XLOC_024198 (gene) - C. hemisphaerica

Overview
NameXLOC_024198
Unique NameXLOC_024198
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002257:13209..22238+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024198 ID=XLOC_024198|Name=XLOC_024198|organism=Clytia hemisphaerica|type=gene|length=9030bp|location=Sequence derived from alignment at sc0002257:13209..22238+ (Clytia hemisphaerica)
taaacatttcaaaaatacaTTAATAATATAAACACTCTGCATGATGAGTT GGTTCTTTGGAAAGACACCCTCTTCGTCATCACAAATCCCTGCAACCACA CCACTTCAGCAACaaagaataaaacaaatcaaatctTTGTCAAACCATAA CCAAAAGTAAGAATACctgatttttctataaaaaactgTCAAGAATTCAT TGAactcttgttgtttttttagtATTCACTATTTTTTTGTCTCATTGTGT TTACACGCTTCGATGGCcagaaatgttaaaaacaaggcTTTGGGGACCct aaaatacccaatttcttaggaaaatggacaaaaatgctcaaaatatgggg aaaataagaacatgtaaagaacatttttaggcttaaaactcaaaaagtta agaacatccgaaggcttcaaaaattttggaagtcctttaaagaaaaatat gtaTTATTATTGGTTGCGATTACATAATTAATAGAGCTCAACCCTACAGT TCCTTCTTAGTATGATGTGTAGGAAAATACATACAAATATGTCTTTCAGT CTGCAAATAATGCAAATAGCCTTGAAAAATCTGCTATAACAGATTCTGTT AATAGATAAGTTTGCCAATTTGCCACGACTTACCGCCAATAGGGTTTata ctgaccctgtatatctCCTATTCCTACCTCGTGTAACTAATAATATATCT GCTCTGACACcaaaatctcctgagtgaatatagttgggcAGAAATTCTTG AAATGCATACGCTGCTCTCCCACCCAAATTTTCtaagtgaatatagttgg acagaaatgcTTATTTCTTCACGTAAATAATGAaagcattattttttttg accgctttgaaattattttcttttcagtGTCACAGAAATCAAGAGAGACA ACATCTACAAGGTTACTTTTCTCAACAGCAACAGCAAAACGTTTGCCTTG AATATGTAAGAATTAGATTTTATAGATTGTTGAATCTTTATTTCAAATCT TTGTAAAAGCTAAAAACATATATGCTAAAAAACTTGTTCTCTTAGTCTTT AGAACAATGGCAATTAATTAAAcacttttccttcttttttttcaaactac TTACAGTGCCTTTCTTTTTTTAAGTCATCTTCCACCTGAATTTCCAAACG AGAAACCGTACATCACACTCAGCCCAAAGTCTTATCATCCGTGGGTGGAT TCCACGGTAATTATTTCATATTCTAGAcatgaactttattttttaatgtt tcaaatgtaaacaactCTGTGAGCTTTCATTGAGCACTTTTGGCATAGAG AAGAATAATtagattgtttattttgttgTGACTCATTTTTGGTTTGTagc ttttctcttttttttttctttgttcttttatCTTACTAAGTTATGTAATA CAAGGTTTTGTAGCAAGTAATGTATATGTGACTTAGGTATCATCCGAAAA ACAAGGTATCAACAGTACAActtatcaactttctttttactCTCTTATTC ACATTCAGACTGATGAAATAAGAGGATGCGTGGCTTTGAATTCAGTAAGT ATCAAAGTCAATATCATTGTAAATACAAAGTAATAATGTAAATGTAAGAT TAGTACTAGTGAAAACTGTGGTTTTGAACCAAATTTGACGAGTCTTTTTG GAAGATTAACTCTCTGAAGTTTATATTCACGATATAAAGTATTATGAATC TATTTTGTATTTCAGTTTTACATGCATTCTGATCTGGGAAAGGTTGTGCA ACAAATtatcaaagaaatgaaaaagacCAGCCCTGTTATAAAGTAAGTTG TCAATACAGGTTACCGAAATCAGCATAAACCTTTTTTACAGAACCAGTCA TGTTTATCGAGCTTACAGAACACaactagaaaaaaattaagaatttgaCG AGGCTCGGAATTCCCGAGTGAgcaaaaaaccgagttatgacgtcatcaaa cgaAAATTTTGACATCACATCCAAAATTTCTTGCTCGATCTTTGATTTCC CTAACTCGATTTGATAGATTCTAGAAATATTATTATTGACAACGATTAAA TTGTTTAGTAATTGATCGCCTAATTAATATAACTTTTGtagaattttcag attttgtcgcCATTTGCTTTGTTCTTTAACACTCAAAGGAAACCCAAAAG