XLOC_024189 (gene) - C. hemisphaerica

Overview
NameXLOC_024189
Unique NameXLOC_024189
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002251:2701..8219-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024189 ID=XLOC_024189|Name=XLOC_024189|organism=Clytia hemisphaerica|type=gene|length=5519bp|location=Sequence derived from alignment at sc0002251:2701..8219- (Clytia hemisphaerica)
GGAGACTACTAATGTTGCTACTACTATTAAGAGTGTTTTGTCTTTTCTGT GTGATACTTTATTTTCAACCTTAATATGAAAATCTTCTGGTCCTCTTAAT TAATACCGTTCTTCTATCAAAAAAGCTATTAAAATTGTTCTTGCAATGCA TAATTTTCATTTTTTTCAATTTATTGATTTACTTAACCTCTTGTCAACTA AATTTATGACTTTTCCTTTTCGCACAGAAAGAAAAAGTTATTATGTTATT ATCTTGTTATTAACCAACGGCAACATGCAGAATGATGAAATACCCACAAA TAGTAAGTTTGAATAATTTTCTTTAGACCTTCTTATATCTTCTTTAAAGA TGTTTTTCTCCTCTTTATTTTTATTTTTATCAATTTAGTAAAATCTAAAA TCTCAACTATTAGTACATCTTATTACATTATTTTTTTCGAATCGCATAAG ATATTACACTTGANTGGAAAAGGGAAACAGATATTTCGGGGAAATGGGCT CGTTGGCTGCTTCTGAAAATCTAAAATCTCAACTATTAGTACATCTTATT ACATTATTTTTTTCGAATCGCATAAGATATTCCACTTGAAGGAGTACGGA TTACACACTTTTTAAAAGTATATACTTCTCCTTAGGGAACGATTTGATTA CGATTACTGTGACTGAGACATGAAACTATATGACAAAGAATGACATAACA GCGATTTTGTACGACTGATGTGAAATACGTATAACCGTTACAATTTGTTA ACATGAAACCAAACCTACCAATACTGGTGATTTTTTCTATTTCCCAGTGA TTTATTATTTTAAGTATCAGTTTGTTAANAACAGCGATTTTGTACGACTG ATGTGAAATACGTATAACCGTTACAATTTGTTAACATGAAACCAAACCTA CCAATACTGGTGATTTTTTCTATTTCCCAGTGATTTACTGTTTTAAGTAT CAATTTGTTACTATTTATCATTTCTGATTTTGGGTCGTGTGGTGATGGGG CATATTTCAATGTACAGTACCTAACATAGATGTATGTAATCACCTCAAGC TTGTAGTTTCATCTCAATTAATTACACTTTTCAGGTCATACTTCCACGAA AAGAAAGAAGGATATGAAGAATATCGATTATGGAAAAAAAAGAGTCAAGG TATATTGTGTTTACATAGTTCGTCCCCCTTAAGGGGATGACACCTTCCAA AAAAATGAAGAAGGGGGGGCGGGGGTCAGAAATTTTCATGAAAAAGGGGG GTAGGAAGGAAGGGGGGTTACTTATAAACTCTAGACTATTTTCAAGCACT GTTATGAAATTTGGTCTTCATGAAAGAAAGTTTTCTGTTAGAGTAGTTTA GCTGAGTGAAAAAGAAGAAAGAAAGTTTATTATTTCGCTTTTTCTCTCTA AAGATATTTCACATATATTTGTTAGCTGTTTTTGTCCAAAATCCTTGGGG GGTAGACATTTTTAGAGGTTGAGGGGGTGCCAAGAAGGGGTGTCAGACCC TTTTCCGCACTATGGTTTAGCTCGATCAAATAACACAAGTCACCTTCCTT CCTGAGTAATCTAGAGGTCTTTTGGTTCGTCTGCAGAAGAGTTTCTACAG TGCAATACTAGTGAGGTCTAAATGAGGTAAACAAAGAAAAAGTTCACACC TTTTACGCTGAGTATAGGTAGTACACCCCTGTGTCACAGACCCGGTGGAC CCCCCCACCCCGCTGAATAAATAGGCCAAAAAATCGTCCCCGTTAGAAAA CACATCCTACAATTTCAACCCCACTGCGAAATTGCTCTATGATTTTATCC