XLOC_024694 (gene) - C. hemisphaerica

Overview
NameXLOC_024694
Unique NameXLOC_024694
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002478:988..5835-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024694 ID=XLOC_024694|Name=XLOC_024694|organism=Clytia hemisphaerica|type=gene|length=4848bp|location=Sequence derived from alignment at sc0002478:988..5835- (Clytia hemisphaerica)
AGCGAAGTTTCCAGCGATTGAAAAAAGCTGGAAAAGCAGATTCTCGTGCA TTTTCGCACGCTAATTACTTTTGCATGCGCATCATTACGTCATAATGGGA GCATGCGCTGTGAAAACGTTTTAAATAAGGCGTTTGAATTACAAACATCC TCGCTGCATTCACTCATCAAACTAAGCGTACTGTGTATGTGTGTGTGAGA AAGAAATTCTTTTTAAAAAATGTCTAAAAAACCAAGTGAAAAATCAAAAT CTACTGATGGTGGAACTACTTCTGGAAATGAAACACTAACTGTTACTTAC GAGCAGTTGAGAACTCTGGTTAACGATGTTGTTGAAAAAGACTTTGGCCC ACAAATCATGAAAAGCACCAAAGACACAGTGAAAGCTGCTTCTGTGCAAT CTGCTGAGAATCATTCGACCAATCTGGCTAAGCTCAAAAAGAAACTCGAA AGGAAGAGAGCCAACGACAACATCGTACTCAAGAAAACCGGCCATCAAGA TCAATTTGCTCATAATACAGCAGTCTTGGAAACGATTGAGGATACCCTCG AATTCATGGAAGAGACGGATGTTGATGGGATGAAAGAAGCTTTAAATAAA GGTAAGAGATTACTAGAGACTCGTATTCAACATATTAGAATCGCCGACAC ACACGGGTGGCTTACTGTCAACGAATTTAAGACAAGCGATCTTACCTCCG GAGACGTGGAAGAAAAAAGGCTTAAGAGGGCTATTAAAAACGCAGAGCAA GTTAAACAACGTATTTATAAAAAGCCAAGAATAGAGGAACCTAATAGAGA ATACTCCAAGGCAATCAAATCTAGAACTGAACAAAGGAGCCGTATGGATG AGGTGGTATGTTATTCATGCAAAAGAGTAGGACACTACGTCAGCCACTGT CCTTTTCCTGCATCTTCGTCACCTTTGGCCTACTCGACAAAATTAATGTC CTCATCAACAGCAACAAAAAGTTCATCGTCCAATTCAAATTCTAAATCGT CAAGGGATGGAAAATAACTTTAACAAAAAATATAAAATTTCAGAACATTC TTTTTCAACTTTTGAAATACAGTAGCTATTTTACATTGCGTTAGTTTTTA AAAATTGATTACAATTTTGTCTTGTTGTAATTAGATTAGTATTGATCTGA GCTCATAATATAAATGATCTAACTTCTCTCCTTCGTTTCGCTAAATTACC TCAATTATATATAAATTGTTTTGATTCCTCCACTTTGATTTATACAGAAA ACGTTTCGTTTTACTTAATTAATTTTCTTTGAAAGACTGTTAAGCCATTT GTGCTTTCTTTTCATTGCATCACATTTTCGTTTGATACCACTACAGACCG ATTTTGGGAATTCGAACAATCTGCTGAAAGTATCTCCGTCGCCGGAAAGA TTCAAAAATTTTCAGAATTTTGGGAAAAAGACTTGAAAGCATCCAACTTC GCCTTGAATATCGTACACGAAGGATACAAAATACCTTTCGAGTCAGAACC ACCAAAATTTTTCGCAAAAAACAACGCTTCCAGTCTAAAAAATCGAACTT TCGTTACGGATAGTATCACACAACTTTTAAAGGACGATTGCATCAAAAAA