcccCTA
CATGTTTCGGcctcggtccgttctcaagggaatcCACTCAACTAATACAA
AGGAGTACAGTATTTTATTTAAAGCtattgtaattttcaaaatattcgtt
GTCTTCCTGTATAATTGATccctttttcaaaacaaatcatgAATCACCAC
AATTTAtttgcattttattttatttgacttGATTCTCTTTAGAATTTCAG
AtggaaatttatattttgacgCAATTGATTGAGGAATTTGAAAGTGAAGC
TGCGAAACCTGACATGAATACCGATATTACAAAGGTGATTTTTCTCTTTG
TTCTCAACTTCAATGTGtgtattaattatttttgaggtTCTGTACATTCT
TTAGTACCTTTCGCTTTTGACCAAATGAGATTAAAATCTTAAAACTCTGT
AAATGtgtaatattttaaaagatGATGTGGGTGCCCGTAGGGTCAATATA
ATATACATGGTGATGTTTTTTCATattatttgatttgtttttttgtttgt
ttggggGGCATTGTTTGCATGTAAACAATAACCTCTATTTAATCTCTTTA
GGAAATtgcttttaaaaatgttcaaacCAATCAGATTTTACTCTTTACTT
TAGAGAGGTAAAGGATCTAAGAAGAAGTCGCATCAATCATGGGACTGGTC
CAAAGAGAGGAATCAGGTGTTGAGTGTTATCAACCAATTTTTGCAACTTG
AACTCCAAAGATTGTGGGATCCACCCATTGTAGAAGAAGAATTCGCCAAG
TAatttgtttttcactttttcttctaCATGTCctttttgatttcatatct
taaGGTTTCGTTTAAAGAAAAGTTTTATGCTATAAGGCTCTGTAATGACA
CAGCGATTATCTGCTTATTAAAAAGTTTATTAACATATGATTACAAAGTT
GTATAGTTTATATAGTTGGACATAAAATATTGATGTTGAATATCCGGAAT
ACCTTCttctaatttctttttcagtttgTTCAGTTCCGTATGTTACAAAA
TACTGGAAAATCCTGTCGTGGTTcgtcaaaaagaagataaaGAATTGGTG
ATCAACATCCTCGGCCAGCTCATCAAACGATATAAACATCAACTAGGTTA
GAGACAACATTAATTGTGCATCCAGTACATCTATTTTAGGACATTTCGTC
TACTTCCTACCAGAGTAGGATGatgttcatttttcatttttcactttctc
cAGTGTTCCTCAAGTACATTTTGGACATTATTTAAGTGCTGATTCCAAAA
ATTATGCTTATTTTGGGCTCGAATTTAATATAGATCATTTTACCTTTTGC
ACTGAATGCAATACTCTTGAACATTTGAACCATTTTTAACAAATAGTGGT
TTTTACAAACGTTATGTATGAAAGAGCAAGGGCATTAATCGATAATGCAA
TACCTTAGTATTTACCTTTTATTTTCACGCCTTTAGGATATTCTTTAATT
TTTGTGCATCTTGTAATTtctgggaaatttttttaagtgtttttgatGAG
AAACGTAGTTAAAGAGGGCAAAAAACTATGAAATCAGGAGTTTTGCTCAC
TTTTAGTTTGCATTTTAACCATTTCTTACATCCCAGGCATATATTTAAGG
TAAATTCGCTGGATTCTAGGATTTGGATTCAAAGATTCAGATTCGGATTC
AGGATTCgaaaaaagctttgtaaaaaaaattgaaagaagatattgacttc
aaaccaaaagatcttgaaagattacATAACATAAAGCAAATCTTAAGAAA
AACCGTTATCAATACGGGCAAGGCCTTGATGCTAATTTGGGAATTTCccc
tttttaggattcaaattgCCAGCATATTGCACACTTTGACTGGTTCCCAG
TCCCCTCATTGTATTCGGATCAAATTTTAGACACCGGATCTTATGGACTA
GGTGTTCTAGAAACTTGGGAAATCAATTTTTAACGATCCCAAACCAAAAA
CGAATGCAAGGTTACATGAATTCACTAAATTTTTATATtgcaaaagtctt
tttttttctgcTAAGTTTACGAAGATcacaaattgtaaaaaaaactccct
ttctctgtttttttttcaagttcttgGAATTATTTATAGCACCAGAAATG
GTATGAACAATGTATAAACAAATTGAAACCAAAAAAAGACGCTTGAATCC
CAATCCTGCAATCCAGCGAATCTATGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGCCCGTtttggaagattcttcctctttggg
aagttgaaaattgactgaatcttggcgaagctgtacgatgaccggcgaaa
gttgaaactttttggaggtgaagaatcatcaaattttaaggtttttcacc
gaaagaaaagttgactttaccgtagaaatcttgttaaattgtgaaaaaac
tgcgtaaacttcccaaacgggaagttCCAACCCGATCGAGTTTTCCTTAG
TTCCTCGTTTCTTCCCGATCTGGAAGTCCGTTAACCCGTTTGGGTGTTaa
gttaatttcccgttcgggaagattcttcccattacggaagaatcttccaa
ttttggaagaatcttcccgatcgagttagtggcacagactgctAGGTGTT
CTAGAAACTTAGGAAATCAATTTTTAACGATCCCAAACCAAAAACGAATG
CAAGGTTACATGAATTCACTAAATTTTTATATtgcaaaagtctttttttt
tctgcTAAGTTTACGAAGATcacaaattgtaaaaaaaactccctttctct
gtttttttttcaagttcttgGAATTATTTATAGCACCAGAAATGGTATGA
ACAATGTATAAACAAATTGAAACCAAAAAAAGACGCTTGAATCCCAATCC
TGCAATCCAGCGAATCTATGGCTTACCCTAATTAGAGGACTCGTTTCTTA
AAAAGAGCGCTAAGATGCATTCCAACACATAATAATCACTAATTCACGCA
CACTTCGCACAGCCTAGTGAGCAAAAATTAATGGGATTAAGGTAACATTT
TAAGCCATTTTGATTTCAGGTGCCAGTATGAAAATGATTCAGCTGCTGCA
ACATTTCGAGCATCTGGTGTCGCCTCTTGCACAAGCTATCACCACTTTCG
TCACTGATTTTGGAGCCAAAAACCTTGTCAGTGATGTCATTAGGTAGGGT
TTATTACACAAAGGCACCGGAcgaatattttattttgttgttgttcttAC
TTactattctttgtatttttatgtACTTTTTTCTTAGGGAGATTGGTCGA
ATGGAATCGTCGGACTTATCACGTGATACGAGTGGCACGCGAGCTTTCTC
ACAGTTCTTGGTAGAATTAGCTGATAAAATACCAAACCAAGTGCTCCCAA
ACATCAGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040913TCONS_00040913Clytia hemisphaericatranscript
TCONS_00040914TCONS_00040914Clytia hemisphaericatranscript
TCONS_00040915TCONS_00040915Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040913-proteinTCONS_00040913-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002623supercontigsc0002623:15744..20052 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.39	8.3	4.21	2.83	27.62	26.74	18.91	33.09	18.64	19.09	12.02	15.13	7.72	5.9	5.42	6.16	9.17	8.72	2.63	3.1	4.46	5.09	6.62	9.19	15.89	21.61	4.47	0.92	5.61	7.02