XLOC_022577 (gene) - C. hemisphaerica

Overview
NameXLOC_022577
Unique NameXLOC_022577
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001729:19903..26119+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022577 ID=XLOC_022577|Name=XLOC_022577|organism=Clytia hemisphaerica|type=gene|length=6217bp|location=Sequence derived from alignment at sc0001729:19903..26119+ (Clytia hemisphaerica)
AGGGGATGATCAAATTTGTGATCAGTTTTGCACAAGCATCGATTCGTCAG CTTCAAATCTTAGGTTACAACGAATTTCATGTTTGATGCAAACCAACCGA TTTGAgtcgtaatttttttttcattttcaataaaacaacaGGATTGTGTC GTATTTATTTTTGAGTATTACATCTTTTTGGATTTAAGAAGAAGAACAAT GGAGTTTTTGAGTTCGATTTTCTTTTTGGTGTTACTCAACACATGTAAAG CAATGCCCAAAGGTAGGCGTAATNAGAACAATGGAGTTTTTGAGTTCGAT TTTCTTTTTGGTGTTACTCAACACATGTAAAGCAATGCCCAAAGGTAAgc gtaaattttttttcaaaaactcgaAACCGGAAAATTGGCTTCAGCATAAA CCCTACCTTTGTCAGgagagatttttttcttttttataaaacagCCTAAA GCCGGTTTTCCGTCGAGTATTTTTTCGCGCAGAATGAATTTTTCTTGAGA TTAATTTTCATCTTGAGGTTATTCTGAAAAAAGTATTCCAACGTTCTATT TTCAGCGTAGCACTAGACTAGAAAAGTAGTACatggttttattttcattt tgcgCGCGATTCTTTTATCCCAGATGACGTCAAAATTATATACTGCGCAC GCATATCGGTCGAAAAATTCACCCCGCGCGGACGCTTTAGCCAGTACTCA GTAGTACTGCTTATGGAGTAAGAACATATTGAACGAATGAAataatgaac attttctttttcacagcCAACGTGACGgcagaaacaaacaaaacaatgaA CAGTATCTCACTCCAACAATCAACCAATCAGCGATTAGTATGCAACGTTA AAGGCCTACCAATCAACAAATCCTTCAAACTATCATGGTACAAAGGAAAC GAAGCATTATCAAAGGAGACTTTCAACAACACGAAGAATGAGCACCAATT TCAGCATGAATTGGGAAAGGGGCCTGAGGCGAGTGGAGCATATCGTTGTG AAGTTCGAGATGAGGAGGGAAGCATTTTGAGCAGTGAGAGTGTGATCATT CAAAGAGATTCACCTTGTAAGTATGGGTGATCTTGTTTTCTTTTGCCTGA GCTGAAGTTGTAGGCTGTACACTgcactgaaaatcaaaataaacgaaCTG TATAACTTGCCGTTCGATACACAAGAGTCACAACATTTGTGCGGTTTACT AAGTTGAGAACTTGAAAATTTCCACTAACATTCAAAAAGGCTTCATTGAT TGTTTCACCGTACTGAACGTGCAGAaagccttttgaaaaaagtcggAAAA GTAAAAACAATAACACCGACACATTAAGTGCTTACCACCTTTTTACCAAA AAGTGAGAATGAAGTATTGAAAACTGTTTTGCAAAAAGAACTACTTAGTG CATTCATTTTTAGGGTGAGGAGTTTTGCCTGCAACGTCACTTTTTTTGGC CATAACAAGTTTCAAATTCTACTTTCGAACTAACCACATGCGGTTGCACC CGGCTGCGGATTCAAGGGTTGGCCTCCAACTAatattacttatttttctt tttccagatTTGACGATCAAAGAGAGTGCTACGATTCCTGTCATGAACAT CCGTACCAACGAAACGAAACAGACACCGTTCATCATTGAATGCGCCGTAT CGTCATTCCCACGTGCTAACGTCACCTTTACACGTCTCGGCGAACTACTG AACAACACCAACCCTCGTGTGGAGGTGACGGTGACTGAAGACGGGGATAC GGTTACATACACATTGACACTCTCTAGCGTAACTTTCACGGATGCAGCGG AATATTTTTGCAGAGCTTCGAATAGAAACCAAGGACAGCCACAGAAAATG AAAGTTGGGGTCATTCATTTAGCTGGTGAGTTTAATGAAATCTATGAAAG TACTAATAATGCTTAAGGGTTCAAACAATTGCCTAGTGGTCTAAAGCATC TGTTTCATAAACTATGGGGGGGGTCTAGGTTCGATTACTCGCTTTTCGTG