XLOC_024349 (gene) - C. hemisphaerica

Overview
NameXLOC_024349
Unique NameXLOC_024349
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002328:6783..10823+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024349 ID=XLOC_024349|Name=XLOC_024349|organism=Clytia hemisphaerica|type=gene|length=4041bp|location=Sequence derived from alignment at sc0002328:6783..10823+ (Clytia hemisphaerica)
Nggggtagcaaaaaatcatcaaaatttgctctgtccgggggtaatttggg
gtgtccgggggtcagcagatgcttgtccggggggtaaaacctattgtccg
gggggcaaaagtcaccctgttcagggggtaaatcactaacaATTGTTATG
TCCTCCacccccccatgtacaattgtttttttctggaagagcccattttt
gaactttggttCGCATAAAGCTCCATAGCTTTATATCGCAAACCCAATAA
CCCAGAGGCCCTTGAATGATGGTATCCGGTAAGTATTATTTATACCGCCT
CTTATTTAACATTCTCATTACATGATGTTACAATCCGATCGAGATTTATC
GATTCGCAAATGCAATCGACGAAATTCATACAACTTTTGATCACTACTTA
ACGACAACACAACATCATTGTTCATATCTTTCATCTCCAAAATCTGACTC
TTCTTCAATTTGTGCgtcttcaaaatttctttaattaaCTTTTTGACATT
CTTACATGCCAGATCACTTTCAATGATTTCGTAAAATACAGTTACCTCTC
CAGTATTCACAAATGTGAGCTGTATCACGACACGCTGCCTCATCAAGATT
TTATCATCTTCTTTAAGATTATACTCTGCAAGAGTGTGGCCGTCTTCTAA
CTGTCGGACATCTTTGGAGCTACACAAATCAATAAAACAATAATTCTCCT
CATTCTTTGCCTGTCCAATAGCCTCCGCCACCCTGTTTTTAAGGACAATG
ACCTCGTCATTATCGCTTACTTTCATGGTGAACGAAGAGCCAAAAGAAGT
AGAAAGAGCTTCAAAGTTTACTCTAGGTTTTACGATCCATATGTCGAACG
GTTTCTTTTCCATTGCCAAATTGGGTATTATTTGAACCAAGTGTTGTTTT
TTGGTTTTATGATATGACGGAAAGATGATGTCCCCAATAGTGTTTTTTAG
CGTCTTTTTTGAATATGTTTTGTTACTTCTCTTTACTTGTgtattttgtg
tatttttttctAATATGCACTTTTTATACAATAAGAATATTCTTGGATAT
gctaagtcaagattacgtcattgtTTCATATCGGAAACACCTCCAAAACa
ctggaatttgacccctgagtattactaaaaatagcaACACAGGAGTCAAA
TTCcgatttttcgggtgtttccgatatgaaaaatgacgtaatcttgtcTT
ACACATCTCAAGAAAAGGAGAAACTCTACAGTTGCCGTTACTTCTAATAA
ATGCCATCTACTTTTAAAATGCCCCAATCTCGAAAAAATAACCctctttt
gggaaatttttttcaataaatgccCCGTGATTGTAATCTTTTAGTATTTA
AACTGGTTTCGACCCGTTTCTACAACTCTAAGTTAACATATTTGTACTCA
AACTTTGTACGTAATGAAAAGACAGAGCAAGGTTTCAATTAACTTTATCA
GAGTAGCGACTTTGGTtagaaattatttaataaacaaCCCCTTCTTGTAA
ACGCCCttcctaaaaacaaaaaaattaataaataaaacgCCCGAGCATTT
ATTTGAAGTAACACGGTAAACTATAAAGGAGCCATCAAAACTAACTCACG
CATAGCACGCTCAAAAACTCTTTACATACACACTACAATCAtgcattctt
ttaaaaattttcaacacaTGAAATGCTATCATATAAAGGATATTATCGCA
TTACATTTTTGCTAGACAAAAATCTGTCTAGTTTTGTCATAATAATCTTT
CCATCTCTCATTTTTAAAACAGTTGTAAATAGGGAGagcgaaaaagtcaa
aataaaattgtgacgGAGAACACTGTTGGTAAACCACAGGAATATAAAGt
taataaaccagccgaggctggaaggtcagccaatagagcttagctagata
gcNACCACAGGAATATAAAGTTAAGAATTGAGCTCGGATGTTCCGGTGAT
TTTTAAGTAGTTCCGtacataaaaaatgttttttttttgtaaatttatgc
GAAAACTTTACATTCTCATATTCAACGCTAAAACTAATGCACTATTTAAC