CCATTGAAAACTGAATGTAAAAAATTACACTCCAAAATCATCCCCACTGG AATTTTTGAACTGGAAACAATAGATTTTCTATCCCCATTGGCATTTTAAT AGAAATTTTCATCCCCACTGAGGGAAAAAGTTCTACCGGGGCACTGAGAC AGGGGTGTGGTAGTGTAATCTAAAAAGAAAGTAAAAACGAAAAAAAGCTC TTAGAAAACCTCCCTAAATGGGTTTTCCCTCTGAAAAATATTGAAATTGG CGAGGGTGGGAAGGGGAGTAACGCTTAGCATCAAAGATGTATCCNGAAGT TCAATATTATTTTTTTCTCATCAGCTTGTTATATTGCTTCTGTTACATGT CGTTATTATATTTTAGAAGTCAAAGAATTCAAGCCATCGTTAGGGCAAAA GCCACCCCGTGACGAATCTTCAACAACCCAGTCTTCAACAACCCAGTCTT CAACAGCCCAGTCTTCAACAACCCAGTCTTCAACAACCCAGTCTTCAACA CTCCAGTCTTCAACGGTGCCTCTAGAGGAAGCCTTGGAAGTTCTTGAAGA AGGAAATGTTTAATATTTAAAAGTACTCGATTGTGGTTTCAAAACTTCCC GGTGAATTTCCCTTTTTTCTCAAATATTATGACCTTGATTGTAGCTGGGG ACCTTGAGTTTTGTATAAGATTCCCATTACTGCACTAAGTAACTTTCCGA AGCTCAATTTTAACTATCCTAAGTCCTGGTCTTTTTCCGCTAGAAAAGTG GCAAAGGAATTTTAGTGCGGAAATGGGATACTAAACTTTAATACTTGAGC TATTCCCTTCCTACTCACCTGTCTTAAACAGATATAAATCAGTGCCAAAT CAATTTTCAATTTATCAAGCATTCGTCAGTCCTTCATTCTCCTTTGTTTA CATTTTTAGCGATTCTCTATTTAGCTCTAGTTCGCATTCCGTTTAGCCTG ATTCATTTGGGCGATTCCTTTTTTTCAGCTTTTTTCTGTCCTCTACAAGG GAGATTCTGGGGAGAAGCTATCCTCACCTGCGGACAGGCCCCGTAACAGA TGAGTGTTGTTTCCCCCTAGGGACCGCTTTTGTCCCTGTGATCTATACTG GTCACTCCACTTGTACATATTCGAAAAACGAAAACTTAGATATATTAGGG CTCTTTATTATTTTTTTAAATGTAAATACTACTTAGAGACTATTTTATGA TTATATACTTTTATGATTATATACCATAATGTTTGGTGATAAAAGAGACG ATAAAAAAACAATAGTTTCATGCGTCTCAAACAAAACTTTTTTGGGAATA CGTTGATGAAGTGAAGTGTAAAAGGATAGATAAAAAACTTTTTGAAAAAA TCAATTCACACTTCTCTGATTGATATTTAAACTGAATCGCTTTATCTCCC ATTGATTGTTTGATTGATTATATTGTATTTAAAAAAATTACTAATTGAAT AAGAAAAGAATTACGANTTGATTGATTATATTGTATTTAAAAAAATTACT AATTGAATAAGAAAAGAATTACGAATCTCTAGTTCATTTCTCCACCCCCA TCGATGTGTTTACCCTCTCCAGACTCCCCTCCCTACATTTAATCGATTAC ACGTTTTTTTTTTTTAAGAAACACACTTTTAAGAAACATGAGGCTCAGAA TGCCTAAAAACTAAGAAACATCTAAGAAACATGCTGAGGCTGAGAATGAG AAAATAACTATTTTAATTCGGTTTTTCTTAAGAACCTTCCAATTCAGCCT GCAATGAGGCTGATTATGTCAAAAAGTTTAAAAACATGTAAGAAACATTT AAGGCTCAAAAGGCCGATTTCTTAAGAAACATTGAGGCTGCTTGGTAAAA CNCCCGGTGGCCCCCCCCCCCCACCCCGCTGAATAAATAGGCCAAAAAAT CGTCCCCGTTAGAAAACACATCCTACAATTTCAACCCCACTACGAAATTG CTCTATGATTTTATCCCCATTGAAAACTGAATGTAAAAAATTGCACTCCA AAATCATCCCCACTGGAATTTTTGAACTGGAAAAAATAGATTTAATTTCT ATCCCCATTGGCATTTTAATAGAAATTTTCATCCCCACTGAGGGAAAAAG TTCTACCGGGGCACTGAGACAGGGGTGTGGTAGTGTAATCTAAAAAGAAA GTAAAAACGAAAAAAAGTTCTTAGCAAACCTCCCTAAATGGGTTTTCCCT