CTTCTTTCATTGAGAACTGGTTGGATGGaccaaatcaaaataatcgAAAA GGGTCCTCGCCCCTTTTATCTACTCAATCTCAACATAAAAATAGTAGCGT GGAATAGAAATGGATAGAATTTTTAATGagcaatcttttcttttcttcat aGGACAAGAGTGTTCGAACAATTTGATCGAAGCATCCAAACAATTGAAAT GTCCAAACCAAGAGAAATGTATCTCCACAACATTGTGTGGTAAAACATCT CATGAACAATGCAAACTTTATCGGTGTGGTAAGCGAGCTCtttgaaataa atattattCTCAGTCGAAGGTctagttgactctctctaattcgacgttct actatttgaCACGCTACATAACTTGATACTATTGAAAGCCACCGTCAAAC TCTCAGAAATTCTCATAAACGAAActctactatttgatacgctctcttat tcgatgaaaatccaattccctttgaacatcgaattagagagtgtcaactg tagtTAAAAACTTGAGCTAACTGCTTTACTTTACGGAAAAAACTAACAAA GACAAACTTTACCAACATTTTGATTCGATgtgaatcaatcaatcaacatC CTAGGGATTTTTAGTGCTTGCCCTTGAACAGCAAAGACAGATTTACCAAA TGTTTTACGAATGAAAAGTTCAATTtagtttcattttcattcatcagAGC GTCCGAGCACACCACAAGAAGCCAAAGTCGTTCGATGCACTCACAACGCC GTCGAGTTACAATGGTCACCAGACGAGCGCGCCAATAAATATATCATTCA CGTCTTCTCGTCTTACGGCGACAACTACGTCTTACCAACCAACGTTAATC GTATCGTTGAGAACGGCTTGCGTTCGAACCAGGAGTACACGTTCATTGTT GAAGCTATGAATGACTTTGCGATCAGTGATGCTACCAATGTTTTGAAATG CAAAACTAGACGAATGGGTGAGTAGATCCCTCTAACTCTAACTTCCAAAT TACACTCTCATCTCATCTTATTTTTGATACTCATGAAGTAATGTTTACTA TGGAGACACCCTGGTTTTTACCAGAAATAGCTAACTTCAAACAATTTCAC TCTTGCTAAAATTTTGCCACTAAAGCCAAAAATTGGGTGTTTGCGTAGAA AACATTATGTTGTGAGTATCATGAATATTGTAGTCACGCCGTAACATTCA CTTTTAACCGTTGGATTAGACACGTGCATTTTGTAATGCCTAATTAAAAG ATAGCTTCATCTTTTCCGATCTATAACTTTGCCAATGAGTATGAAACTAA TGAACGAATAGAAGAAAGTATAACTAACGAATGAGAGGCACTGAAAATAA GACTGAGTTTTCAATAATCTCTTCTCTTTGACAGAGCCACCATCACGTGT ACTGAACACCAAGGTAGATCGAAACAATGAAAACGAGGTCGTGTTGAGAT GGGATTTACCGAGAGATGATGGTATGAAGGCGGATGAAACGGAAGTCATT ANTTGACAGAGCCTCCATCACGTGTACTGAACACCAAGGTAGATCGAAAC AATGAAAACGAGGTCGTGTTGAGATGGGATTTACCGAGAGATGATGGTAT GAAGGCGGCTGAAACGGAAGTCATCGGTGAACTGCAATATgaagtcaaat attgtccacaACAAAAGGTGAGAAGGTCTTTTTCTTCCTTACTAAGGCTG ACTTAAATAGGAGTCTACCGCTTTGGAAAAGTTTACAAGGTCTTAACCTT AACAGGCATTCAATGAGAATTTAAAATGAGTATTAGACTTTGCTTCAAGC TGACAACATTACCACCAGACTTCTtcagaaatgaaaaaagaactttaaaa atgtttaaaatatcaAAGTGAGGATTACTACTACTACTGAATCTGACTCT CCTTCTAATTGACAGGTCGGTCAAGATTTATTACAAGAATGTAAGAACGT CACAACAAAAGAGACGTCACTATCACTTCCGTTGGACGTCAATGTCGACG TCGTCTACAAATTCACCGTCATCCCTATCAACGGCGGTGGTGTCAAGGGA GAAGCACATACTACAATTCAAGTCATCCCAACAAGTAAGTGTCTTCACAC TTCAGTTCATTTACTCCCTTCCATGTTtcattcttttcaatttcatattA CTTCCTTAGAAAATCTAGATGCGTACgcatatttttgatttttaataagA CCTAATTTAAGCTTCTTTCTTTTGCATTCTGAATTCTTGAACGATCTATT GTCGCTGTCCAGACCAATAACGTTTAGGCGAAGGCTAGGGTCGAATCTCC TACGTAGTAagatttgaagccacttatttcctacaTATGTTGCGCGGCCC ACATGGTTTCATACATACAAATAGTGGTTTGGAAATAACATTTCCCAGCG AAAACAAAAAGAAGTGGTAGGTTCAATCCGTCATCTGAAATGCAGCACAA