XLOC_024745 (gene) - C. hemisphaerica

Overview
NameXLOC_024745
Unique NameXLOC_024745
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002504:16486..19930+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024745 ID=XLOC_024745|Name=XLOC_024745|organism=Clytia hemisphaerica|type=gene|length=3445bp|location=Sequence derived from alignment at sc0002504:16486..19930+ (Clytia hemisphaerica)
aaaactattcaggaacttagacctttttacagaatttcaaaaaatctgtt agttctggagatatattgaaaagtttagacatgggtagtttgcgtttgtg tttcgcgttcccaaaccaaacgcacgtgtgtgatagattgtagcctaatc ttaccctgggtttactaaaaaaaccgcgattgagaagatgaaccagctca atagcgacagccatttgtttcaatgtgggtcgagaattttccggtgccgt ggtcagcgctaaatcgcgttttcaccttgacgtcgaaaaacatgaatatt tttggaaagaaaatagataccttgatgcagttttttttacttgtttccct gataattcttgattgatttaaaaaaaaagaatgaccgatttggatgattt aaaggtaagtactaatgcattgaagttcatttttgtaaattcttcctcgt tccgcgcaaaaaatcccgacgagtgcgcacgcTATCTGTGACCTGACTGT GTGCATGTCTGGTGGGTATTATATATTTCATTTgtgaataaaatttgaaa aatgttttggttcaacctccttaaataaaaaaatacaccAACAACTTACA ATTTAAAAGCTCTTGAGTCTCTTTGCTGACAGAACATTTTGCAGAATTGA ACATTGCTCCATTTTTGGCCGCCATCTTGATTTCCGATGCTGTGATTTGT TTTCGAAtttcggaaaatcgggaaatgtAGTACACTCTGTATTTTGCCGA ACGAGttcaattttgatattttgcgcCGGTAAATATCGGTCATGCTATAT AATGCTTCGATAAAGATGGTAGAGTAAGCTACATTCATCCTTTTACATCC AACAGCCGAAGGCAAAGGTAAGCTCTAAGACCACGAAGGCAATATCTATC TATATCTTGGTCATCCGACCACTACATCAAGTAATTTTTGAATCCAAACG CGATGATGACAACACAGGTATTGATAGTTCCTGAATTTCAGTGACGAAAT ACCCCTTGGCTGTCTGAGCATTCATTTTAATTCTTTGGAATAAGGAGTAG CTGTTGATTTTTGTGtcattgatttttctaaaaactgCTGATACTATCAT TTAGTTATCACAGTCATTCATTGAACTGGTGAAGGAAGAAAGCACTACAT CATTGGTGACGGACTTCACAGTTTATGAAAATATGACGTTTTTAGTAAAT ATGGTTGGAATACTATTAACGTATcatattttctttaaagacAACCTAAG GTTTCAACATGGTTAGAATCAGCGTGTTAAATGACTGCCTTAAAAGCATG GTCAATGCTGAACGAAGAGGAAAACGACAAGTCTTAATCAGACCAGCATC AAAAGTTGTCATGAAATTCTTAACTGTCATGATGAAACATGGTAAGCTGA GTTTTTATACTGAGGCAAAAATAACAAATATAGTGTTTCTGGTAATTGAC CGGGTGAACAAAAGATATTTTCTGACCCAGCCGCAGATCAAGTTTTGATC GTAAGTAGTtcatacattagtattcagggcttactttatactgtttgtac ataaaagatCTTTGAAGtttatttcaatgatcttaaaaaCAGCATAGAAA ATGTTTTCTGGCCGGTTGCATGACAGCTTTGTTCCTTCACCCACATTTTG GAAacactacacttttttattttcgcctgatTAACTTTTTTTACATTGAC TTTAGTTACATACTTTCTTATGATGAATTTAGCATATTCTGACACCTCTT GTCCGAGGCTTTTTGCCAGTGAACAGAACCAGCTACTTATGCCTGAGGAA AGTGATATTGCTTTTATATTTGACTCCAGTAACTAAATAAATACAGCTTG TTTGGCCTGTAGATTCGTCCTGtgttaggggtcactcacaaatcgaGTTA