ATTAAAGCGTGCTATAAAAAGcgggggaggggtactaggCTTGCGAgctg aaaatcaaatttgattttctgattttccgacccttagcgggactaatcct aagtaccccccccccggataaGAAGCTATAAAAGCTGACATATTAAGTCA GcggaattaaaaaatataaagctgCTTGATTGTGTACATTATTTTGGCGG GTACTTATTTCTTCAGTTTGCCAGAATCAGACATTGTATTAAATTTGGAG GGTTTTTAATTTGGTGgttgttgaaaaatgaagccttaaaaaataatgta aaaacagcagcgaaaaaaattgcaaatcatTACGCTCCATtatattttgg gcattgcaaGTTCGGAAGATTTCCACTTATAAAAAGACACTCCCCtgttg gaaataattttttccgaCCTCGTTTATTGGAACAAATTCACCATATTCAG AAGGTACGGAACTGTACAgctatgcaaaataaacaaaacaagacgaaaat ttcgcctaatatttaaactgcatgggaaaaacaagTAGTTGTGATGGAAG CTAATTCAAAATCTACtactaaaaagaaaatattgagaGTTTTTGGTCAT AAATTAAGTACGGGATATATTGGTTAACACAGCCAATAGATATTTACTTT ATCTCACTTTCAAGAAATGCAATCCATATACAAATTCAATTAGATTTTCA TGGATATGCGACTCGAGTCAGGGACACATTTACCAAGtttcagtaaattt tttttctctcgaaaGGTTGCATcaataaggaaaaaaatatatccaaCACT CGTGTTTACTTTGCACGATGGTATGTAACTATCTGTTAAGAGTAATCTAT TCAGGATAAAAAGTCGAACGGGAAGTTATAACTTGACTCCCGAACGGGAA GATCTTCCCGATTAGGTTTCGAAAATATCTCGGCACTCAAACGGGAAGAT AGAGAATCCTTCCTAATTCGGAAGATCTGCCGGTTTAGAAAGGTTTGATT TCTTCAAAACAGAAACGGGAAGTAAgatagaaaaatgtaaacaaagaaac AGACTTCTCGATTCAGAAGAAAATCCTTCTAAAACTCAGAAAATCGTCGC CTCAACATGAAGCACTTCATTTGTCGTTTTTCAATCAAACTGTTAACATA ACAAATTTCAGATGAAATATGTTTTGGGTATTTGTTAACAAGTCTTTCGT TATCTTTCGTTAAATTTTATCCtctgatttttgcttttttccacTAACTA CCAACTAGAAGAACCATAGTTTTTCAACAGAAACAGGTAATGTATTATAA ATGTTCTGCAACTCTCTTGAAGGTAGGTCCCTCTCTTAAATACATTAGAG TTTCCGCTGTCGCAACGGCAACCGCGACGGCAACGTAAAAACGTGTGAAA TCGCATATAGGTGagaaaaaatatcagcgttgtCGTTGTGGCTGATTTTT GTTTCCGCAATTATTTTTAACAACGGCAAAGTGTATCATTTTtacaaagg aaagaaaaatggtaaattttggagaaaatctcgaaGTTATTCTCTTCCAA TGCAAACTAAAAATACTGTAATAgaaagaattattttgaaatgtaattat CAACAAATTGCACAAAGTTAAAATTAggatttctaaaaatgaatacGTGA AACTTACACCTCTTGCACAAGAAAAAAGCTaaattgttacaagaaatgat aaaaagcttaaaaatattgaaatattttttttcaaaactgtctTTACTGT TTGCTTGACTTtgatatttatgaaaaaatctCACGTTGTCTGACAACGCC AAAATGAGTGATTTGCCGTCGGGCATGGCAAGAGAAACCGTCTAATTGGA GTTTACTCAGAGTTTTGACAGCTCAAAGGtgtgaatttgatgttttcacG TTACCGTTGCAGTTGCCGTTGCGACTGCGGAAACTCTATTATCCATTTTA GTGTAAATTATGACTTAAACTTGCGGAAGAGAACAATATGCGTAAATATG CGAAAATTAGatgacaaaaaagttttttaaggtTTGAAAAGATAATTGAG TATAATTATAGTTTTATTGGTCGAACTTCTCAACTCAAAAATATCACAAC ACCTTAATTTATTTCCGTGGCAAATGGGTTGTAGCATgggattcttataa agtagattcTTATAAGAGAAATAAATACCctattacattttattttttcg attttaagaggggcgtttatttgaggaggcgtttaaaagaagggggcgtt tattgaatTATTAGCGGGACTAATACTTGTGAATaatttaaatttagtga gtttagTAATATTCCACCGTATcaaacactttcgttttctaaattttatt ccacaccgccgcgaaaggctatcgtaatacttttgcttttgtttagtttt cgtagATACACAACACTTTCTTGTATaagatagctaactcgaaaatgtTA ATTATGATAAACAAAATCGACTTAGCTAACTCGGAATAttcgaaaaattt taatttgacaaaaaaaatcgagttagctaactaGAGAAATCAGAAATTGA