XLOC_022470 (gene) - C. hemisphaerica

Overview
NameXLOC_022470
Unique NameXLOC_022470
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001702:29270..33233-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022470 ID=XLOC_022470|Name=XLOC_022470|organism=Clytia hemisphaerica|type=gene|length=3964bp|location=Sequence derived from alignment at sc0001702:29270..33233- (Clytia hemisphaerica)
GGATGACAAAAACGTGCAAAGAGCTACTGGCCACAGAGGGAAAATTGTTG
ACACTTTTTATGATTCTGTCAATATCTGGTAATGTTATCATGGTTTCTGG
TGTGCTGCAAGAGATTACGATTGGGTTTCTGCACCCTGGCTTTTCAAAAG
CATTCAAACTAAACAATATCAAAGGAGGTCTGGTGAAAGTATTAGATGAC
ATCAATAATAGGGATACCATTTTGAATGGCATCCGTTTGAACGTAAAACT
TGCTGACTCAGGATGCGACGAAAGCATGGCGATCGGGTCGGCAGTCGATC
TTTATAATGCGGGCGGGAAAGCAATGATTGGACTAGCCTGTTCAGTTTGT
TGTCTTTCCGCTGGCTTACTATCGACGAGTAAACAGATCCCTTTGATTTC
CTACTCCTGCTCTTCAATTGAATTATCAAATAAAGACAACTATCCATACT
TCGCGCGCACAAAACCTTTCGCGCGTACAGGACCATGGGCAACGAGAGCG
CTTGCAGCAATCACGAAAAGAATGAACTGGCGTCAAGTATGTATCATTGA
ACGTGTTCACGAAATTTATACGCTGGTATCTGAGAATCTACGAGAAGAAT
TCTTATCACAGAATTATACGGTCTACCGAGAGAGATTCTATTATGAAGAT
ACTACTTTCCAAGAAAAAGAAGAATATCTAGCCAGCTTGCAAGACAGATG
TAGAGGTGAGGACGTCACGGCTTTTATTTTTACGCAGTAACGTCTATTAG
ACTTTTTCGAATGTTTTTTGAGTCCAGATTTTAATTTTTGACACCACTTT
AAACTTTTGAAACTCCTGCAGTAACGAATAAATCGGATTTGCATATCAGA
ACACTTGAAAGGCTTCTATTTTTCGAAAATAGTCTAAGTGGAACTCACCA
ATAAGCGGAATGAAAAATAAACGAATTCATGTAGAAAAGCGCTTTGTTAT
GCAAACGTCATTATTATCACCTCTCTTATTTGACCGAAATTCAATCACAT
CCTCCTTTTCGTCTTAAGTAGGGAGCTTATTTTGGCAGAAACTAATTTTT
CGCGAATGACAGTAAAAATCTGTTCTTTTTTGCCTTATTTGGAGCTTTTT
TTGTGAACTCAAGAAGTTATTTTGGTGAGTGAGCAAAAGCTTTATTTTTG
ACAGGAACTTTCGTCTAAATTCGCAATTAACTTTTTGTCTAAATTCGCCA
AATTCGCCAAAATTAGTTCCCACTAAGATAAGTTCCCTTAAGGTAATTCA
AAAGTCGTGAGTTTAATTTACATGCAAGCGTAATTACCACAAAGTTCGAT
GGGATTGAATTCAAAACAAAAAACATATCTATTTTTAGATTGGCCACGGT
ATGCTACTGTCCTAAGATCTTCACTTTCATATTAGTAAATTCTCAACCCT
ATGAAAAAACTACTCGCTAATTTATCACACCCCTGTACTTGAAAGTGCCA
TTTTTCATCTGAATTCCATTGTTTTTGAACCAGAAAATTCAGTGGGGATG
GAAAGAATATCACATATTTTGCAGTGAGGATTTGTTTAAATCTAATTATT
TCAGTGGGGACAAAGATTAGAGCATAATTGTCCACTGGAGACGATATTTT
GGCCAATTCTTTAATAATAATAGGAAGGGGTCTTAGTGGGTCTGTGAGAA
GGGGGTGTACTATGATAAAGTGCAATAAATAGCACACTCCTGTCTTTAGA