ATNcgaaaacaaaaaaaagtggTAGGTTCAATCCGTCATCTGAAATGCAG CACAAATTTCAAGACAAAACTTTTGCTTGCCCGAGATAAGTTGAAGACTC GCCTCTAGCTTTTggtttgaaactcaatggtcctGACTGTAAGTAGCGAC AAGAATCTCATCAACACAATCTTACGCACAATATTCTAATATCTGAAAAA AATAGTTAATAACTGAAAAGACTAACCTTGAACTTCGATTTTTGGTCTTT CGGCTACACCAATCAAGTCTAGAGAGAAATGGATTAAacaattcttcatt ttctttttcagacgATTCAAGAATCTTGAAGATGGTGCCATCAGTGATCT TAGCATGTTTGATTGTCTCCTTACTGCTGACATCAAAAGAGTTCCTTTAG TATGAACACCGAGAGGGAGATAAATAAAGGAACACAGTCAACAGAGGTGG AGGGAGAGAAAGCTGATGTACAAGCGAGGATGTGCACATATGCTAAGAAG ATAGCAGAGTTTTGAGCTTTCAAATGACGAGATAAAGTAGTCTTACATTA ATCTAATGATGACGTTTCTATCAAATTTTAAACGATTTGAATCACGatgt ttgagaaatttatacgtTTTAGATATTTTGCTACTACTGGAGTAGCTAGA AGTTTTTGAGtagaaaaaactgatttttttgtaTATTATGAAACGATTAT TGACCATTTTGAAACATTTCTAAAGtgttaaaaataacaaagaacGATTT TGAAGTCTTGTGTCTTTTCATActaaaatacccaatttctgAAGTTGCTC TTtgatcaaaattacaaaaatttacaaaaagacTTGACTTACAAAAAATA TAACATAATGTGGTTTCTGGGGAAAGTGGCAAGAACAACCGAATTTCCAC ACTACTATAtaagatttttgagaattttggccTACAGAATACATATTAGT AaggttaagtatcgatagaTAAATCACGACGACGTACGAATTTTCTCTAG CCTTCATTCGTGCCACGGCACTTTTCTACAGGCTGATTGGAAAGCAAGCT AGACTTACCCCGCaatgaaatcaactttgctTCCAGAACGAATTTCCGAT TGATTTTCCGTTCTAGAAGCAAAGCGGATATAATACACGAGATAAGTCTA GCTTGCTTTCCGATCAGCCTGTAAAAAAATGCCGTGGGTTGAATGAAGGC TATagaaaattcgtccgtcgtcgtgatttatctatcgatacttaacctca ctattattCACAGTAGAACAGTTAAAACGTAGTAAGTCAGCGTTTTAaca ctaaaaatagaaattacCTAGTCTGCAAGGAAAATGACTCAATTAAACTT CCGAAAATCAAAGATAAAACAGCTCGAAGCCGGTCGGTTAAAGTTAAACG TTATTTACTTTCCCCGTATTgggcttttcctgaaaatgttcgtacatggg ggggggaATAATTCTCCGGGGGGtccttgctctgtttgggggtaattttg aatcTCCAGGGGGTcaaacagggggggggtcagtgtaccagaTGGTGAca tgtatcctggggtgggtgggtgtttgagaaaaaaattaccctgtgtacta taattggagtgttgggtccaaaatcgattttgaattttactacctgtgta ccaaaataggggtgttgggtccaaaatcgatgttaacagtgtggaaacaa aaaggttcagaataaattatctgctaaaatagaaatgtaaatttgttcta ttataaattgatcaagc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037870TCONS_00037870Clytia hemisphaericatranscript
TCONS_00037871TCONS_00037871Clytia hemisphaericatranscript
TCONS_00037872TCONS_00037872Clytia hemisphaericatranscript
TCONS_00037873TCONS_00037873Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00037871-proteinTCONS_00037871-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001729supercontigsc0001729:19903..26119 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.35 0.38 0.26 0.5 0.41 0.53 0.43 0.66 2.11 2.01 1.97 1.7 65.71 92.47 42.49 18.26 6.4 7.63 33.22 26.82 21.37 23.07 6.17 7.04 7.5 11.21 16.67 10.29 0.71 0.81