AGGTTAGAAAAACGCCAATTGACGTTAGTGGGTGGTTAGATTAAAGGTTG TTTTAAATCAAGAACATCAATTTTTATTCTTGTCGTGTTTCTGTTTAATC GCTTTGtctgttttgaaaaccaaaacaaacagcccTATGTTcatgtcttt tctttgtttgacgACCCAAACGGCCCTTGAATCTAACCTAAAATAGATTT GTGATTGACCCCTTATCCCATCATATTTACCATTGATATTTTGAAGTTAG CAGCTTTTGTGGCTAATTGCATTTAAGGCCAGTTTCAACTTGCATGTGCT GTGATTGCACCTCTTGGATTGCTCCTTTTCGTTTGGAAAAATGATTTTAG CATAAATGGATccataaaaaattaaatttccaatTGATATGTTAGATCTC GTCAAtgagattgttttgtttttcttttgacccATAGTGTGGAAACTGTA CTCAAAAAGTGTGATAAAGTTCTAGTTATATATTTGCATAAGACATAAAA TACCTGATCTCGCAAATTCTATGTAAAATTTACAGGGCACATAAGTGGAG ACTGGTCTTAAGTGATGGCTATCTGCAATTCAAGAGGGCTAATGCCAAAT TATTTCTCAAACCTAccttaaaagtttttgtttaacACATTTTTGTTCTC TACTTTTTTTGTCACTAGTAATGTAAATGTAACAAAGTCTTTCTTTTTAT AGAGGATCAGTAGTGATGACTTGCACTGGGTTATGAATTGAATGATTCGC TCAAGCATGACTGAACTGATCTAAACAAATCTAGTTTTGCAATCAATGGA TCCTTTCCATTTATAAAatgtaatttgaaatttgttcttttttcaattaG GATACATTGGCGAATTTGAATACATTGATGACCACAGAGCTGGAAAGATT GTTGTCAACCTTAATGGAAGAATTAACAAGGTATCTTGAGAAAACTTGTA AATTTCATGTAAACTAAATTTCAATGATGACCTACAAGTAAAAGACTAGA GTCTCAGAAAATCATGTTGAGACGTCCTTGCACAACTGACGAAATTGATC AGCTTTAAATGCACATAGTTAGCTACAGTAGGTGAACAGTCTtataaaac aatatttttccatttcacAGTGTGGTGTTATTTCCCCACGATTTGATGTC AAATTGAAGGATATTGAAAAATGGTCTAGTTACTTGTTGCCATCTCGTCA GTTTGGGTAAGTCTTGTTGCTTTCACAATTCCTCCTggttttgaattgat tttttaattaaatgcTAAGCACAATGATGAAATGGGTAAATGCCAGTTCT GCTGCTGATACGTGATGTGGAACTTACCCTCAATATCTGAGTAGCTTTAG AACTTTCATGCCTAATAAAATATACATTTTGACATATTTTAACCTTGTCT CTCTTTCTTAACAGATTTATCGTAATGACCACATCAGCTGGAATCATGGA TCATGAGGAAGCCAGGAGGAAAAACACTGGTGGAAAAATTTTAGGATATT TCTACTAGAAGaattctgaaaaataaagatcattttgttgttgtt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040634TCONS_00040634Clytia hemisphaericatranscript
TCONS_00040635TCONS_00040635Clytia hemisphaericatranscript
TCONS_00040636TCONS_00040636Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040636-proteinTCONS_00040636-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002504supercontigsc0002504:16486..19930 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RPS15A40S ribosomal protein S15a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
773.31 757.63 813.71 852.04 786.91 606.39 823.7 883.98 1304.89 1054.76 1236.99 1511.6 2003.69 1716.47 1937.11 2077.32 1923.74 2178.37 939.41 1131.85 2055.87 1923.8 1772.92 1553.63 1132.18 1174.11 1879.97 1888.4 1355.92 1615.39