XLOC_024002 (gene) - C. hemisphaerica

Overview
NameXLOC_024002
Unique NameXLOC_024002
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002170:7024..13389+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024002 ID=XLOC_024002|Name=XLOC_024002|organism=Clytia hemisphaerica|type=gene|length=6366bp|location=Sequence derived from alignment at sc0002170:7024..13389+ (Clytia hemisphaerica)
AAACGCCATTAAAAACAaccaaatttcaatcaaatcagCAATTAAAACAA TTCTTTTACAACACTACGCATGCGCCtgtaaataaaacaataaatggtca ttcaaaaagatatcaaaataCCGCTTGCTGTtataaaaacacacaaattt tgcAAGAAAGAATCATTCTCGAGCTGAACTATCAAGCAGAGGACAGCGCT TCTACAAAAGGTTTACTTTCAAAATAACTACAAGAAAATCCAACTAAAGA TGGCAGCTAATGTTACATTCGATTACTCTGGAAAAGTGGTGCTGGTCACA GGTTTGTAAAGATAATTTCTTCTATAATATCTTCTACCTCCAAGTTATAT ACCACTCTATCCCATTGTCATTCATAAAATGTTTCGACCGCTTTTCTGGG GTCCGTGGCTAAAAACATTAGTGTCGCATCCTTAGGTACAGAAAACATCT TGTGTTCAACTAGTAAGTGATTCACTAAGCTGACCTTATCTAGAGCCTga ttgcacgttttttataagaacattcaaaaattttgaagccttgggatgtt gttaactttttgaaaaaaaaatttttaacatgctcttattttcgccattt tttgagtacttttgtccattttcctatgaatTTCGGTTTTCTAGAGTCCG AAaagcctaaagatgttcttcacttgttcttaacatcttGAGAATCGAAG TCTTtatatatgttcttatatagtttgctcttataaaaaacgtctaTTAC TATTTTCATTGGAATCCTAGTCCGAAAAGTAGAATCGTAGAATTTGCAAC ATTGCGTGTTAGTAGATCTTCAATTCCCTTGTACACTTCAGAATTCCTTC TCTCCCAAATAACTTCGAACCATTTTCTGGTATATCCGATACCTTTTATA ACAGATTATAAGCTTATTGATATAAggattaatcaatttttttttaaata tctttatcAGGTGCTGGATCAGGCATCGGTCAAGGCACTGCATACATGTT CGCAAAGTCTGGTGCCAAAATGGTCGTTACAGATCGTAACGAAGGCAAAT TGAAAGAAACGGCAAACAAATGTGAAGAATTAAGCAAGCAAAAGGTAATT CAATTAAAAGCTGAATTAACATTTTCCTCTGTTCGAAAATTAGAACTATG ATATTTTCCCTGTTTCGGGAGTAGGACAAACCCCTAGAAAAGATTACTCT AGTACGAAAGAATCCCTAAAAAGACTTGAACTATCCGTCAGGGTGACTAA TGAGTAAAGGATGGCTATTTTTGGAACACCGTGAAAAAATCACGTCCATA TTTTTGTTTCACGTGAATTTAAACCATCTTGTCATTCAGAAATCCTTCCa ttcaaagttttcttttaGTGTTTTTCTTGCCATCTCGGTGCAAAGCTGAC CTTTCAAACTTTGTaataaacaatcaaaattatcgGAAAATATCCTACTG TGGCTGAGAAATTTATGACCGTGATTTTTATTGAGGtgttaacaagcgaa aaattaAAGTCctaccgtcgttttgtataagattctcatttctgcactaa gattcttgtcagttttccggaatctttccgcTTCTTTTCCCGGCATGAAA TGGAAAGGATTTGTTTCTAAAAGTAccaaaaatcttgtgtttactaaCTT GCGAAACTACCTCACTTTCCCAAGCTTATTTGTCGACTACCCGAAGTTCT GGTCATTTTCCGTcagaaaagtggcaaaggaatcttagtgcggaaataaG AATCTTATACAAGAACGACGATATATTTTTCTCTACACAGACTCAGATTT TTACTAAGAAACAAGTTCCACCAGCAATTATATATCTATAGGCGCTTATC CATTTTCAACATATAAAAACAACTTTAAGAGAACGTCTCAACTTGTCTTA GATAGACGTTCCTTTGACGTCTCGTTTTTCGCGCTTCCccgaaaaaatct taaaaggcCTCATCCTAAAGAATATATCCCGAAAGGGCCATAGGTGAAAC TCTTAGATATGAAATGAAGCAAATCATTTACCATCTGAGCCGCGTGACCG