XLOC_023382 (gene) - C. hemisphaerica

Overview
NameXLOC_023382
Unique NameXLOC_023382
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001963:4002..13524-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023382 ID=XLOC_023382|Name=XLOC_023382|organism=Clytia hemisphaerica|type=gene|length=9523bp|location=Sequence derived from alignment at sc0001963:4002..13524- (Clytia hemisphaerica)
TTTAGAGCCATAATAAAAAATAAATGATAACAATGATAAAGATTATACTG
GTCAGTAAATTGTTTCTTTTACATTTTGTAAACACACACTAAAAGCGCGC
TTTTTTTAATTTTTGACAACCAGAAACAGATGAAAATCGAAAAAAAAAAG
AATCAACCAAAAGTTTCACGTTTCAAGTTTATTTTCGTTTTACGAGCATA
CCACAGTCAGTACACTATGAATTGGAATAGACTTCAAATTGCTAAATGTT
ATTGTGCTGAATCGGATAAAGCACATGTACACTGTCCTTGTTCAATATGC
AGAAACAAAGCTGTCAATCCTGCTACTGAAATAAGACATCATAAAGAATT
TGAGGAACTGTTCGGGGAAAGCAATAGAAATGAATTACAACAAGTACAAG
AGAGTGAGGCAAGCATGCAATCTGTCCCTGGTCACTGTAGCAGCAATGTT
AGCAATAGTATCAACCAGTCAGGAAATTTTATTGATGAACAACAAGATCA
AGATGTTACTGAAAGTTCAGATAGTCTGCTGAGGAGGGGAGAACATGATG
ATGATGATACTGATGATGACAGTGACAATGTTGCTGATACTACTGATCAA
TCACACGATGAGAGTGCTGAGGAGAATAGAGATGGGAATATCAACGGAAT
TGCGGAACAAAATGCTAACAGGTAAAATTTAATTTTTCACGGGTTATTGT
GCTTTTTCTGTTTTCCATATTTACTTTACCTTCTTGTGCCGTCGCCACAC
CCACAGTGTATAAAAAGTTTAAATGAATCAGACCTGATCAATCAAACTTT
TTGAACAAATCAAACAATTGAAGTTCAATCAAAAATGTAATCAATTGGGC
CATTCCAGTTTTTATTCTTTACCCCCCAATGGACGACATGGAATTTCCGT
AGCAAATTGCTTTCAAGAAAGTCCGGAATTTCCGTAACAAATTTACAAAA
TACCTATCAANTATCAAAACCGTGGAATTCCGTTACTGTAACCTAAAAAA
ATCATGGAATTCCAATACTTTAATGCAAAATTAAGTAAAATTCATGGAAT
TCCGATACTTCTCTANCATGGAATTCCAATACTTTAATGCAAAATTAAGT
AAAATTCATGGAATTCCGATACTTTCTCTATAAAGTTTGCCTGGAATTCC
GTGCCAAAATTTATTTCAAAAATTGATGTCATCCATTAGGGGGTAATTTT
TTTTTTCTGGAATGGCCCATTATATCAAACTCTCATACAGTTAGCCACAC
TAGCGTCCCGCCAAAATACGTATCAAAGATTAATGCTGCGAAAGTGCTAT
ATCGTTTACTTGACTCTCAAGCAAAAAAATGCACCGCAAAACTTCTAAAA
AGGGATTCATGAAAAGATAACCCGGCGCTTTTTAATGAAATTAACATTTT
CAAAAACCTTGAGAAATTGCCTAAAATTTGAGCCATAGATGAAAAANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTCCCGGAA
ATTTTGCCGGACCTCAAACAATGACCCATTTACATGTGCGTAATTGTTTT
TACTTTAGCGTATAAACAAGGCCTTAAAAATCGAAGGGCTGTCTCGGGAA