CATCTTTTTGTACCTTGGAAAACATTGGAACGCGTAAACCTAACTCGGAT
AAACTACATTTGGCACTCTCAACACTTTTCTATAAAGCACTGAAAGAATT
GTTTCCTACAATCAGGCTTTATCCTTGTTTTGCAGAGTCATCgtgtttta
tgatttttatgaataactttgtGCAATTTTTATACTTTATGCTTTTATGC
TGAGTATCACCCCTTCATGATGGGTTTCTCGTGGTTCAACCAAATATCTG
ATAACCTGTTAAATAAtttgatttataaaaatatttgcttttatttatga
tttacaatagaattctatTTTAGATATTCACCTGCACTGCACGAGCATGA
ATTCGTGATCCTACatgatttcctttttttatcGAATCAAGTGACCCTCG
ATCACAGGGGGAGGGTTGCATTTAGGAAAAGCGAGCTCTGGTAAACCCTA
AAGTTAataaaaaaccatcaaaaagtaATTCAGTCTATAAAAAGGGTTCT
AAAAtcttagtctctctaagggagtcgtaaaaacttcaaaaattggACAC
AATTTCCAAAATTCTGTCTCTGTAAAAGGGTCAATTGTTGAGCTTTGGTT
CGCATGAAGCTCCATAGTTTTAATATCGCAAACCCAATAACCCACAGGCC
CTTCATTCATGGTACCCGGTATGTATTATCTATAACAGGTCTTTAACATT
CTCATTACATGACGTTACAATCCGATCGAGATTTATCGATTCGCAAATGC
AATCGACGAAATTCATACAACTTTTGATCACTATTTAACGACAAGACAAC
ATCATTGTTCATATCTTTCATCTCCAAAATCTGACTCTTCTTCAATTTCT
GCGTCttcaaaatttccttaattAAGGTTTTGACATTCTTACATGCCAGA
TCACTTTCAATGATTTCGTAAAATACAGTTACCTCTCCAGTGTCCACGAA
TGTGAGCTGTATCACGACACGCTGCTTCATCAAGATTTTATCACCTTCTA
AAAGATTATACTCTGCAAGAGTGTGACCGTCTTCTAACTGTCGGACATCT
TTGGAGCTCcacaaatcaataaaaaaataattctcctCATTCTTTGCCTG
TCCAATAGCCTCCGCCACCCTGTTTTTAAGGACAATGACCTCGTCATTAT
CGCTTACTTTCATGGTGAACGAAGAGCCAAAAGAAGTAGAAAGAGCTTCA
AAGTTTACTCTAGGTTTTACGATCCATATGTCGAACGGTTTCTTTTCCAT
TACCGAATTGGGTATTATTTGAACCACGAGGTGTTTTTNGCGAACGAAGA
AGAGCCGTAACGGTTGGCAAGAGCTTGAACATTTACTTTAGGTTTAATCC
AAATGTTGAAGGGATGTTTATCGATAACCAAATTCAAAGTCATTTGGCCC
GGTGAATTatactttaaaaataaatcGAATGTTTTACGATGATCACTTAA
TTTTTCGCCTTTAAAATAGATGACCTGGTCAGAGTTTCGGATGTTGTATT
TCTGACGAACATACTTACGAACATGGCTAACATATTTGAATAGCTCTGAC
CTCAACACTTCTTCTTTGGTCAAAAACTGTAGTTTAAACGTATTGAAATC
CTTTATAGGTTTAACAAGGTGCTCCTcgcaaatttcatcaaattgtTTTT
CGTTTGTGAATTTGCCACCGTAACAAACAACGGTCAGATATAAAATACCA
CCTTGAATAATGTCCGCCTGATCCTGATGCGTTTCATTTACTTCTTCCAC
ATCATCTGCGTCGAAGACATCTTTTTAAATGTATTCATTATTCTCGAAGC
GCCGTTTCCCTTCACTATCTACTAAGACTTGATTGCGCGCCGGAATACCG
AAAGCTTGTTGTATTTGGGTTCGTATTAAATCTCCTGaacggtacacgtt
tttttttttttaagaaacacacttttaagaaacatgaggctcagaatgcc
taaaaactaagaaacatctaagaaacatgctgaggctgagc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040141TCONS_00040141Clytia hemisphaericatranscript
TCONS_00040142TCONS_00040142Clytia hemisphaericatranscript
TCONS_00040143TCONS_00040143Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002328supercontigsc0002328:6783..10823 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.12	1.86	1.19	1.15	4.23	2.73	2.29	2.42	1.49	1.74	3.86	1.23	1.91	1.64	1.64	2.44	2.44	2.91	1.86	1.18	3.77	3.58	4.47	4.91	10.66	11.49	3.65	3.14	2.47	1.74