TTTTGGCTTAAAACGCTGAATCGGAAGTTAGATATATTGCCACATTAAAA ATATACCGCGTGTGTAAACAAACTTTCAATCCGCCATTCTAATTGTGGCG AGAATCTTAAGGCTTCGTTTCTTGCTTCGGAAAGGTTAAAGATCTCACAC TCTAGCTCTTCGAAGAAGCATAAAAGGCAAATCATCCATCCGAAATCCAA AAATGTATTTTACATTTCTTCATTAACAGGCTCTGGCAATTGTTGGAGAT ATCACAGTTCAAAGTGACATTGAGAACATTATCAACACAACCATGGATAC TTTCAAACGTCTCGATGTCTTGGTAAGTTATTATTATCAACATCAAGTTA GATATTGACGAAGTCAAATCCTTTGGTATTAGATGCTATGCCAGAATGtc atgaaaattttaacatacAAGAACTTTAACTCAATAAGGTACGTTCATAT GACTAAAATTAGTACTGCGACGCATTGAgtaatttaactttttttattac GCAGGTAAACAATGCTGGAGGTTTAGTTATGGGAACATGTCTTCAAACAT CAACGGAAGATTTTGATCAAATGATGAACATCAATGTCAGGTAAACGACT TCCAGCTggttcaacgtttatctaacgttcacaacgtccatataacgtta gattaacgtttaaacaacgttgtgtgccagctgggcttgTGTTCTTTCAT TTCGTTCCTTCTACACTGGTATGTAAATTAACGAGTTCATGTATGTCTGT TCTTCTGCTACGGAGATGgatagttttttcatttttctgtccTGACTGAC TAGGGATGAAggtaaatcagcatttttcGGGTCAAAACTGAGTAGttcca aatcgtttcagtcactttaccgtcctcagggtacataaatttacaatttc acTGCAGCAAGGGTGTCGTAAGAGACGAATGTACACATCTCCAAATAAGG ACGATAAACGCCCTATTTACAATTTATATTCATCAAGCTAGTGTTTGATT TTTTGGCACAAGATATTGTCTCTTTGTCAGCTAAACAGGTCGCTTCTTGC AACAAGATGAAGAGGTACTTAAAGTGTACCTACTTCAAACACTTGATTGT CTGTATTTGTTAATATTACGCTAATTCAAATGTCACGTTTTGATGGGCTA ATGTTTACATAATGGGTCTATTTTTAGATGCTACACGTGAAGAACTATTT CTAATGCGAATCATGTACTTANGATGGGTCTATTGTTAGATGCTACACGT GAAGAACTATTTCTAATGCGAATCACGTACTTAAAGAGAAAttactacct tattacacgaatattactagtcattttattaacacgaattgaattAATTG TGTTTTAATAAAAATCCCCTTAAATAAAACCAGGCGCTGTTTCCTTGAGA AAGCAGAAAAATTCGTTAATTTCAGATTGTGagaatttcaaggccgttaa atacttgcctagtaatattcgtgtaatgaGGTATATACACAAGCTCTCTG ACTGGTCGGACCCTAATTATGTTATAGTTTTTATGTAAATTCTTGTTTCC AGATCTGTTTTTCTTATCACCAAGATGGCTATCCCGCATTTGAAGAAAAC TCAAGGTAAAAGTCAGCTCATtcatttttgctgaatcctAAAACTGAATT TCAGCAAACTTTCCCTACTACAAGAAAGCCTTCGCCATTCCAATATCTTT ATCTCTAGCTAAAATGGTTTTCCCTACAAATAAACTAAAACTTGATGGTA CCCTGAAGATAATATCAGAGTATATTGTAAaagtgaaattattttttggg gAATAAAAACCTTTGTGGAAAAAAGATTATTGTGGTGAACAAAAGCAGCA ATTTGAGAAActaatttgggaaaaaaatggccaaaaattcttttcatatc GGAACACGGCGATCTGGATTTATCGGATTAAAAAATGCCTATTTTTGGtc gtaaagaaaaaatgacgaTATTTAACACAACGAATATCCAGTGAAAACTT GAGATCTTTAGCCCTTCCCGATCGGGAATTAATTCgattccgattttgag ggatcttgatctaaaattaaacttttcaaaaatttcccgattttgaatag tttttatcaaaaaatttgttaAATCGGGCCGTTTTAAAAACAGTACTGCA ctaattacaaaaataaacttttggtttccccgatttttaaacattactct AAAGATCACCGCGGAAAAATACCAGTATGTTATGATCTTGACATTCGAGA TTGGAATTTTGAGATTGGAATTTTGAGCAATAAACACTAAATTTCTACTC ATTAAGACGTGTATTTTCTATCCCTATGGCCATTAAGCTCGTTCAAAATA TTCTATTGTACTGGCTAAATGGGTCAATGTAACAATGGTCTGTACTGGGA