TTGAATGACAAATTTTGGTTGGTTGAATTCTATCCCTGATATAGTCTTGT
CCGCAGTTTGTACAATATAAATAGCCGTCAGGCCAAAAAAAAAAGTAGTT
TCGTTTCCGGAAATGCGGGTGACGAAAAAAATCTCACCCGGGCGGCCGGA
AAATTTTTTTTTTTTTCAATTTTCCTAGAAAAACTCTAATTGACGTGTAC
GAAAAAATAATCCAGGTTCGATGTCTCTTTACTTGAAAAAACGAAATTTT
AAGAAGAAGCTGTACTCTAAGGTAATTCTATTCACAACTATTGGACAACT
CGTTAAATGGATCGTAAAATCGTAAAATGGAAAATAAACTCCTTATAAAT
CTTTGAATAAAATCGTTAAATGGATCGTAAAATCGTAAAATGGAAAAGTT
TTTTTCTATTTGCGGCCGGGTGAGATATATTTTTTTCCAAAAAAAAGTTC
ACCCGGCCGATTTCCGGAAACAAGACTACTTTTTTTTTGGCCTCAGAAAC
ATTATTCTGGCATGAATACGTGGCTCAGTGGATTGGGCATTTGATTTCCA
AACGACAGAACTTTGCATTTCCCCTTCAATTTTATTCCCCACCATATTTT
AAAATTTTTCGGTTCCCCTCCCTTTTTAGCTTTTGCGCCCAGTTATTTAA
CGATTTTGCAGTTCCCCCATATGGTTATAAACATGAAAATACCTTAAATC
GAGTTGTAAAGTTTTGGAAAGCTTGAAAATATAGCCTTGAAACTGCTTGA
AAATAAAGTTTTATTGAAAAGTTGGTTTGGTTCAAGTAAGAATTGCTGAT
TTTATTGCTTAAATAGGTTTTTTACAAGATTACCTTGAGATCAGTAAAGC
TCCCTGATCAAAATTTCCAATATTTATGGTTTCCCCCCTCTTTATTTCCC
CCCCATAACTAAAAAATGGGGTGCCAAAATCAGATTGAATCAGACGCCCC
CCTTTATAGAGGGGGGAGGGAGGATACTATGATACCTTTGACTTTATCGA
ATATTTCCTGTAGCAGCGCGTCAGAATCTGAAACAAAGTTTATCTCACCC
AATAAACGTGTGATTCACAGGCGAAAACCCTTTTCGTTTTCTCCAACAAA
TCAGAATGCATGTTATGAATTATTTGAGGAAACCCAGGCGAATGCTCACA
AAATAGTGGGAAAATTTAATGGGGGTCAATCTTATAGCTGGCGCTTTTTA
GTGCTTTAGTAAAGCAAAGTCAAAGTCGGGAGATCAAGGGAACAGCTCTA
TGAGAAATTATGGAAAGAGAAATGCACTCCAACCCTGACCCTAACCGATA
TAAAGAATTTTCACCCGCACGGATTGAATAACAAAAAATCTTCTTTCACC
CGTATGAAGGAGTCAGCACCGTAATGAACAGGAGTTTTATAGACCTTTGG
CTTATCATGATACCATTTTGACTTCATAGATTTTGAGTGTAGAAATTTAA
ACTTTTTGGCTGGTTTTGTATCTGTTCCAAAGTTTCAGATTATAATAAAG
TCAAAGGTTTTGTTTTTCTTGAATTGATCTCTCTCTATTATAATAGTACT
TTGAAGGAAAGTCCTAAGTTTGCAAAAGCTGCAATATTCTGTCTATATGA
GAAAAATTATTATTTCTTTTCAGAAACGAATTAGTGATTCCAAACTTGTT
GCGAACACTTATGTTGGCATCTGATATGAATGCATCTGTTAAAATGACAG
AAGAGCTCCCGGGGGGGGTACTAGGGCAAGATGGGTTACGGGGATGCTCC
GCTGGTCAGGGTACCTTTTCTAACCTCCACGAGTCCCAGGTAGGGTCGCA
AAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAGGGGGGTCCCCCCCCCCCCCCGGGGAAGAGCTAATGCAATT
TGTTGGAGACCTGATCAGTAATTTCTCAAATATAGATAACTGGCCATCAA
GCCACACAACCGCCATCTCATTGTTGAAAGGTGAAGGTCTTTACTTCAAT