GTTAGATATTTTGATTGTGACGTCAAAATTTTCGTTTGATGATGTCATAA CTCGGCTTTTTGCTAACTCGGTTTTCTAACTCGGTTTttctaactcggga attccgagCCTCGAATTTGACTTGTCCAAAAAGTGAATGGActaataaag aaaagaaactcaACAGATATCTTCATCTTActtaaaacatttcaaaactt TATGGCTATATTTGTGTGGCTATGCTATTTCGaaaaaacttttaccaaaa actttaattgtgataattttgatttttctctcttttcagAAAAGTGGATT CTCCAACATCCTCACTACCTTACAACAAGTCACCTGAAACAAATTTAACT CCACCAATTTTTGCTATGCCAAAAAGGGTACTCTTGtggttttattttaa tttttgttgtttacaaACGTTTGTTCTTTCCCTGATGTCAATTATATGTA GGGCAGTTGTAAATTGATCAATTTTCGATAAAACCTTGCcacatttttat tttgaagtacTAACATATCTAACATCAAGGACTTACAAATATATTATAGC TAGCTAACACATCTTGAACACTAGAAAGAGCTACTCTATCTTTCCAAAGC CATGACAGCAAGATAATGTGCCATCTTTGATAAAAGTAGACCACCGTTAA AGTATTTtgacactgcaatgacttcaagaTTTCATGGATTGCCCAAGAAG AATTGTCATCTGGGCCATATTGTCAAGATGGCCCAGATGGCCCATAATTC TGCCTCTATCAGGGACAAAGAAGCTTCatatagtgttttatataagacaT CTGTGATAACTACTAATAAATTGAGTTAGTAATACTATTCCTGTGGTAGG AATTGTATAGTATTCCAAAATGCAGCATAATTTCTGTTCcttataacacc cccttctcacagacccactgggaacccttcccactggaaaaattgtccaa aatatcgtccgcagtggaaaattatcttccaatttttgtccccactaaaa ataatcaaacaaaccaatcctcactgcaaaacatGATGCTTTTTTTCTca accccactgaattttctgacttgaaaacaaaagaattgaaatccccagcc ataagaaatatgataatatcaatccccatcgagtttcagtccgttgtttt tatccccactggctgaaaaaatcctaccgggtctgtgggAAGGGGGTGTC TTatgatttaaaatcaaaagcTCAACTTGCAACTATCAGGTTTTTTTTAG ATTCCTCAAGATACTGGAGATCCTGACCTTGACAAACTGTTAGGTGATCT TGGTGAAAAGTCGTAAGATCGGTTTAATTAGCCTTCCTGTTTTGAAAACC TTCAAAATCAGTTTATATAGTAATTTTCTATAGTACTTGCCTTTGACTCC ATTTTGACGGTCATTGTTTGTATCGCAaccttcagtgttgaaaattcaaa atctcttcTATATATTCTTTGGTTTTTTAGAAATTCTGAATTGGAGCAAA TCTGTAATGACCCTGATATACTGATTGACCAAATTGAAAGTATGGAGAGT GTAAGTTGTcctgtaaattttttttgtcagaaTTAGTTGAGCTAaataaa aatgactttttcatgCCAATTTTTATGATTGTTGTTTTTCTAGGTGAAAA AGCTACAGACCGACCGTATAAAATGTATAGAAGAAAATGAAGCTATTGCA AGTACGTCAAATCAATGGCATTTCAAACTGCTTTTCCCTATACTTTTTTA TCAGCATTCAAAGCCTGTTTGTAAAGAAAATCATTTAACGTATCCACTTC AATTTGCTCGCACAGCATTTATGAAATAACTTTTTTAGAACGAttcattc ttcttttttgagGTGCAAATAACGCAAAGTTCTATTTTATATCAATGCCA AAACGTCTACATGCAGACCAATCTTCTTTTTTCGATGCcttgttttaaaa atattttaatagtTTCTAGATTATGCAGGTTGCAGATTGCTATGCACTAA GCAAAGTGTTTTCCAATACATAACACTTCCATTCTATCAAAACatgttaa atttttatttactcCTTTGTTTAGAATCTAGTCTTGACTTAGAGCCAGTG ATAGACGATCTGAAAGGAGATTTGAAAGAAACCTTTGAAACATACAATGA GCTGTTTTATTCATGCCAGGATAAAATACAAAGACAGAATGAACTGTCCC AGGTGATTatgttttctttgtttataACAAACACTGTAACAAACTTTCCA CAACGATCAATTTAGGGGAATTTTCTTGATCTTCTCAATCAATAATCATT ATACACTTATTCCAAATCTATGTAACCTTTACAAGTTACTATAAAAACAA ACGAGAGAACAAGACTCATTAGAATACGTCTCTTTCTTCATTATTTAAGT GGATCATAGCTAGTTCTCTCCTAATCTTGGAAGCTTTTATGTTGTTGTAT ATCATGGATTAATATCACTCGCCATTAAAAGCCCTGGTCTAAGTAATATC CTCCATCGTTGAACAGAGTCTTTCAAAGTAGTACCAGCCAAAAAGTCGAT