TAATTTAGAATGCGCCAAAAGATGTCGCGTTTATTAAAACCGTGTATTGT TTAATCTTTTAGGCAACATTGTCAATGTTTCGACCCTTGGTAGCTCGAGA ccagtaagtttttttttctcgatctcTTCAGAACTTTCAGTTGCCTCTTT CCTTTTCATGAGACCATATTCGATTCAATAAGCATGAATAGAGTATAATA TGAGGGGTGGTCAGAGcaagtttcttaaaaaattgagCTAAAATGCTAAG CAACTTCAACCCTAAgccgaaaattttcttttgttgcaGCAAATTGGAGT AAATGCATATTGTACCAGCAAAGCAGCTTTGGATCAATTTACGCGAGCTA CTGCAATTGAGTTAGGAGCTGACCAAGTTCGTGTCAATTGTGTCAACCCG AGCATTATTGCTACGGAAAATACCTCAAGTAGCAACCATCCCACAATCTC AGTATGTAGTAGttttttaatttctaaaatatttctgtaACTTGAAAATC ATTGTACAGCAGGCCCTTTCATCTAGTGCCTGTTTAATCCATTTAAAATA CAGGAAAGATTTTAGCTATAATAACTGCCCTTTGAATTccactggcggat ttaagacaatagagcaagtacgccAAAAAACATACTAAGGAGTGCAACGG TCGTTAATTGACAattaaattacaattacaaatctcttaaCCCAGTGCAC CTTGAAAAGTGTACACTTTACAGTGTGTCTCGAAAAAGATACTGTATCAG ACCACTTATATTAAGTAGAAATAGTACTCTTTTCAATTGTTTATACGATA TGATCTTTAATGTGTTGTTTGACAAAAGACATGTCTTTTAGttggcctta attattagtcggccctaatttttgTCACCaaaccaaaatttagtcactta gggccgactaaaataataattaaattttggcaatttctaaatttttagtc gccccaaatttttagtcggccctaattttagtcacctcgtcaaaatttat tcACTAAGGGCCAACTAATAATTAGattttggccatttctaaaCTTTTAG TGGACCCAAATTTTAGtgggcccaaatttttagtcagccttaattttagt caccaagccaaaatttagtcacttagggccgactaagttttggccgataa ggtaaattACAGAATCAACGAATATCGTGTATTTTTCACCAATGTTCCAA CTGTAATAGTACTGTACAAACAAAATCGATGGTAATTTCCCTTCTGTATT TAGAAATGATAGGTAAACTTTTTCATATAcgataaatattttcaactcAC AGTTCTTTTCTCGCTGTATGTGTCATATGTCCATGGTCAACTATAATAAA CCATTGCTTGAAATCATTGCGGTTAATTTCTCATAGAGTGCAATGGAAAG AAGCAAAGACGTGCACGCCCTGGGACGTGCTGGTACAGTTGACGAGGTAG CCTCAGTTATCTGTTTCCTAGCGTCAGGAGCTGCTTCATATATGACTGGA GCATGCATCCCAATCGATGGAGGACGATCAAACATGATTCCAGTCTAGAT CTTCAACAATACGATATTTACAGTCTGTAACatggattaaaaaaaaattc taccaaCAAAATCGAAGTACTTTGATTTCTTTGAACAGTGTGATTTTTAA TGTTAGCTTactattttgtgaattttttgtGGTTTTGGGTGAAGCACTCT TTTGtatattgtcaattttttcacttttctataaaagcaaatatctttgg aaataatttttttactatGGTTGAATAAGAAATAAAAACGAAATACAAAA AATTTACATGGTCGTATTAATTGATGCATCGAGAAGGAACTGAGAAGtga ataatttcaatttgaagataattattttttggggaattaaAGGGGAAGGC TCCGCTTACGCTTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039698TCONS_00039698Clytia hemisphaericatranscript
TCONS_00039699TCONS_00039699Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039698-proteinTCONS_00039698-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002170supercontigsc0002170:7024..13389 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
328.89 322.78 409.87 416.7 184.12 138.33 386.84 384.56 772.18 529.23 386.39 673.86 69.35 52.31 28.49 60.64 10.61 10.56 10.36 6.64 2.12 1.84 119.99 106.78 0.58 0.66 5.4 5.72 38.89 44.51