CCTTTTCACCATAGAATATGTTACAGCAAGGAAAATCATCCAATACATAT
CTACGTTGTTGGTGCAGAAGGAACATGTCCAGAATGTGACACTTTGCCAA
CGGTCAATAGATATTATTTGCCAATAAAGGACAAAATGAAAAGATGGTTT
TTGTCCAATGATACCACACACAAAATGCTTGGTCACTGGCAAAACAAGGA
TGCATGGCTTGGAAAAGATGGTGTGACGTATCCCATAGATGAAATTTGGG
ATGGTTATCGTTTTAAACAATTACAATGGTTCTGGGATCCTAATTCCAGA
TGGCCTTTACCACACATGTGCTCAAATTGTCAGAACTTTATCAATCTAAT
GGATATTGGGATTCAAAGTGACGATGAAACTGAGGTCAATGTAGATTGCT
ACCACTGTGATCACAGGCAAACAATCCAACCGAAATTTGCATCTGGCGAT
CCAAGGAATCTAGGATTTATCGGTCACTGGGATGGATGGAGCCCAAATTT
TGGAAGGGGTACTTCGCGTTCTACTGGTGAGTGTATTTTCACCTAATTAG
CAAGTATTATTGATTCTAATTTATTTTATTGAGAACAAAAAAGTGCTTTT
GAAAGGCATTCAGCTAGTATCACTACTTAATTGGCAGTTGGCCAACATGC
GATTTGTGCTATTATAGCAAAAGCCACATTATTCTTCGTCCCTTAGGCTC
AATCGAGATTTCAGTTGCCAACATGGAAAAACGTTATCGGTGTCAAAATG
AGTATGTTTACACCTCAACTTTTGTTCCGGAACATTCTATGCCAAACAAA
GAACCAAATGCATTGGATCCATTTCTGGAACCTTTAGTTGATGAGTTAGT
GGAATTATTCAATGAAGGTATGAAGTTGAGAAAAAGTTCACAGGGTGTTG
AAAGCCATTTGAGAGTGGGTATTGTCCAAATGCTTTGGGTTTTCTATAAA
TATTTTAAGTATCCTTGTTGAAAAAATAACAAGGTAAATTGTAAATTTTT
TGCCTGCGATTTCATTCTTTTATCTTTTTCATCATAACTTTGTAAAACGT
TTGCCTGCCGCATTGCTTTTCTCACTCTTAATCATGTTATGTGTTCCAAA
CTTTATTTGTAAGGAATTAAATTGGTGTCAAACTTTTGTCAAGACAATAA
ATCTGGTGGGGGTCCTTCATTTTGTAATTTGGTGCAACTTTTGGAGTTTT
CCTACTTAAGAGGGTTGTTTACCTGAAAGCACAAAAATAAGGCCACCATG
CCTCCTCCAAAATAAACTTATCTCTTGATATGTCCTTGAGGGTAAAATAT
TATCTATATTTACAGACAGCCAAGAGGAAATTGAGTAGCTCTAGAGCTGT
TATATCTATACTGATGTCTTTTTCCTTTGTTTAGGTGTAGAAGTTCAATA
CCCCATCGATGTTGGTGATTTGAAGGCTGGAAAAGCAAAAATCAGGTGTA
TGCTCATCTGCTGGATAGGTGATTATCCGGCTCAATGTCAAATTGGAAAG
TTCTCGTGTAAAGGCACTTACGGTTGCCGTGTTGACAAATGTAAAGGTAA
TCTCTAAGCTATTTTACTGTATTGGTTTGACCTTTCAAAATATAAACTCC
TACATTTTTTTTATAAGCAACCCAGTTTCTAAGGGTCCAGCCCTGCATGT
TGCTGTTTGTAGGGTTATGATGTTTCTAGGCTTTGGGATTAGCTGATTTG
CTTTTCCTTGTATAAAAAGTTAATGAGAGTACAACTTTTTAGAGCCAATT
CAAAAAAAGTAACAGGCATACACAGATACATCGCCCTTCCATTCATTGTG
AATGTTCCTAGGCTACCTGCTACAAATTGAAGTTTCTGGTGTCAGGTTGT
TTTGATGAAGCCATCCTAGTTTTTGATTTGGATCTTTCTCTCTTGATCTT
TCTCTGGTATTTTAATTAAGGTTTCAGAATTACTCTTGATTATTAGTCAT
TAGGTAGTACTTTTATCTGCTTTTATAAGATAAATTTTTGGGAGAACAAA
