TCONS_00037871-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00037871-protein
Unique NameTCONS_00037871-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length497

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00037871-protein ID=TCONS_00037871-protein|Name=TCONS_00037871-protein|organism=Clytia hemisphaerica|type=polypeptide|length=497bp
MEFLSSIFFLVLLNTCKAMPKANVTAETNKTMNSISLQQSTNQRLVCNVK
GLPINKSFKLSWYKGNEALSKETFNNTKNEHQFQHELGKGPEASGAYRCE
VRDEEGSILSSESVIIQRDSPYLTIKESATIPVMNIRTNETKQTPFIIEC
AVSSFPRANVTFTRLGELLNNTNPRVEVTVTEDGDTVTYTLTLSSVTFTD
AAEYFCRASNRNQGQPQKMKVGVIHLAGQECSNNLIEASKQLKCPNQEKC
ISTTLCGKTSHEQCKLYRCERPSTPQEAKVVRCTHNAVELQWSPDERANK
YIIHVFSSYGDNYVLPTNVNRIVENGLRSNQEYTFIVEAMNDFAISDATN
VLKCKTRRMEPPSRVLNTKVDRNNENEVVLRWDLPRDDGMKAAETEVIGE
LQYEVKYCPQQKVGQDLLQECKNVTTKETSLSLPLDVNVDVVYKFTVIPI
NGGGVKGEAHTTIQVIPTNDSRILKMVPSVILACLIVSLLLTSKEFL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_022577XLOC_022577Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00037871TCONS_00037871Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR007110Ig-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 141..213
e-value: 0.0026
score: 27.0
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 272..346
e-value: 0.0018
score: 27.5
coord: 362..456
e-value: 3.0
score: 16.0
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 364..471
score: 8.537
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 271..362
score: 10.202
IPR003961Fibronectin type IIICDDcd00063FN3coord: 272..356
e-value: 5.38321E-6
score: 43.2539
IPR003961Fibronectin type IIICDDcd00063FN3coord: 362..466
e-value: 7.14851E-7
score: 45.9503
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 270..455
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 270..358
e-value: 1.2E-11
score: 44.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 359..471
e-value: 2.0E-9
score: 37.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 128..240
e-value: 1.1E-12
score: 47.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 18..127
e-value: 1.6E-7
score: 30.8
NoneNo IPR availablePFAMPF13927Ig_3coord: 137..210
e-value: 7.9E-8
score: 32.7
NoneNo IPR availableCDDcd00096Igcoord: 147..212
e-value: 1.84797E-7
score: 47.4839
NoneNo IPR availableCDDcd00096Igcoord: 44..111
e-value: 0.00945703
score: 33.2315
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 20..115
score: 10.608
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 121..222
score: 9.464
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 150..212
coord: 32..99

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037871-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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