GTCGACGAACCGCCTCATTGTGTTAATCCTTTGACTGTTGCAGAAGGAAA CTCAAAACTAAGACTCGTTCTGGACCTTAGACACGTCAACAGATATATCA AGCCAAAAAAGTTCAAGTACGAAAACTTAAAACAGGTTTCAGAACTCACG AACAAAAACGACTTTTTAATTACTTTCGATCTTAAGAGTGGGTATCATCA CGTTCCAATCAATCCAGATTTTCAAACTTTTTTGGGATTCGCCTGGGACA TCGACGGCAAAAGACAGTATTTCGTATTCAAAGTCTTACCATTTGGGCTC AATATAGCATGCCTAGTGTTTACAAAGCTTATGCGACAGCTTGTTAAAAG ATGGCGCTCTATGGGAATCAAATGTGCAATGTATCTCGATGATGGTATAA TTGGGAATAATTCTTATAATTCCCTGATTACAATGAGAGATCTAGTGCTA AACGACCTACAATCTGCAGGGCTGACCGTTAACTTTACAAAGTCGAGTCT AGTACCCGGGCGTACAAAAACTTGGTTGGGTTTTGAAATAAATACAGTCG ATATGAACTTTGAAGTGCCAGCATCAAAAATTCAAAAACTTTTGAAATTA ATTTCACAAGCATTAGAAAACGAATTTCTATCAGCAAGAGAAGTTTCCAG AATCGCAGGCAACCTTATTTCCATGGCAATCGCAATAGGCCCGCTTGTCT ATTTGCTTACAAAACAAATGTACAAATTCATAGCTTCAAGTTTCTCTTGG GATAAAAGGCGATTAATAAATTTTGACGTTATTCAAGAACTTCAATTTTG GCAAACCAATTTAAAAAACGTAAAAGCTTTTAGAATTAAAACCAAACCAG AAATTACGAAGATCATCTTTTCGGATGCAAGTGGTACCGGCTATGGAGGT TACGTGGTAGAAAAGTTAGGAAACATCATAGCAAAAGGAAATTTTTGTAA ACAAGAAATACAAACTAGCTCAACTTTTCGTGAACTTCTTGCAGTTAAAT ATATTTTGATGTCCTTTCCTAAACTTCTCGAAAACGAAATAATTGAGTGG TTCACGGACAACGATAATATTTGTAAAATAATCAGCCGCGGTAGTACAAG ACAACACCTACAAAATCTTGCAATAGAAATTTTCAACCTCTGCTTATCCC ATAACGTCGAAATTTACCCTACTTGGATACCAAGGGACATGAATAAAACA GCAGATTTAATTTCCAAATCTATGGACACAGATAATTGGTCTATCGATAA TGAGACTTTTAATCACATAATCAAAAACTATGGACAAATTACTATAGATC GATTTTCCGATAACCAAAACGCTAAGTCAACTGTTTTTAATTCTCGTGAG TATTGTCCAGGAACATCCGCCGTCAACGCTTTTTCCTGTAATTGGGGAAA CAATGAGTTCAACTGGCTTTGTCCTCCAATATCCCTCGTGGGTAAGACAA TTCAGCATCTGAAAAATTGTAGAGGTAAAGGCATATTACTTGTTCCATTG TGGCCTTCTTCTTACTACTGGCCATTGCTGACATCGAACGGCAAAGAATT CGAAGTTTTTGTGAAAATGTTTTTAGTACTCGACCCTTATTATATCAATT ATTCTAACACAAAATGTATATTTGACGGATTTGCAGGCTTCTATTCTGTA GCATTATATATCGATATGTCCCAATAAATATTCAGTATTATTAAATTCCT AGTTATATCTCACTATTACCCCATCTAACACACTCATTTTTCATTCTTTT TATGTTGACAAACTTGGTTACATTTGCAAGATTTATTACATCACGATCAA CGTTACACGTGGTGTGTTTTATGTGCCAATGCCTCTGTGCAAACACGTCT TTCGCGTCAATGTCTCTGTACAAACGTATTTGAGGAGTTCGTTCTCCATC TTGAAGCCCATCGTCTTACAGATGGCAAAGTGCAAAGGTACGAAATTAAC