TTTTCATTCCTCCAAAATGAAAGCTTAAAATTGTTATTGTTTATATTTCT
TGCTCAGGAGAATCAGTAAATGATGGTTCAACCAAATATTACATCAACAA
TCGCCATTACTTCACGAATCGCTGGGAGAAAAGGAATTATGAAATTGAAA
TCAATACCATGGAAGAGATAGAACAACAACCTTCCGTTTATGCAAAACTT
CGTCGTGCCAAAGAGACAGGCTATACCGGGCTGAGCGTTTTGACAAGGTT
GAATTGCTTATATGGGTTCAATGTCTTACAAGATCTTGTCCACGATGTAA
TGCATCTCGTGGCCCTAAATCTATGCAGAAAGTTGTACAAACGTATTTTT
CAAAATGAGTCCTTTGACCTAGGTCATTTCCAATCAAAGTTGCAAGAATT
TCCTTTCACTTCGGGTAAGTTTACTTTTGGACTGTAATAAGATCGTATAT
ATTATTTTCCGTTAAATTTACAGAAAGACCTTTAAGAAGAAATTTTGGCG
AATGATTGCGCTATTTTCCAATTTAACACGAATAGGCAGAGTTCATTTTG
GTGAGCCAAAAAAAATTTCAAAATTAAAACTACTTCTCTTAAATAGGAGC
TAATGGACTCCCACTCATTAACCTTCTAAGTTCTTTCAAGATATCATAAC
AATATCTATCGATCACTTTTTTTTTCATTATAGAAATGCTGGACGGACAC
TGCCCAAAAAATCCAATTAAACATTCATCCTGGACTGCAGAAGAGTGGAA
AACATTTTCTTATCCTGTGGCAGAACTCGTCCTTGCTGATTCGAATTTAG
ATGCCGTAGAATACCATTTGGTGTGGCTGACTGCGCGTATCGTTGAATTG
CTGTTCCATCACAGAGCAGGGCTCAAAAGACATGAGGTCGAAACCCTGAA
CAAGATATGTTGGCGGAGGTTAATCTTTCTTGAAGAAGAGATCGGAAAAG
AACAGTGCGTTATCACAGCACATAATTCGCTTCACATTGGGGAAAACCTG
GAACGCTTTGGTCATTGCGACAATACATGGTGTTGGGGTCCTGAGCGAGT
TGTGAAGCGGTAAGTGATCCCGTTCTAAAGATAAGCATTTCTATCCAAGA
TGTTTTTGGCAATATCTGTTTTATACTGTTAGCGTTTAAAAGCTATTAAA
AATTTCAAAAATTACTTCCTCAGGTACAAAGATATTCCAACAAATTTTAA
AAATATCGAGGCATCGTATGCTAAGCAAGAAATAAAGCGTGAGATACTGG
CTATAGAAAAGAAAAACCGACGCATCACTCACAAAACCGATCGAGTCAAC
GAGGTAAGTTCAGTTCGTCCTTTACTCGAACCAGAGAGATATAATAAAAA
CTAGTTGTGTAAATTGTTGTATCCGGGATGGTAAAATTGTAGACTCTCGT
GAAAAGCTCTTCAAAGTACATACTTACTTTAATGGATAAACTTTTGCGGG
AATTAAATTTCGCGGATTTCCCAATGGAAATTTGGATGGGACCTCTTCCG
CGAAATATTTCAAAACAAAACTCAAAATATGTCAGATAGATACTATTTGA
ATGGTTATGCATCAAAGAAGCGTTAATAATGTGTATTTCAACAACATGAT
TTGGCAGTAAAAGCCACAAAATCGTGGAAATATTGCCACCAAATAGTGCC
TTTCGCGAAATCTAATCCCCGCGAAAGTTTGTCCTATTAAAAGTAAAACT
ATCATCATATTTTACAGATTGTATCCAGTTTGGAAGGTGCCAAAATGTTA
TGCTGTAATGGAGATAACAATCCAGTGGTGGTTTTCATTGGCTCAACTTC
AGTAACCAACGTCAAAATAGTCGATCAAGCTCTCCAGGAAACATTAGATT
TTCTCGATATTGGAGTTTTCGCAGTATATCAATGGTTCAGGTCCTGTTAC
CTAAGTACACAACAATCTCACCTCAAAATTGGCTGTTTCATCATGTTTCG
GGATGGTATCATTGGAAAGATAAAGGAATTCATTTTTGTTAAAAACGAAC