AATAAGTTTCATCGGGAAAATAAGGAGTCCTATAGCAGAATNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTTCTAGT
CACTTATAATTACTCGTGTTCAGTGCTTTCGAAATACACGGCAATCCATA
TTGAATACTTTGATTCCCTAGTTTGTTCAAAAAGAAAATAAGTTAAACTT
TCGTATTAGATATTTTCAGTTTTTTAGAATTGAATTCTGATGGATATGGC
AACGTGATAAAAGTCTGGCATGGAGTCAAAAAAAAACACACGGGGTTGAC
TTTATAACACCCCTTCTCACAGACCTACTGGGACCCCTTCCCACTGGAAA
AAATGGCCAAAATACGGTCCCAAGTGGAAAATTATACTCTAATTTTTGCC
CCCACTGAAAAGACTTAGATAAGCAAATCCTCGCTTTAAAATATTGTGCT
ATGTTATCCATACCCACTGAAATTTCTGACTCAAAAACAATGGAATTCAA
ATCCCCGGCGATGAAAACCATGGGAATATCAATCACCATCGAGTTTTGGT
CTGTTATCTTTACCCCCACTGGCTGAAAAAAAATCCCACCGGGTCTGTGA
GAAGAGGGTGTTTTATATGATGATACCACCTTGAATATTATTTTCATTGG
TTGGTCAATTTTATTCTGAGAAAATAATTCTTGCTTTAATTTCTTTCTTC
CAGGTGACGTAACCTTATCTTTAGCGAAACTACCGTCACCGGCAAAGACA
GCCAAACAGTGTAACTTGGACATGTTGGAGACGAGCGCGAGAGCTTCCAT
CTTTAAGATCAAGAAGTGTCGTGGTTGGTGGCCATTCCAAGTTAACCCTG
AAGACGATGATGATCCAGATCCCGTACTTGCTGTAAGAATATCTTTATTC
ATGATATATGCACCATTGCAATGTCTTCCACGGACCCAACAGCTGATTGG
TTGAAAGTGACGTATTGGCTGATTTTACGTCACTTACAGCCAAACAGCTA
TTGGGTCCGTGATGTAATGTCAGAAGACATTGCAATGGTGCATGTCATGA
ATAGAGGTTTTTCATGTTTGGAAAGCTATGTAATTTCCGCCATTATGGAA
GCGGACGTTCGATTTGCGTAAGGGATCGCCTCTACAGATTCGAAAGTTTG
CTTCCATAATGACAGAAATTACGTAACTTAACGAAACATGAAAAAACCTC
TAGAGATTTTATGGCGATACCGATCAGAACTACAGTGGGCATCTAAAACT
CGAGGTTCCCTTCAAGGAAAAATCTCAAAATACTTTCAATCATTAAATCT
CAATGTAATTTGATTAATAGAGAAGCTTTACGATCCACAAAAATTGACAT
TTTATAATGACCCTATTTTGTGAAATTTCCCCATGATATACCCATCCTCG
TTGTTTAGCCTACCCTTGAGAACGAAAAGAGTTCAATATTGTTACCTTTC
ATATTTAATCTTTGTACAGGGAAAAGTGGAAGCAGAGATCGAGTTGTTAG
CTAAAGAAGATGCGGAAGCAAATCCTGTTGGAAAGAAGCGTGAAGAACCA
CAACCTCTCGAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037739TCONS_00037739Clytia hemisphaericatranscript
TCONS_00037738TCONS_00037738Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00037739-proteinTCONS_00037739-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001702supercontigsc0001702:29270..33233 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.25	0.33	0.85	0.97	0	0.56	0.29	0.24	0.14	0.19	0.19	0.05	0.28	0.17	1.7	1.77	0.08	0.56	1.75	1.4	0.17	0.38	0.38	0.67	0.82	1.06	0.17	0.36