CTGAAAAATATTGAAATTGGCGAGGGTGGGAAGGGGAGTAACGCTTAGCA TCAAAGATGTATCCAAAATTGGTAACCTGATAACAGATGTTCATAATTTT CTTACGCGCACGGTAAACCTCTAAAGGCGCTTGAAAATTATACATCTGAG GAAAATAGTCCTCCCGCGGAAAATTCTACAACAAGAATCTTGTTGTGCGC CGGAAAAATAAAAACTTATACGGCGCCCTATTCATTAAGACAATCGCGCA ATTTTGTTGTCATTCCCAGTCCTTTTAGACGAACGCGGTCCTTACGATTT CGAGATTGCATATTCGTCAGATTGTTTGTTTTCACACATCCCTTTAGAGC TTCAGCGTGGTGTGCAGAAAACATTCACAATCTGATCTCAGGTTAAAAAT TGGTGAATTACAAAATGCATAATGCATAAAAGAAGCATAAGGGAGTGAAT TAGCATTGGTTTTATTTTGTATTTTAGAAATGTAAAACGTGCTTGGTCGA GGTCGAGGCCACCAGGAACAGACAACTTCGTTGCCCGAACGGGCACGAAT TTGAAAAAAAAACCAAGCCAGTCGAGGCAGCTACTGGGATGAAGACCATC ACCCAAACAAATCGTGATTGGGAGAAGAGTGTAAATATTTTTTTCTTGTG GATTTTACATTAATTGACTCACCTAATAGTGAAAGTTCGATTCACTTTTT TATGGATGAAATTCATTTGAATTAGCTAATTTACTTAGCTCATTTTGTTA AAAGAACACCTGAAGAAAGGCTCCCTGCATGGAAACTGTTAAAAAATAAA AGCTTCAAGCTACATTCTACCTTCATTTAATTTATTTCATTAGATCAAAA CTCTCAACGAACAACACCACTGGCACATCGTCACCATCAAGGCCAAGAGG CATCAAAACAGTGTCGAGTTCCAGTATCTTGGTACCCCTGGCGTTGCCAA AAACTTCATCAACGATGAAAAGATTGGTGCTGCTATCAAGGGCGCTTTTG AGCCTCGTTTTAAAAGAGGTAGGGAATTGTTCATTTGCATTACTACATAA GGTAGGCTCAATTAACTCGTTGTTGCAGATTTATCGTTAGACAATTATGA ATCGTAGAATTTAAAATGAACTTTTCATAATTTAAATTCGGTATTTTCGA TGTTAGGCCGAAACTTGTGAGTGCCACAGCTCGTCACAATGTCTGCTATT CTACCCACACCCTTGTATCAGAATAATATTAGCCAATCCCTCTCACATGC CATGCGTTGACCTAGGCAAAGGTACATTTACTTGCAAAGAACATGATAAC CACTATACTACTAATCGCTATGTAAAACTTCTTGTAGTGGAAGTTCAATA TTATTTTTTTCTCATCAGCTTGTTATATTGCTTCTGTTACATGTCGTTAT TATATTTTAGAAGTCAAAGAATTCAAGCCATCGTTAGGGCAAAAGCCACC CCGTGACGAATCTTCAACAACCCAGTCTTCAACAACCCAGTCTTCAACAG CCCAGTCTTCAACAACCCN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039948TCONS_00039948Clytia hemisphaericatranscript
TCONS_00039947TCONS_00039947Clytia hemisphaericatranscript
TCONS_00039946TCONS_00039946Clytia hemisphaericatranscript
TCONS_00039945TCONS_00039945Clytia hemisphaericatranscript
TCONS_00039944TCONS_00039944Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039945-proteinTCONS_00039945-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002251supercontigsc0002251:2701..8219 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0 0 0 16.34 13.97 15.45 23.17 9.34 10.91 12.33 8.13 7.38 8.32 0.28 0.12 0.14 0.52 0.1 0 0 0.14 0.22 0.1 4.54 9.4 0 0 0.08 0.11