ACGCTTCGGTAAAGCTGATCAGAGTTGAAAAATTCGAGTTTGATGATTTA
AGAGTGCGAGAGATCAAAACCGTCCAGCCGACCGGACAGGAAGATATTAA
ATTAGCAAATGATGTTCTTCGGAAAGTAATTGTTTATACATTGAATGCTT
ACATGTTGTTTTCAGACTTTGATAGACCCAGTTTCGAATTTAACTATGAA
GTTTTATAAGTTTTTTATATACTTATATTTATAAGAACATCTATGTCATC
AACTGTCATCGTTTAATCTTTTTGTTTCGTGATAAGTTGTGGATGGTTTT
AGTCATTGTTTTAAAATTTTGGATAGCCGTAATATCCCTCTTTATCGTAG
AGATTTTGGCTAAAATTCAATGATCGATATTGAGTCACTTGAACTATGAC
TTTAGTCGGCCTTAGTCATATTAATTTGTTCTTGTGATTATGGATATTAC
GACTATCAATTACAGTCGATGTACTTATAATTTATTGTTAATTTCGAGGG
AATTTTCATAATAGCTGAAGGCTACTTTTGGTCAGCACCTCTTAAACCGA
GTTTAATTAAATTAGGATTTGTTAGCCAAGTATACTTGAAAACTGACGGG
TAAACGCTTGGACGTGACGAAAAACAAGACACGTGTGAGGTGGGGGTTGG
CCGTACTTTTCCTTCACAGCAAGTCACTAAGCAAGTTTTTAACTTCACTT
GCCCTCGGTTGGTTAAATATTTACGGTCAACCTTCATGGAGCAGGTTGAA
ATTCAGCTGGGCTCCGTGTTCGTTGATGGCTGTCTTTACGGTTCCCGACG
GAATACCTTCCGCCAGATCCTAATGTTGTTCATTATTCTTTGGAGTAATG
ACGTAATGCTTCGGTGTCAAAAAACACATTTCAATACAGGTTAACTGTAT
TTACCATATCAAAAACAATCTTATTTCAAAGTCTGACCCCAAATCATAAT
TGTACTGAAACCATTTCACTCTTTCTTAATTAATAGACCAGTGAGGGTTT
GAACGATCGAGACGTCTAGTTTTGCTTTTTCTAGATCATAACTGGATGAG
AACTACTGTTCAAAAAAATCTTTTTATCGCTTACAACTTAGCGGTCGATT
CAAAACTGGGTGTTGTCTTACATCGCTACAGCCGGCCTTCCTACTCAAGA
CATGCATGCATAGACTCGCGACTAGCTCAGCGATGACAGTCTACGTTTAG
GTACATATTTGTAAAATAGGGTTAAATATTGTGTATAAGTATATCTTTTG
TGACATAGTTTATCCTTTTTATTAATAATGTTAGTATATGTCATGCGATT
TCTAATTTTTAAAATGCAAACGTCTGTTTGAATAGCCCTTTTTTTAAATG
ACGTCACGGACATCATTTGCCTCGTTTTGAAATTATTGCCATGGTGATTA
ACTCCCAGCGGATTTTATTAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038914TCONS_00038914Clytia hemisphaericatranscript
TCONS_00038913TCONS_00038913Clytia hemisphaericatranscript
TCONS_00038912TCONS_00038912Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038913-proteinTCONS_00038913-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001963supercontigsc0001963:4002..13524 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.78	4.24	1.7	0.84	68.68	47.67	8.79	8.98	3.6	8.24	4.04	3.17	2.68	2.18	6.84	4.85	6.87	4.23	1.29	2.76	2.11	2.01	1.79	2.95	3.7	4.87	3.32	1.21	1.58	1.87