TTTTTTTATTTATTTCATTTTTCGACAGATCATGCCCCCCCCAAGTTTGA AAGAAAAACTCGCAACAATTAGGAACGAAAGTTTGAAACAAAAAGCCGAA GGTCTTCCCGTTTTATTAGAATCAGCTTACGCCAAATCCACTTTGAGGAA GTACAAACCTGCTTGGGAAAAATGGGTGTCTTGGGCTGGTCCATTCGACG AGGTAAACTGTTGTCCTGCCGACCCTTTTTACGTAGCGGTATATCTAAAC GATCTTACGAATTCACTTGCAACCGAAGGAACATTGACCGCAGCTATTCT AGGAATCAGATGGGGGCACTTAACCTCAGGATTTGAATCTCCGACCGATC ATTCCCTTGTTAAATTAGCACTAGAAGGAGGTAAGAGAATAATAGCTGAG AAAAATTCTATTGGAGGGAAAAGACGCAGAAAAGAACCCTTATCATCAGA CATTATCAAAAGTCTAGCGGAAACATACGCCACATCAAGTAATCTTTTGG ATATTCGTTTTACTCTAATGGTTATATTAGGATTTGCAGGTTTTTTCAGA ATCAGCGAAATGCTAAGGATTCAGACCAAAGATTCAACTTTCGATCAAAC GGGCGCAACTATTTTTCTACCCATATCGAAAACCGATCAACAACGCCAAG GTAATCTCGTCTTTATCAGTAGAACAAAATCCAAATCCTGCCCAATCCAC TGGCTCCGTAAATATTTATCACTTTCCGGGCTGAGATTCAAATCAGAAGC TTACTTATTTTGTCGCCTTTACAAAACGAAATCTGGTCATAATGCACATG GTCATCTCCCCATATCGTACTCCACAGCCTTATCATCGTTCAAAACCAAC CTCTCAAAAATTACGGATTCGGCAAAATACGGTTTACATTCCCTCCGATC AGGGGGTGCTACAGAAGCCGCAAATAACGGAGTTTCTGATAGGCTTATCT CCAAACATGGTCGATGGTCCTCAAACACAAGTCGAAATATTTATATTAAA GACAAAACTGAAATCCGATTCAAAATTTCTCAATCATTGGGAATTTAGCT TTAAAATTTTTATTTTTTTTTTTTTGCTACTATCATGTTCAACTCATAAT TTTTTCTTTTTTATCTCTCGTGTTATTGCAGACAAATACCAAACAAAAAG TAGCTATTATTGTGATTTATTGTTTGTTTATTCGAAAAGGAGAAATAGCC GAGAAGCGAAGTTTCCAGCGATTGAAAAAAGCTGGAAAAGCAGATTCTCG TGCATTTTCGCACGCTAATTACTTTTGCATGCGTATCATTACGTCATN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040575TCONS_00040575Clytia hemisphaericatranscript
TCONS_00040574TCONS_00040574Clytia hemisphaericatranscript
TCONS_00040573TCONS_00040573Clytia hemisphaericatranscript
TCONS_00040572TCONS_00040572Clytia hemisphaericatranscript
TCONS_00040571TCONS_00040571Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040574-proteinTCONS_00040574-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002478supercontigsc0002478:988..5835 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.21 5.95 3.89 2.15 3.48 2.83 4.41 5.22 13.01 11.41 13.22 11.83 8.43 6.17 3.62 4.98 1.96 2.78 0.69 1.11 2.06 1.19 3.49 4.73 7.7 11.69 33.01 25.02 2.95 3.36