XLOC_023564 (gene) - C. hemisphaerica

Overview
NameXLOC_023564
Unique NameXLOC_023564
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002020:8842..12017+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023564 ID=XLOC_023564|Name=XLOC_023564|organism=Clytia hemisphaerica|type=gene|length=3176bp|location=Sequence derived from alignment at sc0002020:8842..12017+ (Clytia hemisphaerica)
TCATtgctttctatttattttcattacgtaatgtatctcaaaatggtagg taaagtaGTGCGTGATTAAACCAGTGGCTGTTTTCATGGAATTTTACTGT TGCACTAGGTTTTTGATTTATCATTTATTGGGTTAGCTTAGTTGAATGAT AGAATGTTCCATTAGTTTAACGTCACCACAACATGTTTCTCATtagcttt tgttttgatttgagaggcaCGCGCTTTAGACAGTTAGTTTTAGGTAGTAA ATTCCTTTGATCTTGCCattactttcttttttgttaaacagggcaaaatt gattttggtgctCTTTTTTACGCTAGTTTCCTTAACTGTCAAGCTCTTAC ACTCATAAAACTGTTTAACTTATTCGCATATCTTGTCTTTATGAGTGAAT CTTTTTTAATCTCcaacagtcagggaaatccctcaattgcggtataaact gcaattgcggtagttttcaATCGTGATTAGCCTACAAGGGCTTATAACAg ctacatatagtgctggtcgacaaagataaatAAACATCGACTGTAAAAAA TCGTACAAGAAGATGGTagcttttctttatcaaaagaatctgatctacgg aaaaaatattttgtctgtgcgtgcgttaaaaagatatgataaaTTACtgt atgtacaaaaattgcctgttttctccttgaatcttgaattctgtttcttg agtatactgcaattgcggtacatgaaaaatttaaaagtgacgtttatact gcaattgcagtaagaaattactaccgcaattgtgggatttccctgactgt ccAAGTAGgagaaaacaattttatataagaaaaatttttctaTTGCCAAC ACGgatcaaattttttgtaaaatctcttcaACCCATCATCGTTATGAAAC ACCAGCAATTGGGTTCATTGGTGtttcttttggtttttttatGACTTTCC CTTGTTCCTTTTTCGATTAGTAGAAATGCAAAAATCAATGTATATACTCA TCTTATAGACTGATAGATGGCCCTATCTCTCTGTCAcctttctattttct gactcCCCACAACCCTCACATTTAGCAATTAAAGAAATTCCAATTGATAT TTTCTGTATTATACAATGAAAAAGGGAGACAGAATTAGTGAGGCGGAGAG GGTGACAGAGATAGGGCCATCTatggaaatctttaaaaattaaaatttat agaTTTCTTTGCCTTGTATACTTTAAAATACATGTGGTGTGGCCAGGATT AGGCAATTCCGCAAGAGCccattttttctgtgttttgctATGAAACAATT CTTTATTTATGTCTTTTGAAATTTACTGATTCCAATTTTTCAGAGTATTT GGTCGATATCATTGAGGTCTCCAAAAGGATACCTACTTAAGCAGATCAAA TCAAAATCTAAATGAAAAATCAACCAGAAATTAGTACCCCtaaaatagtt gttttggagaacgtgacggcctattgaataaaaaatatagcAGACATAGT CATAtagaaaatttgttcatttttttaatcatttgttTCAACTTTTATCT GCTTTTATCTCAACTTTCCTGCAGGTTGATTCTTCTCTCAGTTTGATGTA TGTCTTTTTGTTGTAGCAATATTGAGCTTATTGTCGCAATACAGTTTAAA GGGAACTCTAAATAATTCTAAGGAATATCACCTAAAACTACAAATTTCTA CATAAGACATGTTATCACGTTTTTTTTCAGCCTTCAACTTCAATGTctat ttcaagaacatttttggtATAAATTAGAATAAGCCATGGAACAGTCATCA GCAGGTcagttttttattaaatttctgTAACATTTAGTCCAAAAGTCTGC TCTCCGTACTGCTCCGTAGGCTGGAGAAGATATTTTGTGTTCTTGTGTtt gcaaattaaaatttctAGTAACTTTTATTACTGACTTACCGGACatcaga cagacagacagaatttttatctaaaaataacACAAGCAAAAATTATTTGT GATCTTAGCCTTAATAATTATCCAATGGGAAACAATGACTGCATGTTTCA CAAGATAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTA TCTTGACACTATCTTGACACTACCTTGACACTACAAACTGACAGTTGAAC ATTATTAAGTTATTATAACCTTTGGCATGCAATTAAAttccaaaattcga aatttctaaTACATGTTTTCCAATACATACTCTAGATGATGATCAAGATT TTGTCTCAGCTGAAAACCAACCCAAAGGTACACAGTTAATAtctcaaaaa ctttcaatagaTTCTATGCAATTTTAGATTTGATCAGATTTGATAAATTT CTAGAattgatcaatttttttatcttttttagacTTCAAAGATGAAATTA AAGCCTGTGAAATCTTAcagatttttatgaaatgtaGAGAAGCAATTGTT CTTGAACAAGACTTCCAAGCTTTGATCAAACAAAGCTTATTCGATCCGAA CTTCCCATCTACAGGAACTCCATCTTTACTCATtgcagaaaatgaaattt tgtcaCTATCGACTTACTCAAAATGCACTGATGGTATCTTTTATGTTATG CCATTAATATTTGAAGTTTGTGGGGAAAATCAGCTATATCTAAGGTAAAT AATTTACTATCagattttcttttgtaaatattgttcatggtttcagcccc ctGGATTTCTTAAGGGCCCCTAGGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039118TCONS_00039118Clytia hemisphaericatranscript
TCONS_00039119TCONS_00039119Clytia hemisphaericatranscript
TCONS_00039120TCONS_00039120Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039118-proteinTCONS_00039118-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002020supercontigsc0002020:8842..12017 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23 0.29 0.53 0.34 7.79 5.32 8.39 7.76 7.36 7.15 10.31 10.18 8.05 6.25 1.01 2.17 1.46 2.88 1.43 1.38 3.74 2.42 1.45 1.46 14.24 18.35 3.45 1.93 1.86 1.99