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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040141 ID=TCONS_00040141|Name=TCONS_00040141|organism=Clytia hemisphaerica|type=transcript|length=1322bp
Nggggtagcaaaaaatcatcaaaatttgctctgtccgggggtaatttggg
gtgtccgggggtcagcagatgcttgtccggggggtaaaacctattgtccg
gggggcaaaagtcaccctgttcagggggtaaatcactaacaATTGTTATG
TCCTCCacccccccatgtacaattgtttttttctggaagagcccattttt
gaactttggttCGCATAAAGCTCCATAGCTTTATATCGCAAACCCAATAA
CCCAGAGGCCCTTGAATGATGGTATCCGGTAAGTATTATTTATACCGCCT
CTTATTTAACATTCTCATTACATGATGTTACAATCCGATCGAGATTTATC
GATTCGCAAATGCAATCGACGAAATTCATACAACTTTTGATCACTACTTA
ACGACAACACAACATCATTGTTCATATCTTTCATCTCCAAAATCTGACTC
TTCTTCAATTTGTGCgtcttcaaaatttctttaattaaCTTTTTGACATT
CTTACATGCCAGATCACTTTCAATGATTTCGTAAAATACAGTTACCTCTC
CAGTATTCACAAATGTGAGCTGTATCACGACACGCTGCCTCATCAAGATT
TTATCATCTTCTTTAAGATTATACTCTGCAAGAGTGTGGCCGTCTTCTAA
CTGTCGGACATCTTTGGAGCTACACAAATCAATAAAACAATAATTCTCCT
CATTCTTTGCCTGTCCAATAGCCTCCGCCACCCTGTTTTTAAGGACAATG
ACCTCGTCATTATCGCTTACTTTCATGGTGAACGAAGAGCCAAAAGAAGT
AGAAAGAGCTTCAAAGTTTACTCTAGGTTTTACGATCCATATGTCGAACG
GTTTCTTTTCCATTGCCAAATTGGGTATTATTTGAACCAAGTGTTGTTTT
TTGGTTTTATGATATGACGGAAAGATGATGTCCCCAATAGTGTTTTTTAG
CGTCTTTTTTGAATATGTTTTGTTACTTCTCTTTACTTGTgtattttgtg
tatttttttctAATATGCACTTTTTATACAATAAGAATATTCTTGGATAT
gctaagtcaagattacgtcattgtTTCATATCGGAAACACCTCCAAAACa
ctggaatttgacccctgagtattactaaaaatagcaACACAGGAGTCAAA
TTCcgatttttcgggtgtttccgatatgaaaaatgacgtaatcttgtcTT
ACACATCTCAAGAAAAGGAGAAACTCTACAGTTGCCGTTACTTCTAATAA
ATGCCATCTACTTTTAAAATGCCCCAATCTCGAAAAAATAACCctctttt
gggaaatttttttcaataaatg Run BLAST on NCBI transcript from alignment at sc0002328:6783..8104+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040141 ID=TCONS_00040141|Name=TCONS_00040141|organism=Clytia hemisphaerica|type=transcript|length=1322bp|location=Sequence derived from alignment at sc0002328:6783..8104+ (Clytia hemisphaerica)
Nggggtagcaaaaaatcatcaaaatttgctctgtccgggggtaatttggg
gtgtccgggggtcagcagatgcttgtccggggggtaaaacctattgtccg
gggggcaaaagtcaccctgttcagggggtaaatcactaacaATTGTTATG
TCCTCCacccccccatgtacaattgtttttttctggaagagcccattttt
gaactttggttCGCATAAAGCTCCATAGCTTTATATCGCAAACCCAATAA
CCCAGAGGCCCTTGAATGATGGTATCCGGTAAGTATTATTTATACCGCCT
CTTATTTAACATTCTCATTACATGATGTTACAATCCGATCGAGATTTATC
GATTCGCAAATGCAATCGACGAAATTCATACAACTTTTGATCACTACTTA
ACGACAACACAACATCATTGTTCATATCTTTCATCTCCAAAATCTGACTC
TTCTTCAATTTGTGCgtcttcaaaatttctttaattaaCTTTTTGACATT
CTTACATGCCAGATCACTTTCAATGATTTCGTAAAATACAGTTACCTCTC
CAGTATTCACAAATGTGAGCTGTATCACGACACGCTGCCTCATCAAGATT
TTATCATCTTCTTTAAGATTATACTCTGCAAGAGTGTGGCCGTCTTCTAA
CTGTCGGACATCTTTGGAGCTACACAAATCAATAAAACAATAATTCTCCT
CATTCTTTGCCTGTCCAATAGCCTCCGCCACCCTGTTTTTAAGGACAATG
ACCTCGTCATTATCGCTTACTTTCATGGTGAACGAAGAGCCAAAAGAAGT
AGAAAGAGCTTCAAAGTTTACTCTAGGTTTTACGATCCATATGTCGAACG
GTTTCTTTTCCATTGCCAAATTGGGTATTATTTGAACCAAGTGTTGTTTT
TTGGTTTTATGATATGACGGAAAGATGATGTCCCCAATAGTGTTTTTTAG
CGTCTTTTTTGAATATGTTTTGTTACTTCTCTTTACTTGTgtattttgtg
tatttttttctAATATGCACTTTTTATACAATAAGAATATTCTTGGATAT
gctaagtcaagattacgtcattgtTTCATATCGGAAACACCTCCAAAACa
ctggaatttgacccctgagtattactaaaaatagcaACACAGGAGTCAAA
TTCcgatttttcgggtgtttccgatatgaaaaatgacgtaatcttgtcTT
ACACATCTCAAGAAAAGGAGAAACTCTACAGTTGCCGTTACTTCTAATAA
ATGCCATCTACTTTTAAAATGCCCCAATCTCGAAAAAATAACCctctttt
gggaaatttttttcaataaatg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040141-exon-sc0002328-1491911889:6783..8104 | TCONS_00040141-exon-sc0002328-1491911889:6783..8104 | Clytia hemisphaerica | exon |
| TCONS_00040141-exon-sc0002328-1510915933:6783..8104 | TCONS_00040141-exon-sc0002328-1510915933:6783..8104 | Clytia hemisphaerica | exon |
| TCONS_00040141-exon-sc0002328-1575043694:6783..8104 | TCONS_00040141-exon-sc0002328-1575043694:6783..8104 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002328 | supercontig | sc0002328:6783..8104 + |
Blast
The following BLAST results are available for this feature:
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