GCGGTGCCAAAACTTTTGCTTTGAAGATCTAGCACTCTCGTATATGCATC AAgataccattagggtaccactttctaaactctgatcaaagatgtTGGTC GGCCAGATTTGAGAAACTGCCTCTAAGGTTTATACTTAATTAATCTATGG TTAGTTTATGTAacgaaaaaattcttttctgcaGATATTCGTGTGCATGC TGGAGGAGTCAGATTTATGAAAACCTTTCATTTATTGAATGAAAGtaaac tttttctaattttgagtATTTCTTTTAATCTTAGTTTTATGAAACTGGta atattttgacaaatctACGCATTAGTGTCATGCAGAGTGAAGAAGAGTCT GAAAATATTGCTGAAGATTTCCTAAAAGGTCTGATATTATTCGTTTGTAT GTCTGTATATCCCAAATTTTTGGGGTGGTCTGGAGACAAAATAGTCGGAT TTGGCCGAAATTTTAACAGTCTTGTTCCTGTGGTGAATATCTGTGatact ttcttcatttttcaaagaaaaattagtttttatgGTCCTGGGGACAAGTT TTGTCCCATActgaggctaaaacttttggGCAGCCTGAACCTTGGTCAAC TTTTAGTAAAATACTGTATCAACCAACACGTATAGCACAAGATTACTTGG TGCCTTaggttttcctttttttaattcatactTTTCTTTTTGCAGGCAAC TTGAAATTGGATGATTTCTTGAATAATTTCATTGAGAAAAGAAAGGTAAC GCAAAtaaacccaattttttttattttcattttctatagccTTTGATAGA ATTGTCACTACTTTCCtataatatttatatttttattgtgGCATCGCAAa tagtaaaatttaaaatatttctgttTATTCTTCTTTAGGAAACCCATCTA AGGCGTGTCAAGGAGGAGAGAATCAAATGCCTGGTCCCATACTGATCTTT AATTTGCATCTTGGCTTAAGATAACGACGGAGATAAGAATGATTCCTTGA AGGAGTCAATACTGATCTTTAATCTCACCTTGGCCTATAATAATGGAGAT AGAAATGATTCCTTGGGGGAGTCAATACTGATCACCTTCACTTACATCGT GTCTTATGAAAATGGAGATAAACATTATTCCATTGAGTGGTCAGGATGAT GGAGATAACCCAGATGATTCATGTGTGTCATCATAGGTTGGTTTGTTATG GTGGAGATAATCTATTGGTAAATTGTAACATTCGAAACTTATTATTCGAT CTCGATATATGGGTTACGAGATGAGAGTGTTGAATTTCAGCATTTTCGAT AGAATGATATTATTTAATAGATAAAAACGTCTTGGTTGCTATTTTAAGTA AATTACTCATCATAGGAGCATCTTTTGTGCTCCTGCTGAGTAAGttgagc tgaaattttgcactgGTAACACTTGTAGTAATAGTAAGATACATTTCACT GAATGGAACAAATATTTGTACGAAGCTTCATAATAAAACCATTTTTGCCA TGATTTTATGGTTCTACTAATGAGACTTGGACATATGGACATATTTTTTA GCGTAAGAAGAATTTATTATATCAATGCAATCAATTAAAGGACTTGAAAT GATGCTATCATTGTACGAAAATGGTATGGTAGAATGTATGTCAGATCTAG TTCGAAAGCTTGAATCTGCTTTTTCCAACATCCATTGAAAAATGGTGTTT TGTAATGGTTATAGGGGAagattgttttttcaaaaagttttgataaatgc GAAAGAAATAACAAATTCATTGAAATTGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039957TCONS_00039957Clytia hemisphaericatranscript
TCONS_00039958TCONS_00039958Clytia hemisphaericatranscript
TCONS_00039959TCONS_00039959Clytia hemisphaericatranscript
TCONS_00039960TCONS_00039960Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039957-proteinTCONS_00039957-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002257supercontigsc0002257:13209..22238 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
VPS37Avacuolar protein sorting-associated protein 37A isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.83 25.79 8.84 6.53 35.31 28.17 31.37 32.44 22.2 22.11 26.86 23.89 16.15 13.08 22.82 17.95 15.84 21.63 25.19 38.05 26.17 27.72 41.66 41.6 23.34 25.28 24.72 22.62 20.76 23.04